assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001186215.1_ASM118621v1	NZ_CP011516	Edwardsiella sp. LADL05-105 chromosome, complete genome	1	911911-912793	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	Type I-E	GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC,GTCTTCCCCACGTCCGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	13,14,14	14	TypeI-E	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	NA,NA|200aa|down_2|NZ_CP011516.1_918095_918695_+,NA|61aa|down_4|NZ_CP011516.1_919109_919292_+,NA|121aa|down_7|NZ_CP011516.1_921961_922324_+,NA|59aa|down_9|NZ_CP011516.1_924177_924354_+	NA|139aa|up_9|NZ_CP011516.1_901950_902367_-	pfam00872, Transposase_mut, Transposase, Mutator family	WYL|335aa|up_8|NZ_CP011516.1_902617_903622_+	pfam13280, WYL, WYL domain	cas3|882aa|up_7|NZ_CP011516.1_903649_906295_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|495aa|up_6|NZ_CP011516.1_906298_907783_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|175aa|up_5|NZ_CP011516.1_907779_908304_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|212aa|up_4|NZ_CP011516.1_908300_908936_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas7|348aa|up_3|NZ_CP011516.1_908948_909992_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|238aa|up_2|NZ_CP011516.1_909995_910709_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|293aa|up_1|NZ_CP011516.1_910712_911591_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|NZ_CP011516.1_911571_911859_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|195aa|down_0|NZ_CP011516.1_916736_917321_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|175aa|down_1|NZ_CP011516.1_917268_917793_+	pfam17550, PsaF, Family of unknown function	NA|200aa|down_2|NZ_CP011516.1_918095_918695_+	NA	NA|110aa|down_3|NZ_CP011516.1_918742_919072_+	pfam01476, LysM, LysM domain	NA|61aa|down_4|NZ_CP011516.1_919109_919292_+	NA	NA|414aa|down_5|NZ_CP011516.1_919331_920573_+	COG3969, COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only]	NA|214aa|down_6|NZ_CP011516.1_920557_921199_+	cd16397, IbrB_like, immunoglobulin-binding regulator IbrB activates eib genes	NA|121aa|down_7|NZ_CP011516.1_921961_922324_+	NA	NA|68aa|down_8|NZ_CP011516.1_923775_923979_-	pfam04986, Y2_Tnp, Putative transposase	NA|59aa|down_9|NZ_CP011516.1_924177_924354_+	NA
GCF_001186215.1_ASM118621v1	NZ_CP011516	Edwardsiella sp. LADL05-105 chromosome, complete genome	2	1006823-1006980	2	CRISPRCasFinder	no		cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	Orphan	AAAGATGGCATGAAGAAAGATGGTATGAAGAAAGA	35	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	NA|60aa|up_2|NZ_CP011516.1_1004674_1004854_-,NA	NA|443aa|up_9|NZ_CP011516.1_996447_997776_+	PRK02991, PRK02991, D-serine dehydratase; Provisional	NA|290aa|up_8|NZ_CP011516.1_998677_999547_-	PRK15050, PRK15050, 2-aminoethylphosphonate transport system permease PhnU; Provisional	NA|370aa|up_7|NZ_CP011516.1_999549_1000659_-	TIGR03258, PhnT, 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT	NA|338aa|up_6|NZ_CP011516.1_1000664_1001678_-	PRK15046, PRK15046, 2-aminoethylphosphonate ABC transporter substrate-binding protein; Provisional	NA|241aa|up_5|NZ_CP011516.1_1001821_1002544_-	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR	NA|368aa|up_4|NZ_CP011516.1_1002684_1003788_+	TIGR02326, 2-aminoethylphosphonate--pyruvate_aminotransferase, 2-aminoethylphosphonate--pyruvate transaminase	NA|270aa|up_3|NZ_CP011516.1_1003796_1004606_+	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional	NA|60aa|up_2|NZ_CP011516.1_1004674_1004854_-	NA	NA|200aa|up_1|NZ_CP011516.1_1005299_1005899_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|263aa|up_0|NZ_CP011516.1_1005908_1006697_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|450aa|down_0|NZ_CP011516.1_1007173_1008523_-	PRK09228, PRK09228, guanine deaminase; Provisional	NA|338aa|down_1|NZ_CP011516.1_1008698_1009712_-	PRK15345, PRK15345, SepL/TyeA/HrpJ family type III secretion system protein	NA|222aa|down_2|NZ_CP011516.1_1009704_1010370_-	TIGR02499, translocation_protein, type III secretion apparatus protein, HrpE/YscL family	NA|185aa|down_3|NZ_CP011516.1_1010366_1010921_-	pfam13327, T3SS_LEE_assoc, Type III secretion system subunit	NA|84aa|down_4|NZ_CP011516.1_1011640_1011892_-	TIGR02497, hypothetical_protein_CV_2587, type III secretion apparatus protein, YscI/HrpB, C-terminal domain	NA|89aa|down_5|NZ_CP011516.1_1011888_1012155_-	pfam06287, DUF1039, Protein of unknown function (DUF1039)	NA|74aa|down_6|NZ_CP011516.1_1012159_1012381_-	pfam09392, T3SS_needle_F, Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	NA|231aa|down_7|NZ_CP011516.1_1012399_1013092_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|75aa|down_8|NZ_CP011516.1_1013176_1013401_-	pfam08988, T3SS_needle_E, Type III secretion system, cytoplasmic E component of needle	NA|395aa|down_9|NZ_CP011516.1_1013411_1014596_-	TIGR02500, Yop_proteins_translocation_protein_D, type III secretion apparatus protein, YscD/HrpQ family
GCF_001186215.1_ASM118621v1	NZ_CP011516	Edwardsiella sp. LADL05-105 chromosome, complete genome	3	1728477-1728570	3	CRISPRCasFinder	no		cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	Orphan	GTGGTGGAGTCTCTGTATGCCGCG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	NA,NA|59aa|down_9|NZ_CP011516.1_1740849_1741026_+	NA|643aa|up_9|NZ_CP011516.1_1717531_1719460_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|143aa|up_8|NZ_CP011516.1_1719806_1720235_-	PRK10546, PRK10546, pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA|270aa|up_7|NZ_CP011516.1_1720231_1721041_-	PRK11756, PRK11756, exonuclease III; Provisional	NA|190aa|up_6|NZ_CP011516.1_1721139_1721709_-	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|283aa|up_5|NZ_CP011516.1_1722633_1723482_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|161aa|up_4|NZ_CP011516.1_1723571_1724054_-	PRK01617, PRK01617, hypothetical protein; Provisional	NA|356aa|up_3|NZ_CP011516.1_1724274_1725342_+	PRK10693, PRK10693, two-component system response regulator RssB	NA|304aa|up_2|NZ_CP011516.1_1725554_1726466_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|136aa|up_1|NZ_CP011516.1_1726741_1727149_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|196aa|up_0|NZ_CP011516.1_1727665_1728253_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|891aa|down_0|NZ_CP011516.1_1728737_1731410_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|215aa|down_1|NZ_CP011516.1_1731915_1732560_+	PRK11111, PRK11111, YchE family NAAT transporter	NA|545aa|down_2|NZ_CP011516.1_1733250_1734885_+	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|307aa|down_3|NZ_CP011516.1_1734952_1735873_+	PRK09471, oppB, oligopeptide ABC transporter permease OppB	NA|303aa|down_4|NZ_CP011516.1_1735884_1736793_+	PRK15406, PRK15406, oligopeptide ABC transporter permease OppC; Provisional	NA|316aa|down_5|NZ_CP011516.1_1736804_1737752_+	PRK09473, oppD, oligopeptide transporter ATP-binding component; Provisional	NA|335aa|down_6|NZ_CP011516.1_1737748_1738753_+	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional	NA|110aa|down_7|NZ_CP011516.1_1738814_1739144_-	PRK05094, PRK05094, dsDNA-mimic protein; Reviewed	NA|487aa|down_8|NZ_CP011516.1_1739198_1740659_-	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|59aa|down_9|NZ_CP011516.1_1740849_1741026_+	NA
GCF_001186215.1_ASM118621v1	NZ_CP011516	Edwardsiella sp. LADL05-105 chromosome, complete genome	4	1844126-1845010	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no		cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	Orphan	GAAACACCCCCACAGGCGTGGGGAAAAC,GAAACACCCCCACAGGCGTGGGGAAAAC,GTTTTCCCCACGCCTGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	14,14,13	14	Orphan	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	NA|156aa|up_9|NZ_CP011516.1_1830978_1831446_-,NA|50aa|up_8|NZ_CP011516.1_1831475_1831625_-,NA|101aa|up_6|NZ_CP011516.1_1835683_1835986_-,NA|929aa|up_5|NZ_CP011516.1_1836637_1839424_+,NA|99aa|up_4|NZ_CP011516.1_1839542_1839839_-,NA|116aa|up_3|NZ_CP011516.1_1841212_1841560_+,NA|172aa|down_1|NZ_CP011516.1_1846301_1846817_+,NA|133aa|down_3|NZ_CP011516.1_1847957_1848356_+	NA|156aa|up_9|NZ_CP011516.1_1830978_1831446_-	NA	NA|50aa|up_8|NZ_CP011516.1_1831475_1831625_-	NA	NA|357aa|up_7|NZ_CP011516.1_1832008_1833079_-	pfam03837, RecT, RecT family	NA|101aa|up_6|NZ_CP011516.1_1835683_1835986_-	NA	NA|929aa|up_5|NZ_CP011516.1_1836637_1839424_+	NA	NA|99aa|up_4|NZ_CP011516.1_1839542_1839839_-	NA	NA|116aa|up_3|NZ_CP011516.1_1841212_1841560_+	NA	NA|215aa|up_2|NZ_CP011516.1_1841669_1842314_+	pfam07105, DUF1367, Protein of unknown function (DUF1367)	NA|107aa|up_1|NZ_CP011516.1_1842316_1842637_+	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|322aa|up_0|NZ_CP011516.1_1842894_1843860_+	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms]	NA|259aa|down_0|NZ_CP011516.1_1845403_1846180_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)	NA|172aa|down_1|NZ_CP011516.1_1846301_1846817_+	NA	NA|273aa|down_2|NZ_CP011516.1_1846905_1847724_+	TIGR02642, hypothetical_protein_YPTB1803, uncharacterized phage protein	NA|133aa|down_3|NZ_CP011516.1_1847957_1848356_+	NA	NA|77aa|down_4|NZ_CP011516.1_1848472_1848703_+	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|110aa|down_5|NZ_CP011516.1_1848677_1849007_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|113aa|down_6|NZ_CP011516.1_1849092_1849431_+	pfam05106, Phage_holin_3_1, Phage holin family (Lysis protein S)	NA|184aa|down_7|NZ_CP011516.1_1849433_1849985_+	COG3926, zliS, Lysozyme family protein [General function prediction only]	NA|261aa|down_8|NZ_CP011516.1_1850165_1850948_+	pfam08346, AntA, AntA/AntB antirepressor	NA|559aa|down_9|NZ_CP011516.1_1852516_1854193_+	PHA02533, 17, large terminase protein; Provisional
GCF_001186215.1_ASM118621v1	NZ_CP011516	Edwardsiella sp. LADL05-105 chromosome, complete genome	5	2145114-2145203	5	CRISPRCasFinder	no		cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	Orphan	GGAAATCCCCCATGGACGTGGGGAAGATC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,DinG	NA,NA|157aa|down_1|NZ_CP011516.1_2147142_2147613_-,NA|144aa|down_6|NZ_CP011516.1_2151498_2151930_-,NA|141aa|down_7|NZ_CP011516.1_2152065_2152488_-	NA|353aa|up_9|NZ_CP011516.1_2132818_2133877_+	PRK09501, potD, spermidine/putrescine ABC transporter periplasmic substrate-binding protein; Reviewed	NA|181aa|up_8|NZ_CP011516.1_2133920_2134463_-	PRK04940, PRK04940, hypothetical protein; Provisional	NA|341aa|up_7|NZ_CP011516.1_2134561_2135584_-	PRK05337, PRK05337, beta-hexosaminidase; Provisional	NA|131aa|up_6|NZ_CP011516.1_2136959_2137352_-	pfam07233, DUF1425, Protein of unknown function (DUF1425)	NA|117aa|up_5|NZ_CP011516.1_2137381_2137732_-	PRK10687, PRK10687, purine nucleoside phosphoramidase; Provisional	NA|185aa|up_4|NZ_CP011516.1_2138908_2139463_-	PRK10455, PRK10455, periplasmic protein; Reviewed	NA|172aa|up_3|NZ_CP011516.1_2139852_2140368_-	PRK10455, PRK10455, periplasmic protein; Reviewed	NA|279aa|up_2|NZ_CP011516.1_2140777_2141614_+	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional	NA|254aa|up_1|NZ_CP011516.1_2141679_2142441_+	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|84aa|up_0|NZ_CP011516.1_2142766_2143018_+	pfam08980, DUF1883, Domain of unknown function (DUF1883)	NA|460aa|down_0|NZ_CP011516.1_2145660_2147040_-	pfam12486, VasL, Type VI secretion system, EvfB, or VasL	NA|157aa|down_1|NZ_CP011516.1_2147142_2147613_-	NA	NA|152aa|down_2|NZ_CP011516.1_2147627_2148083_-	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein	NA|182aa|down_3|NZ_CP011516.1_2148082_2148628_-	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	NA|362aa|down_4|NZ_CP011516.1_2148605_2149691_-	pfam06996, T6SS_TssG, Type VI secretion, TssG	NA|585aa|down_5|NZ_CP011516.1_2149654_2151409_-	pfam05947, T6SS_TssF, Type VI secretion system, TssF	NA|144aa|down_6|NZ_CP011516.1_2151498_2151930_-	NA	NA|141aa|down_7|NZ_CP011516.1_2152065_2152488_-	NA	NA|421aa|down_8|NZ_CP011516.1_2152487_2153750_-	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension	NA|534aa|down_9|NZ_CP011516.1_2153781_2155383_-	pfam16989, T6SS_VasJ, Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ
