assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001047215.2_ASM104721v2	NZ_CP012022	Corynebacterium pseudotuberculosis strain 262 chromosome, complete genome	1	25684-26017	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	Type I-E	GGAACTACCTCCGCATACGCGGAGAAAAG,GGAACTACCTCCGCATACGCGGAGAAAAG,GGAACTACCTCCGCATACGCGGAGAAAAG	29,29,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	5,5,5	5	TypeI-E	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	NA|224aa|up_8|NZ_CP012022.2_19059_19731_-,NA|58aa|up_5|NZ_CP012022.2_21195_21369_+,NA|84aa|up_4|NZ_CP012022.2_21892_22144_+,NA|75aa|up_3|NZ_CP012022.2_22436_22661_-,NA|60aa|up_1|NZ_CP012022.2_24069_24249_+,cas8e|537aa|down_3|NZ_CP012022.2_30993_32604_+	NA|258aa|up_9|NZ_CP012022.2_16772_17546_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|224aa|up_8|NZ_CP012022.2_19059_19731_-	NA	NA|179aa|up_7|NZ_CP012022.2_19808_20345_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|257aa|up_6|NZ_CP012022.2_20406_21177_+	pfam01694, Rhomboid, Rhomboid family	NA|58aa|up_5|NZ_CP012022.2_21195_21369_+	NA	NA|84aa|up_4|NZ_CP012022.2_21892_22144_+	NA	NA|75aa|up_3|NZ_CP012022.2_22436_22661_-	NA	NA|423aa|up_2|NZ_CP012022.2_22741_24010_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|60aa|up_1|NZ_CP012022.2_24069_24249_+	NA	NA|448aa|up_0|NZ_CP012022.2_24265_25609_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|124aa|down_0|NZ_CP012022.2_26035_26407_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|down_1|NZ_CP012022.2_26407_27361_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|237aa|down_2|NZ_CP012022.2_30072_30783_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas8e|537aa|down_3|NZ_CP012022.2_30993_32604_+	NA	cse2gr11|198aa|down_4|NZ_CP012022.2_32600_33194_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|357aa|down_5|NZ_CP012022.2_33193_34264_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|231aa|down_6|NZ_CP012022.2_34275_34968_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|347aa|down_7|NZ_CP012022.2_35042_36083_-	pfam10551, MULE, MULE transposase domain	NA|308aa|down_8|NZ_CP012022.2_36491_37415_+	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins	NA|289aa|down_9|NZ_CP012022.2_37467_38334_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
GCF_001047215.2_ASM104721v2	NZ_CP012022	Corynebacterium pseudotuberculosis strain 262 chromosome, complete genome	2	1837535-1837747	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	DinG,csa3	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	Type IV-A, Type I-A?	CGGAACTACCTCCGCGTGCGCGGAGAAAAGA,CTTTTCTCCGCGCACGCGGAGGTAGTTCC,CTTTTCTCCGCGCACGCGGAGGTAGTTCC	31,29,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	2,3,3	3	Orphan	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	NA,NA|59aa|down_0|NZ_CP012022.2_1837838_1838015_-,NA|103aa|down_1|NZ_CP012022.2_1838724_1839033_-,NA|48aa|down_2|NZ_CP012022.2_1839398_1839542_+,NA|98aa|down_3|NZ_CP012022.2_1839669_1839963_+,NA|75aa|down_7|NZ_CP012022.2_1841982_1842207_+,NA|277aa|down_8|NZ_CP012022.2_1842347_1843178_+,NA|100aa|down_9|NZ_CP012022.2_1843190_1843490_+	NA|245aa|up_9|NZ_CP012022.2_1827411_1828146_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|256aa|up_8|NZ_CP012022.2_1828184_1828952_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|298aa|up_7|NZ_CP012022.2_1829024_1829918_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|273aa|up_6|NZ_CP012022.2_1829991_1830810_-	pfam01694, Rhomboid, Rhomboid family	NA|179aa|up_5|NZ_CP012022.2_1830896_1831433_-	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|100aa|up_4|NZ_CP012022.2_1831527_1831827_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|453aa|up_3|NZ_CP012022.2_1832033_1833392_+	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	DinG|665aa|up_2|NZ_CP012022.2_1833444_1835439_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|166aa|up_1|NZ_CP012022.2_1835462_1835960_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|428aa|up_0|NZ_CP012022.2_1835956_1837240_-	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|59aa|down_0|NZ_CP012022.2_1837838_1838015_-	NA	NA|103aa|down_1|NZ_CP012022.2_1838724_1839033_-	NA	NA|48aa|down_2|NZ_CP012022.2_1839398_1839542_+	NA	NA|98aa|down_3|NZ_CP012022.2_1839669_1839963_+	NA	NA|51aa|down_4|NZ_CP012022.2_1841270_1841423_-	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|53aa|down_5|NZ_CP012022.2_1841362_1841521_-	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|79aa|down_6|NZ_CP012022.2_1841596_1841833_-	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|75aa|down_7|NZ_CP012022.2_1841982_1842207_+	NA	NA|277aa|down_8|NZ_CP012022.2_1842347_1843178_+	NA	NA|100aa|down_9|NZ_CP012022.2_1843190_1843490_+	NA
GCF_001047215.2_ASM104721v2	NZ_CP012022	Corynebacterium pseudotuberculosis strain 262 chromosome, complete genome	3	2126067-2126151	3	CRISPRCasFinder	no		cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	Orphan	GTACCACCAGCCGCCGTGCCGCCAG	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,cas3,WYL,cas4,csa3,DinG	NA|262aa|up_8|NZ_CP012022.2_2112418_2113204_-,NA	NA|1866aa|up_9|NZ_CP012022.2_2106818_2112416_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|262aa|up_8|NZ_CP012022.2_2112418_2113204_-	NA	NA|292aa|up_7|NZ_CP012022.2_2113208_2114084_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|454aa|up_6|NZ_CP012022.2_2114431_2115793_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|222aa|up_5|NZ_CP012022.2_2115836_2116502_-	cd03257, ABC_NikE_OppD_transporters, ATP-binding cassette domain of nickel/oligopeptides specific transporters	NA|559aa|up_4|NZ_CP012022.2_2116494_2118171_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|332aa|up_3|NZ_CP012022.2_2118163_2119159_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|547aa|up_2|NZ_CP012022.2_2119239_2120880_-	cd08518, PBP2_NikA_DppA_OppA_like_19, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|535aa|up_1|NZ_CP012022.2_2121103_2122708_-	pfam01384, PHO4, Phosphate transporter family	NA|171aa|up_0|NZ_CP012022.2_2122947_2123460_+	PTZ00188, PTZ00188, adrenodoxin reductase; Provisional	NA|219aa|down_0|NZ_CP012022.2_2126378_2127035_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|104aa|down_1|NZ_CP012022.2_2127044_2127356_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|356aa|down_2|NZ_CP012022.2_2128144_2129212_-	pfam01032, FecCD, FecCD transport family	NA|337aa|down_3|NZ_CP012022.2_2129230_2130241_-	cd01148, TroA_a, Metal binding protein TroA_a	NA|293aa|down_4|NZ_CP012022.2_2130839_2131718_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|205aa|down_5|NZ_CP012022.2_2131718_2132333_-	cd05540, UreG, urease accessory protein UreG	NA|240aa|down_6|NZ_CP012022.2_2132356_2133076_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|159aa|down_7|NZ_CP012022.2_2133056_2133533_-	cd00571, UreE, UreE urease accessory protein	NA|570aa|down_8|NZ_CP012022.2_2133666_2135376_-	PRK13207, ureC, urease subunit alpha; Reviewed	NA|104aa|down_9|NZ_CP012022.2_2135443_2135755_-	PRK13203, ureB, urease subunit beta; Reviewed
