The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012044	Mycobacteroides abscessus UC22 chromosome, complete genome	5257136	511523	575456	5257136	capsid,transposase,terminase,integrase,portal	Mycobacterium_phage(30.0%)	75	501130:501146	574274:574290
501130:501146	attL	CAGTGTGCATGCCGCCG	NA	NA	NA	NA
WP_085984359.1|511523_512785_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	53.1	4.6e-69
WP_049231790.1|513102_513504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049231791.1|513500_515732_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_079454457.1|515718_516912_-|integrase	tyrosine-type recombinase/integrase	integrase	F8J1D8	Lactobacillus_phage	27.1	3.4e-05
WP_049231793.1|516943_518194_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_079454399.1|518255_518966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049231794.1|519304_520081_+	membrane protein	NA	NA	NA	NA	NA
WP_005083513.1|520077_520662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005083512.1|520716_520908_+	DUF4244 domain-containing protein	NA	NA	NA	NA	NA
WP_005065483.1|520961_521234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074376839.1|521187_521577_+	flp pilus-assembly TadE/G-like family protein	NA	NA	NA	NA	NA
WP_005083508.1|521589_522222_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005083507.1|522427_522889_+	membrane protein	NA	NA	NA	NA	NA
WP_049231795.1|522885_525816_+	RND family transporter	NA	NA	NA	NA	NA
WP_025239156.1|525935_526376_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005083502.1|526443_527538_+	NmrA family NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_005083500.1|527550_527919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005086905.1|527915_528836_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_005083497.1|528877_529513_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005083496.1|529662_530622_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_049231796.1|530713_531817_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
WP_005098672.1|531813_534147_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	24.3	1.4e-07
WP_005064941.1|534464_534668_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	54.7	5.8e-14
WP_049234526.1|534824_535412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231797.1|535598_538391_+	type I DNA topoisomerase	NA	M1PXL0	Moumouvirus	31.2	1.8e-97
WP_005064937.1|538387_539878_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	32.3	5.7e-18
WP_005083491.1|540040_541246_+	DNA polymerase III subunit delta'	NA	S5WKH4	Pseudomonas_phage	29.7	6.3e-07
WP_049231798.1|541813_542047_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_032668405.1|542232_542529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049234528.1|542585_542834_+	hypothetical protein	NA	A0A0A7RXV8	Mycobacterium_phage	56.1	5.8e-16
WP_100459850.1|542830_543139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231800.1|543138_543357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231802.1|543572_543956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231803.1|543952_545101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231804.1|545100_545430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231805.1|545426_546128_+	DUF2637 domain-containing protein	NA	A0A222ZPB3	Mycobacterium_phage	42.8	4.1e-35
WP_049231806.1|546124_546547_+	hypothetical protein	NA	A0A1J0ME36	Mycobacterium_phage	35.4	1.5e-11
WP_005121943.1|546607_546826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231807.1|546826_547681_+	hypothetical protein	NA	A0A076GDW6	Mycobacterium_phage	46.9	5.4e-05
WP_157884446.1|547677_547914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231808.1|547913_548789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231809.1|548785_549319_+	hypothetical protein	NA	A0A2P1N2R2	Gordonia_phage	69.4	1.6e-15
WP_049231811.1|549318_549696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231812.1|549692_549965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231814.1|550128_550539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016887063.1|550707_551022_+	HNH endonuclease	NA	A0A222ZN30	Mycobacterium_phage	55.4	1.0e-25
WP_005121962.1|551026_551296_+	hypothetical protein	NA	A0A142K954	Gordonia_phage	35.7	6.7e-10
WP_049231818.1|551520_551949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025982005.1|551999_552344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231819.1|552315_553770_+|terminase	terminase	terminase	A0A142KAW2	Gordonia_phage	65.5	2.0e-172
WP_049231821.1|553766_555239_+|portal	phage portal protein	portal	A0A2H4J2P6	uncultured_Caudovirales_phage	65.6	5.2e-173
WP_049231822.1|555219_556092_+	hypothetical protein	NA	A0A088FUW7	Mycobacterium_phage	59.6	1.0e-83
WP_079454402.1|556151_556793_+	hypothetical protein	NA	A0A2H4IYC3	uncultured_Caudovirales_phage	45.3	3.6e-17
WP_049231823.1|556812_557721_+|capsid	phage capsid protein	capsid	A0A142KAW6	Gordonia_phage	77.4	6.2e-132
WP_049231826.1|557720_558059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016887071.1|558030_558528_+	hypothetical protein	NA	A0A142KAW8	Gordonia_phage	53.1	5.9e-36
WP_049231828.1|558520_558865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005129597.1|558866_559145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231830.1|559134_559560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231832.1|559649_560510_+	hypothetical protein	NA	A0A159B6N7	Tsukamurella_phage	44.8	7.3e-58
WP_049234532.1|560645_561095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016887077.1|561181_561475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231834.1|561482_564626_+	hypothetical protein	NA	A0A159B6P7	Tsukamurella_phage	61.2	2.0e-65
WP_049231835.1|564622_565720_+	hypothetical protein	NA	A0A161BYL5	Tsukamurella_phage	63.1	5.3e-138
WP_049234534.1|565719_567477_+	hypothetical protein	NA	A0A159B6N9	Tsukamurella_phage	74.2	1.8e-260
WP_049231837.1|567547_567772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231839.1|567768_568158_+	hypothetical protein	NA	A0A0F6WF85	Mycobacterium_phage	32.8	2.2e-06
WP_049231841.1|568154_569207_+	hypothetical protein	NA	A0A159B6N6	Tsukamurella_phage	53.3	1.8e-103
WP_049231843.1|569206_569488_+	hypothetical protein	NA	A0A159B6P6	Tsukamurella_phage	59.3	1.8e-21
WP_049231844.1|569471_571997_+	hypothetical protein	NA	A0A2P1A0Q0	Gordonia_phage	34.0	2.0e-47
WP_049231847.1|572024_572336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231849.1|572336_573491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231850.1|573506_573899_+	hypothetical protein	NA	A0A222ZQF4	Mycobacterium_phage	68.8	2.4e-40
WP_049231852.1|574038_574218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049231853.1|574214_575456_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q854L4	Mycobacterium_phage	62.2	8.6e-84
574274:574290	attR	CGGCGGCATGCACACTG	NA	NA	NA	NA
>prophage 2
NZ_CP012044	Mycobacteroides abscessus UC22 chromosome, complete genome	5257136	2928494	2937032	5257136		Streptococcus_phage(16.67%)	7	NA	NA
WP_005068898.1|2928494_2929166_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
WP_005057567.1|2929279_2930203_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
WP_019164608.1|2930204_2931074_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	47.0	5.3e-56
WP_005068903.1|2931175_2933542_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
WP_005082386.1|2933572_2934106_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	8.1e-15
WP_016892305.1|2934102_2935779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005068908.1|2935778_2937032_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 3
NZ_CP012044	Mycobacteroides abscessus UC22 chromosome, complete genome	5257136	4239865	4251580	5257136		Mycobacterium_phage(69.23%)	20	NA	NA
WP_005080329.1|4239865_4240696_-	NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.1	7.4e-07
WP_005061618.1|4240823_4241114_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005070857.1|4241234_4241426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049233916.1|4241422_4242187_+	antirepressor	NA	A0A142K8T5	Gordonia_phage	48.1	2.5e-49
WP_049233919.1|4242290_4242677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005123075.1|4242673_4243003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005123079.1|4242999_4243380_+	DUF3850 domain-containing protein	NA	A0A1B1SGE4	Mycobacterium_phage	40.9	9.2e-13
WP_049233921.1|4243376_4243727_+	hypothetical protein	NA	J7KDJ6	Mycobacterium_virus	60.2	8.4e-29
WP_049233924.1|4243723_4244023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049233925.1|4244010_4244235_+	hypothetical protein	NA	A0A2H4GST7	Mycobacterium_phage	56.1	1.7e-06
WP_049233928.1|4244231_4245134_+	recE	NA	A0A2D1G8R5	Mycobacterium_phage	51.2	3.9e-78
WP_049233929.1|4245130_4246252_+	hypothetical protein	NA	A0A2P1CGD3	Mycobacterium_phage	69.1	7.2e-98
WP_005123095.1|4246254_4246596_+	hypothetical protein	NA	G8I4S2	Mycobacterium_phage	68.1	1.5e-35
WP_049233932.1|4246623_4247460_+	DUF2303 family protein	NA	G8I4S3	Mycobacterium_phage	66.5	1.1e-103
WP_025988934.1|4247471_4248335_+	SPFH domain-containing protein	NA	A0A0M4RAA7	Mycobacterium_phage	52.9	1.8e-72
WP_005061654.1|4248345_4248879_+	hypothetical protein	NA	A0A0F6WF12	Mycobacterium_phage	53.3	2.3e-41
WP_049233938.1|4248875_4249292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049233940.1|4249456_4250035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049233942.1|4250219_4250618_+	hypothetical protein	NA	G8I4T1	Mycobacterium_phage	80.2	1.0e-51
WP_049233944.1|4250668_4251580_+	hypothetical protein	NA	A0A1B3B1T0	Gordonia_phage	63.3	4.6e-42
>prophage 4
NZ_CP012044	Mycobacteroides abscessus UC22 chromosome, complete genome	5257136	4258582	4286261	5257136	terminase	Mycobacterium_phage(91.3%)	29	NA	NA
WP_049233963.1|4258582_4259533_-	HNH endonuclease	NA	A0A125RNK0	Pseudomonas_phage	46.6	1.7e-07
WP_049233966.1|4260004_4260406_+	hypothetical protein	NA	G3M5G1	Mycobacterium_phage	58.8	7.6e-34
WP_016893330.1|4260402_4260801_+	hypothetical protein	NA	A0A088F7V7	Mycobacterium_phage	52.0	5.4e-16
WP_053086262.1|4260907_4261171_+	hypothetical protein	NA	A0A1D8EX45	Mycobacterium_phage	70.1	2.4e-28
WP_049233971.1|4261167_4261620_+	AAA family ATPase	NA	A0A0F6SJL7	Mycobacterium_phage	66.7	2.2e-53
WP_049233975.1|4261783_4262179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049233979.1|4262150_4263788_+|terminase	terminase	terminase	A0A249XTN0	Mycobacterium_phage	75.8	6.1e-239
WP_049233983.1|4263802_4265251_+	hypothetical protein	NA	A0A249XTF7	Mycobacterium_phage	71.6	3.8e-168
WP_049233986.1|4265244_4266498_+	peptidase S14	NA	A0A1B3AZ47	Gordonia_phage	51.5	5.4e-86
WP_049233989.1|4266501_4266879_+	hypothetical protein	NA	W8EH90	Mycobacterium_phage	83.2	3.7e-46
WP_049233993.1|4266895_4267807_+	hypothetical protein	NA	A0A2K9VEV5	Mycobacterium_phage	80.4	7.5e-138
WP_016341855.1|4267806_4268256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049233998.1|4268260_4268623_+	hypothetical protein	NA	A0A218M9J6	Mycobacterium_phage	57.5	9.3e-31
WP_049234002.1|4268622_4269030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049234006.1|4269029_4269389_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_049234007.1|4269388_4269799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049234009.1|4269896_4270976_+	hypothetical protein	NA	A0A2H4PED2	Mycobacterium_phage	46.5	1.1e-63
WP_049234012.1|4271075_4271522_+	hypothetical protein	NA	A0A0A7RVK9	Mycobacterium_phage	43.0	1.7e-26
WP_005070934.1|4271583_4271946_+	hypothetical protein	NA	A0A2P1JR40	Mycobacterium_phage	62.6	1.7e-29
WP_049234016.1|4271960_4275611_+	hypothetical protein	NA	A0A0B5H802	Mycobacterium_phage	43.1	2.2e-204
WP_049234017.1|4275607_4277338_+	hypothetical protein	NA	A0A1I9SC71	Mycobacterium_phage	58.8	1.1e-198
WP_079454451.1|4277378_4279085_+	hypothetical protein	NA	A0A097EYM8	Mycobacterium_phage	77.8	2.0e-269
WP_005123204.1|4279100_4279940_+	hypothetical protein	NA	A0A142K812	Mycobacterium_phage	53.9	2.7e-81
WP_049234022.1|4279936_4282384_+	hypothetical protein	NA	A0A2P1JZR8	Mycobacterium_phage	30.2	8.8e-48
WP_049234025.1|4282467_4283439_+	hypothetical protein	NA	A0A059VL91	Mycobacterium_phage	55.0	4.6e-24
WP_005061750.1|4283461_4283917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049234029.1|4283936_4284299_+	hypothetical protein	NA	A0A1C9EGR9	Mycobacterium_phage	81.5	6.8e-50
WP_005061757.1|4284441_4285089_+	M15 family metallopeptidase	NA	A0A0K1LIU2	Mycobacterium_phage	76.3	4.6e-97
WP_005070962.1|4285085_4286261_+	hypothetical protein	NA	A0A1X9SFG9	Mycobacterium_phage	70.3	2.8e-124
>prophage 5
NZ_CP012044	Mycobacteroides abscessus UC22 chromosome, complete genome	5257136	4460940	4470433	5257136		Burkholderia_phage(25.0%)	8	NA	NA
WP_049234105.1|4460940_4462065_-	acyltransferase	NA	A9YX16	Burkholderia_phage	28.7	2.1e-20
WP_005085927.1|4462061_4463330_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
WP_005062157.1|4463379_4464180_-	macrocin O-methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
WP_017206146.1|4464396_4465131_-	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	4.0e-12
WP_005086341.1|4465321_4466452_-	acyltransferase	NA	A9YX16	Burkholderia_phage	27.6	4.1e-16
WP_005085923.1|4466619_4467681_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3IB24	Synechococcus_phage	26.1	4.1e-18
WP_005094865.1|4467844_4469104_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	1.6e-05
WP_005062166.1|4469566_4470433_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
