The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	934972	942284	4678365	protease,integrase	Dickeya_phage(16.67%)	7	923711:923725	942502:942516
923711:923725	attL	AGCCTGCGAGGAGAC	NA	NA	NA	NA
WP_001201751.1|934972_936091_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125875.1|936087_938034_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_000447499.1|938163_938385_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|938707_939028_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934059.1|939058_941335_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	1.4e-164
WP_001117984.1|941547_941745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001539594.1|941906_942284_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
942502:942516	attR	GTCTCCTCGCAGGCT	NA	NA	NA	NA
>prophage 2
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	992742	1054251	4678365	protease,tRNA,tail	Salmonella_phage(23.53%)	54	NA	NA
WP_001154025.1|992742_993546_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|993538_994861_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060025.1|994841_995546_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572746.1|995545_1000012_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925870.1|1000356_1002207_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|1002466_1003015_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|1003042_1003690_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|1003751_1004942_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|1005125_1006217_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117867.1|1006809_1008210_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000762342.1|1008410_1008872_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544855.1|1009189_1010404_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893200.1|1010648_1012085_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191404.1|1012162_1013365_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001676370.1|1013559_1013970_-	enterohemolysin	NA	H6WRX0	Salmonella_phage	100.0	5.0e-33
WP_000274547.1|1013990_1014620_+	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	65.9	1.6e-75
WP_001707713.1|1014603_1015182_+	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	73.4	1.7e-74
WP_000583382.1|1015225_1016935_+|tail	tail fiber protein	tail	A0A0U2SAV1	Escherichia_phage	66.0	1.5e-91
WP_000143167.1|1016934_1017516_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_072100753.1|1017519_1017768_-|tail	phage tail protein	tail	A0A1B0VCD0	Salmonella_phage	66.2	2.1e-18
WP_001674638.1|1017993_1018962_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.4	3.0e-193
WP_000334547.1|1019609_1020236_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_001525490.1|1020593_1021280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497441.1|1021550_1021742_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_000193790.1|1022167_1024780_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	6.3e-20
WP_000291723.1|1024987_1025998_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001574119.1|1026163_1026706_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224079.1|1026702_1027812_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086485.1|1027910_1030019_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|1030031_1031939_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333139.1|1031953_1033207_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433414.1|1033211_1034852_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|1034848_1035412_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1035667_1035835_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1035934_1036453_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156448.1|1036521_1038282_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1038467_1038920_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001674965.1|1038991_1040044_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288733.1|1040398_1040908_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1041124_1041730_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950876.1|1041716_1043870_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1043888_1044335_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420505.1|1044458_1046513_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
WP_000424187.1|1046548_1047007_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847719.1|1047101_1047764_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001676378.1|1047937_1048351_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1048395_1048713_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140478.1|1048770_1049982_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859416.1|1050196_1050745_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548080.1|1050770_1051550_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000072884.1|1051598_1051880_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904449.1|1051876_1052206_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|1052292_1052952_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000938186.1|1053570_1054251_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	2.2e-81
>prophage 3
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	1194440	1252490	4678365	integrase,tail,tRNA,holin,lysis	Salmonella_phage(22.22%)	59	1237038:1237055	1249183:1249200
WP_000569035.1|1194440_1195412_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_000019607.1|1195408_1196152_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	4.1e-25
WP_000252975.1|1196192_1196588_-	membrane protein	NA	NA	NA	NA	NA
WP_000639226.1|1196640_1197459_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	80.3	4.5e-57
WP_000916144.1|1197455_1198022_-	hydrolase	NA	NA	NA	NA	NA
WP_001258629.1|1198346_1200119_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000653693.1|1200221_1200674_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_000907242.1|1200703_1201444_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000022509.1|1201480_1202002_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
WP_000716756.1|1202003_1202603_-	YebB family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001676480.1|1202810_1203503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000580335.1|1203862_1204474_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000568508.1|1204482_1205493_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	26.4	2.4e-07
WP_000571521.1|1205571_1206357_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_000203023.1|1206353_1207109_-	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	8.5e-18
WP_000939597.1|1207187_1208132_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
WP_001184028.1|1208147_1209467_+	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
WP_000448401.1|1209583_1210555_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
WP_000091156.1|1210627_1212070_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_001056720.1|1212193_1213063_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000301711.1|1213403_1214879_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
WP_001069113.1|1215113_1216925_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_000800494.1|1216962_1217604_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_000173418.1|1217703_1218882_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_000257723.1|1219012_1219303_+	DNA damage-inducible protein YebG	NA	NA	NA	NA	NA
WP_001042123.1|1219370_1219724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000024715.1|1219817_1220477_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_000936990.1|1220689_1222741_+	oligopeptidase B	NA	NA	NA	NA	NA
WP_000944288.1|1222777_1223476_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
WP_050900972.1|1223499_1224156_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_000856224.1|1224263_1224494_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
WP_000168393.1|1224631_1225006_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_000979694.1|1225006_1225882_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_000722370.1|1225898_1226252_+	YebY family protein	NA	NA	NA	NA	NA
WP_000087636.1|1226634_1227714_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	3.0e-101
WP_001575998.1|1227688_1227967_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
WP_001237395.1|1228380_1230360_+	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
WP_000972675.1|1230991_1231297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000940753.1|1231360_1231960_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	4.7e-96
WP_000784710.1|1231956_1232184_+	DNA breaking-rejoining protein	NA	A0A0M4RU10	Salmonella_phage	66.7	2.2e-14
WP_001097218.1|1232313_1233003_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.9	2.1e-60
WP_001574213.1|1233099_1233624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798708.1|1233997_1234447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001574215.1|1234807_1235494_-	PipA/GogA/GtgA family type III secretion system effector	NA	Q9MBM0	Phage_Gifsy-2	99.6	1.8e-131
WP_001574216.1|1235769_1236099_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984586.1|1236082_1236535_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
WP_001541990.1|1236552_1237032_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
1237038:1237055	attL	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000877926.1|1237926_1238460_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152416.1|1238549_1239245_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
WP_000161704.1|1243298_1244021_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA	NA
WP_001536069.1|1244500_1245301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144415106.1|1246245_1247100_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	50.9	1.4e-72
WP_077681935.1|1247159_1247654_-	RecE	NA	A0A0U2I1R6	Escherichia_phage	70.3	3.7e-22
WP_001013467.1|1247844_1248075_+	hypothetical protein	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
WP_001050883.1|1248128_1248662_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	43.0	5.4e-11
WP_000789530.1|1248918_1249086_-	lytic enzyme	NA	NA	NA	NA	NA
WP_001576014.1|1249150_1249339_-	hypothetical protein	NA	NA	NA	NA	NA
1249183:1249200	attR	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000348542.1|1249393_1249885_+	DUF1441 family protein	NA	Q9EYD0	Enterobacteria_phage	56.2	1.6e-41
WP_001687735.1|1251989_1252490_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	77.4	1.5e-63
>prophage 4
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	1466707	1482648	4678365	tRNA,holin	Escherichia_phage(62.5%)	21	NA	NA
WP_000123686.1|1466707_1468081_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	2.1e-51
WP_001156217.1|1468124_1469060_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	7.2e-144
WP_001676915.1|1469376_1469994_-	exodeoxyribonuclease	NA	A0A088CD28	Shigella_phage	41.9	2.5e-36
WP_000800272.1|1470021_1470339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000560208.1|1470423_1470645_-	cell division protein FtsZ	NA	A0A0U2RTC4	Escherichia_phage	83.6	7.9e-33
WP_000004762.1|1471082_1471604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085981757.1|1471711_1471867_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	48.9	2.6e-06
WP_001227859.1|1472251_1472719_-	helix-turn-helix domain-containing protein	NA	A0A0U2QW76	Escherichia_phage	66.9	1.0e-53
WP_001676916.1|1472990_1473320_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	51.7	6.5e-23
WP_001033796.1|1473481_1474036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000556389.1|1474032_1474965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000882662.1|1475334_1475547_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	95.7	2.5e-28
WP_000940751.1|1476070_1476670_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	5.5e-97
WP_000774470.1|1476669_1476960_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	76.0	5.1e-40
WP_000640113.1|1476956_1477493_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	70.9	1.4e-70
WP_000900605.1|1479661_1480057_+	tellurite resistance TerB family protein	NA	Q71TK7	Escherichia_phage	88.9	4.7e-44
WP_001688615.1|1479978_1480167_+	hypothetical protein	NA	Q8W636	Enterobacteria_phage	57.4	9.4e-11
WP_000445513.1|1480156_1480438_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	49.4	1.3e-16
WP_000802786.1|1480434_1480980_+	glycoside hydrolase family 108 protein	NA	A0A0U2S643	Escherichia_phage	83.4	2.3e-89
WP_000159240.1|1481825_1482164_+	EamA family transporter	NA	NA	NA	NA	NA
WP_001082296.1|1482213_1482648_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
>prophage 5
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	2134440	2144947	4678365		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2134440_2135754_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565913.1|2135780_2136860_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648783.1|2136864_2137638_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018223.1|2137653_2138628_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973709.1|2138633_2139185_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
WP_000857535.1|2139185_2140064_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023658.1|2140111_2141011_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000697848.1|2141010_2142096_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_000981469.1|2142472_2143366_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001144948.1|2143543_2144947_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
>prophage 6
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	2212140	2221311	4678365	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195340.1|2212140_2214174_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
WP_000703145.1|2214414_2214873_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	6.4e-53
WP_001197951.1|2215044_2215575_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950414.1|2215631_2216099_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	89.7	4.3e-73
WP_000598637.1|2216145_2216865_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272845.1|2216861_2218547_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
WP_001240421.1|2218769_2219501_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.4	1.7e-100
WP_001261696.1|2219560_2219668_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2219648_2220380_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569168.1|2220363_2221311_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
>prophage 7
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	2457739	2463797	4678365		Salmonella_virus(50.0%)	6	NA	NA
WP_000377779.1|2457739_2458681_+	membrane protein	NA	E7DYY8	Enterobacteria_phage	87.8	1.6e-146
WP_001576268.1|2459922_2460312_+	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	85.6	1.1e-50
WP_001724485.1|2460280_2460550_+	glycosyltransferase	NA	A8CG95	Salmonella_phage	79.5	3.3e-25
WP_000400616.1|2460551_2462474_+	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	77.3	5.6e-300
WP_105789228.1|2463463_2463607_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	82.9	1.7e-12
WP_108630384.1|2463545_2463797_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	68.6	7.6e-08
>prophage 8
NZ_CP011790	Salmonella enterica subsp. enterica serovar Enteritidis strain SEE1 chromosome, complete genome	4678365	2693166	2793100	4678365	integrase,portal,tail,plate,transposase,tRNA,capsid,lysis,head,terminase	Salmonella_phage(75.0%)	88	2711534:2711548	2792005:2792019
WP_000083345.1|2693166_2693904_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2694033_2695368_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001675040.1|2695385_2696285_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188410.1|2696387_2696975_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2697036_2697420_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|2697737_2698427_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997368.1|2698542_2699580_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098733.1|2699783_2700203_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	39.0	5.9e-13
WP_000183642.1|2700275_2700956_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082648.1|2701009_2703670_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2703784_2705140_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264473.1|2705184_2705508_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807815.1|2705504_2706806_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.6	1.8e-44
WP_000985655.1|2706909_2707365_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	3.9e-34
2711534:2711548	attL	TTTGAGTTCCCGGCC	NA	NA	NA	NA
WP_001235093.1|2713139_2715713_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.0e-127
WP_000992636.1|2715842_2716574_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2716570_2717551_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2717682_2718420_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2718690_2719029_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2719132_2719180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200077.1|2719279_2720440_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210984.1|2720400_2721309_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225188.1|2721366_2722488_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2722497_2723568_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2724007_2724526_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030985.1|2724518_2725739_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2725895_2726243_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469804.1|2726283_2727051_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2727095_2727644_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2727662_2727911_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2728163_2729525_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2729690_2730482_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2730501_2731788_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001287926.1|2731908_2732514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2732547_2733138_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059151.1|2733261_2734140_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880965.1|2734225_2735887_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2736035_2736374_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2736539_2736830_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2736819_2737296_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2737444_2737927_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237694.1|2738541_2750016_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_050900993.1|2750080_2751490_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196151.1|2751486_2753667_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_012543392.1|2753674_2754838_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980500.1|2755389_2755608_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	100.0	2.1e-38
WP_001102269.1|2755676_2756777_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	100.0	2.6e-201
WP_000763316.1|2760052_2760172_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280963.1|2760186_2760489_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	100.0	1.5e-45
WP_001207651.1|2760543_2761059_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	100.0	9.3e-93
WP_000046107.1|2761068_2762241_-|tail	phage tail sheath protein	tail	E5G6P7	Salmonella_phage	99.7	5.7e-223
WP_000974843.1|2762343_2762568_-	helix-turn-helix domain-containing protein	NA	E5G6P5	Salmonella_phage	100.0	1.5e-34
WP_000143187.1|2763437_2764013_-|tail	tail fiber assembly protein	tail	E5G6P1	Salmonella_phage	100.0	4.3e-107
WP_051123691.1|2764012_2765866_-|tail	phage tail protein	tail	E5G6P0	Salmonella_phage	99.8	0.0e+00
WP_001086804.1|2765862_2766468_-|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	100.0	1.3e-117
WP_000268332.1|2766460_2767369_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	100.0	5.4e-160
WP_000189373.1|2767355_2767715_-|plate	baseplate assembly protein	plate	E5G6N7	Salmonella_phage	100.0	1.1e-60
WP_001672413.1|2767711_2768290_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	100.0	1.4e-108
WP_001687856.1|2768471_2769218_+	hypothetical protein	NA	E5G6N5	Salmonella_phage	100.0	2.4e-142
WP_000343949.1|2769219_2769666_-	phage virion morphogenesis protein	NA	E5G6N4	Salmonella_phage	99.3	2.3e-71
WP_001039958.1|2769658_2770090_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	100.0	1.7e-76
WP_000196199.1|2770185_2770614_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	100.0	2.3e-68
WP_001069923.1|2770610_2771126_-	lysozyme	NA	E5G6N1	Salmonella_phage	100.0	5.3e-96
WP_000171565.1|2771106_2771322_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868184.1|2771325_2771529_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000673537.1|2771528_2771993_-|head	head completion/stabilization protein	head	E5G6M8	Salmonella_phage	100.0	9.9e-86
WP_000059173.1|2772086_2772737_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	100.0	4.9e-115
WP_000730760.1|2772740_2773802_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	99.7	6.0e-195
WP_000216276.1|2773818_2774652_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	100.0	3.1e-130
WP_000928182.1|2774841_2776560_+|terminase	terminase ATPase subunit family protein	terminase	E5G6M4	Salmonella_phage	100.0	0.0e+00
WP_050900994.1|2776559_2777600_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	99.7	3.6e-200
WP_001284991.1|2777703_2779368_-	AIPR family protein	NA	E5G6M2	Salmonella_phage	100.0	0.0e+00
WP_001673609.1|2779681_2780359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001217571.1|2780472_2780706_-	DinI family protein	NA	E5G6M1	Salmonella_phage	98.7	1.8e-35
WP_001154433.1|2780716_2780905_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	100.0	1.4e-27
WP_000104187.1|2783467_2784325_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	100.0	6.8e-165
WP_000752613.1|2784321_2784549_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
WP_001244219.1|2784548_2784782_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	100.0	1.7e-33
WP_000963474.1|2784849_2785191_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	100.0	1.2e-56
WP_000956190.1|2785154_2785355_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	100.0	2.4e-33
WP_000460848.1|2785362_2785872_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	100.0	1.5e-87
WP_000102105.1|2785905_2786148_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	97.5	6.8e-38
WP_000932273.1|2786269_2786902_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	51.4	6.3e-59
WP_000218402.1|2786904_2787921_+|integrase	site-specific integrase	integrase	E5G6L0	Salmonella_phage	100.0	5.0e-199
WP_000360326.1|2788473_2789136_+	hypothetical protein	NA	E5G6K9	Salmonella_phage	100.0	3.4e-124
WP_001142974.1|2789397_2789991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000445376.1|2790389_2791193_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	44.7	1.2e-62
WP_089113803.1|2791988_2793100_-|transposase	IS3-like element IS1351 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	7.6e-07
2792005:2792019	attR	TTTGAGTTCCCGGCC	NA	NA	NA	NA
