The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011310	Erythrobacter atlanticus strain s21-N3 chromosome, complete genome	3012400	83835	160844	3012400	transposase,integrase	Burkholderia_phage(11.11%)	51	84948:85007	160526:161470
WP_048884335.1|83835_84888_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
84948:85007	attL	AGTTTTGACGCCCGCCGCGCAGCGGGAAGCTGTTGCTCATCTCCAGGCGTGCCATGGGAT	NA	NA	NA	NA
WP_048884336.1|87723_90957_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_063612318.1|90953_92234_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_048884337.1|92230_94273_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_048884339.1|94494_100464_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	21.5	2.4e-38
WP_048884340.1|100453_103750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048884341.1|103858_107590_-	DEAD/DEAH box helicase family protein	NA	A0A160DHD3	Gordonia_phage	26.8	1.1e-33
WP_082863657.1|107583_108960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048884342.1|108986_109715_-	OmpA family protein	NA	NA	NA	NA	NA
WP_048884343.1|109714_111640_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_048884345.1|112115_112751_+	S24 family peptidase	NA	I3UM39	Rhodobacter_phage	43.9	1.3e-19
WP_048886575.1|112762_113671_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_048884346.1|113743_116668_-	conjugative relaxase	NA	NA	NA	NA	NA
WP_048884347.1|116726_119042_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_048884348.1|119031_119364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048886576.1|120094_120316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048886577.1|120662_120929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048884349.1|120995_121382_-	single-stranded DNA-binding protein	NA	A0A0K1LLJ2	Bacillus_phage	30.5	8.7e-11
WP_048886578.1|121663_121933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048884350.1|122200_123124_-	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_048884351.1|123417_123843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048884352.1|123854_124790_-	DUF1738 domain-containing protein	NA	A0A1V0EBY3	Caulobacter_phage	45.1	5.0e-60
WP_048884354.1|125025_125781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082863859.1|125786_126626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048884356.1|127186_128299_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_048884357.1|128295_130923_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_082863658.1|131018_132605_-	AAA family ATPase	NA	E5E3R2	Burkholderia_phage	29.4	6.5e-28
WP_048884358.1|132548_133040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149036390.1|133871_134429_-	AAA family ATPase	NA	E5E3R2	Burkholderia_phage	35.0	4.5e-16
WP_063612469.1|134460_134742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048886581.1|134906_136877_-	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	28.6	1.7e-30
WP_048884362.1|136981_138820_-	strawberry notch C-terminal domain-containing protein	NA	A0A076FMQ0	Aureococcus_anophage	30.3	1.9e-15
WP_038575219.1|138876_140421_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K2CP59	Brevibacillus_phage	29.1	9.2e-11
WP_006832488.1|140417_141332_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_048884363.1|141328_142333_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2L1IV36	Escherichia_phage	34.6	1.6e-11
WP_048884364.1|142468_144952_-	strawberry notch family protein	NA	A0A076FMQ0	Aureococcus_anophage	24.1	7.6e-23
WP_082863661.1|145030_145846_-	toprim domain-containing protein	NA	A0A0H5AWB1	Pseudomonas_phage	35.3	8.5e-16
WP_048886582.1|146082_146667_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	55.9	4.2e-25
WP_174539172.1|146811_147282_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_048884366.1|147272_147467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048884367.1|147605_148829_-|integrase	tyrosine-type recombinase/integrase	integrase	B7SYF8	Stenotrophomonas_phage	44.9	8.4e-92
WP_048884368.1|149337_150285_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_048884369.1|150416_151070_+	fructose-6-phosphate aldolase	NA	I3ULK3	Synechococcus_phage	50.7	6.6e-51
WP_048886584.1|151349_152939_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.3	1.4e-25
WP_048884370.1|153186_153648_-	DUF4168 domain-containing protein	NA	NA	NA	NA	NA
WP_048884371.1|154206_155082_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_161485414.1|155492_156017_+	TonB family protein	NA	NA	NA	NA	NA
WP_048884374.1|156429_157440_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_174539173.1|157492_158758_-	aspartate kinase	NA	NA	NA	NA	NA
WP_048884376.1|158826_159576_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_149036385.1|159672_160844_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.0	5.1e-46
160526:161470	attR	ATCCCATGGCACGCCTGGAGATGAGCAACAGCTTCCCGCTGCGCGGCGGGCGTCAAAACTTTTTTGCCAGAAGATCCTTCAACGCCGCCTTGTCCAGCATCGCATCGGCCAGCAAACGCTTCAGCTTCGCGTTCTCGCTCTCCAGCTCCTTCAGCCGCCGGGCATCGGACACTTCCATCCCGCCATACTTCGACTTCCAGTTGTAGATCGTCGCTTCAGATACACCGTGCCGACGGGCAAGGTCAGCGGTCTTGGCTCCCGCCTCCGCTTCCTTCAGCACGCCAATGATCTGCTCTTCTGAAAACCTCGTTCTCTTCATCTCGTCCGTCCTTCTGTCAGGGCCGGACTCTAATCCAACTTGGAGGAAAATCAGGGGGTCACGTCAATGATACAGAAGACTTAATCAGAGGATCGTGTTCTCCCATTCGCTGGCGTTAAAGCCAACCACAATGCGATCCCCATCCTGCGTCTCTGCCACGGGTCGCTTGATCATGCTGGGGTATTCCACCATCAGCGCCAGCGCCCTGTCACGGGTAATGTCGGCCTTCTGCGCGTCGTCCAGTTTACGGAAAGTCGTGCCGCGCCGGTTGAGCAGAACTTCCCACCCGCAGCGATCCGCCCAACGCGCCAGATTGTCTGCGTCAACGCCTTCCTTCTTGTAGTCGTGAAAAATGTATTCCACGCCCTGCGCATCCAGCCACTTGCGTGCCTTTTTGACGGTATCGCAGTTTGGAATGCCGTATATTTCGATGTTGGCCATTAAATTGTTTGTCTCTTCGATTTTGATGCGTTTCGTGTTCAGCTCGGTATCGCATAAAACTATGGTCGCAGAACTATTTCCTCCGCGAAAATCAGGGCTTCGCTAACAACCGACTAACGGAGATCGCGTTAATGGGTCCCAACTGATCCTCTAAATAACTTTGGTCAAAAGCCGAGCCTTTGGCG	NA	NA	NA	NA
>prophage 3
NZ_CP011310	Erythrobacter atlanticus strain s21-N3 chromosome, complete genome	3012400	1001792	1045304	3012400	tRNA,integrase	uncultured_Mediterranean_phage(14.29%)	40	1042210:1042231	1054777:1054798
WP_161485439.1|1001792_1002761_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_053106545.1|1002761_1003523_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_048885032.1|1003621_1006393_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_048885033.1|1006392_1007028_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_048886741.1|1007024_1008050_-	glucokinase	NA	NA	NA	NA	NA
WP_048885034.1|1008064_1009894_-	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_048886742.1|1009886_1011317_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	38.0	1.9e-79
WP_048885035.1|1011419_1012220_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_048885036.1|1012270_1012687_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_048885037.1|1012785_1013499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174539179.1|1013495_1014005_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_048886744.1|1014165_1015344_+	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_048885038.1|1015455_1016436_+	PRC-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_048885039.1|1016525_1017920_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_048885040.1|1017996_1018413_+	DUF1761 domain-containing protein	NA	NA	NA	NA	NA
WP_082863723.1|1018432_1019521_-	potassium channel family protein	NA	NA	NA	NA	NA
WP_048885042.1|1019520_1020276_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	40.5	7.6e-43
WP_048885043.1|1020279_1021557_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.5	5.3e-97
WP_048886745.1|1021764_1022961_+	sulfotransferase	NA	NA	NA	NA	NA
WP_048886746.1|1023195_1024365_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_048886747.1|1024567_1025137_-	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	52.6	1.2e-27
WP_149036522.1|1025361_1026177_+	toprim domain-containing protein	NA	A0A0H5AWB1	Pseudomonas_phage	34.1	8.0e-14
WP_048885045.1|1026252_1028724_+	strawberry notch family protein	NA	A0A1X9HW54	Ruegeria_phage	28.1	4.3e-10
WP_038575219.1|1028869_1030414_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K2CP59	Brevibacillus_phage	29.1	9.2e-11
WP_006832488.1|1030410_1031325_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_048884363.1|1031321_1032326_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2L1IV36	Escherichia_phage	34.6	1.6e-11
WP_048885046.1|1032372_1034211_+	strawberry notch C-terminal domain-containing protein	NA	A0A076FMQ0	Aureococcus_anophage	30.9	1.9e-15
WP_048885047.1|1034315_1036310_+	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	28.2	4.6e-31
WP_048885048.1|1036477_1037407_+	DUF1738 domain-containing protein	NA	K4JTS1	Caulobacter_virus	46.3	1.8e-57
WP_048885049.1|1037421_1037838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048886748.1|1037889_1038267_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_048885050.1|1038238_1038967_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_048885051.1|1039239_1040178_+	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_149036420.1|1040236_1040410_-	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
WP_048885052.1|1040551_1040821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048885053.1|1041143_1041554_+	single-stranded DNA-binding protein	NA	E8ZD59	Streptococcus_phage	32.5	3.0e-09
WP_048885054.1|1041620_1041887_-	hypothetical protein	NA	NA	NA	NA	NA
1042210:1042231	attL	ATCAGGAGGATATCATGGCTAC	NA	NA	NA	NA
WP_048885055.1|1042223_1042445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048885056.1|1043151_1044144_+|integrase	site-specific integrase	integrase	A0A221SAN4	Ralstonia_phage	33.4	5.1e-39
WP_048885057.1|1044140_1045304_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A221SAN4	Ralstonia_phage	34.9	2.9e-41
1054777:1054798	attR	ATCAGGAGGATATCATGGCTAC	NA	NA	NA	NA
>prophage 1
NZ_CP015441	Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence	213959	0	48609	213959	transposase,integrase	Ralstonia_phage(33.33%)	42	13777:13792	52591:52606
WP_169807774.1|120_264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048884363.1|260_1265_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2L1IV36	Escherichia_phage	34.6	1.6e-11
WP_149036585.1|1400_3743_-	strawberry notch family protein	NA	A0A076FMQ0	Aureococcus_anophage	22.7	7.4e-20
WP_063612713.1|3914_4754_-	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_063612551.1|5247_6546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063612552.1|7067_8276_+	AAA family ATPase	NA	A0A2I6B2X3	Macacine_betaherpesvirus	31.9	6.2e-39
WP_063612553.1|8456_9440_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_082834645.1|9436_10456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082834644.1|10570_11743_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_082347915.1|12510_13914_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
13777:13792	attL	GCCGAAACCGGCGCCG	NA	NA	NA	NA
WP_063612555.1|13923_15012_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_063612556.1|15015_18156_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_053833465.1|18159_19647_+	TolC family protein	NA	NA	NA	NA	NA
WP_158246558.1|19633_20866_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_174539185.1|20874_21288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063612558.1|21317_22799_+	phospholipase D family protein	NA	NA	NA	NA	NA
WP_063612715.1|22820_24335_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_053833462.1|24776_25439_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174539186.1|25657_25858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082347913.1|25856_26402_+	hypothetical protein	NA	W8CYF6	Bacillus_phage	28.8	7.0e-06
WP_087910621.1|26473_26932_+	two pore domain potassium channel family protein	NA	NA	NA	NA	NA
WP_161485477.1|27354_27801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046903470.1|27797_28067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063612561.1|28196_28667_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046903468.1|28663_29089_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_082863931.1|30416_31673_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A221SAN4	Ralstonia_phage	35.8	6.1e-45
WP_063612563.1|31669_32911_+|integrase	site-specific integrase	integrase	A0A221SAN4	Ralstonia_phage	30.0	9.6e-35
WP_063612717.1|32921_33302_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_063612564.1|33288_33618_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_149036562.1|33823_34915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149036563.1|35086_35884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149036385.1|36071_37243_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.0	5.1e-46
WP_063612567.1|37293_38607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063612568.1|38608_38983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063612569.1|38979_40965_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_063612570.1|40961_41171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149036564.1|41163_43326_-	DEAD/DEAH box helicase family protein	NA	A0A1I9SEY1	Klebsiella_phage	22.6	1.6e-08
WP_063612719.1|43309_44224_-	site-specific DNA-methyltransferase	NA	A0A088FB29	Idiomarinaceae_phage	27.7	9.0e-14
WP_063612571.1|44821_45220_+	single-stranded DNA-binding protein	NA	A0A1D6Z259	Staphylococcus_phage	34.7	9.0e-11
WP_063612572.1|45530_45752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063612720.1|46243_47416_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A221SAN4	Ralstonia_phage	30.5	9.7e-37
WP_063612573.1|47412_48609_+|integrase	site-specific integrase	integrase	A0A221SAN4	Ralstonia_phage	30.4	2.1e-34
52591:52606	attR	CGGCGCCGGTTTCGGC	NA	NA	NA	NA
