assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001042695.1_ASM104269v1	NZ_AP012334	Scardovia inopinata JCM 12537	1	389690-389804	1	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	Orphan	TGGTAAAATTACCAATTTCTCGTAATAGA	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	NA,NA	NA|244aa|up_9|NZ_AP012334.1_366551_367283_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|1571aa|up_8|NZ_AP012334.1_367413_372126_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|1579aa|up_7|NZ_AP012334.1_372158_376895_+	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|266aa|up_6|NZ_AP012334.1_377081_377879_+	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|610aa|up_5|NZ_AP012334.1_379342_381172_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|874aa|up_4|NZ_AP012334.1_381331_383953_+	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|471aa|up_3|NZ_AP012334.1_384003_385416_+	PRK14318, glmM, phosphoglucosamine mutase; Provisional	NA|231aa|up_2|NZ_AP012334.1_385439_386132_+	PRK00150, def, peptide deformylase; Reviewed	NA|665aa|up_1|NZ_AP012334.1_386198_388193_-	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST)	NA|445aa|up_0|NZ_AP012334.1_388291_389626_+	COG3572, GshA, Gamma-glutamylcysteine synthetase [Coenzyme metabolism]	NA|317aa|down_0|NZ_AP012334.1_389979_390930_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|478aa|down_1|NZ_AP012334.1_391082_392516_+	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	NA|390aa|down_2|NZ_AP012334.1_392600_393770_+	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|444aa|down_3|NZ_AP012334.1_393933_395265_+	PRK09330, PRK09330, cell division protein FtsZ; Validated	NA|159aa|down_4|NZ_AP012334.1_395332_395809_+	pfam04472, SepF, Cell division protein SepF	NA|95aa|down_5|NZ_AP012334.1_395841_396126_+	pfam02325, YGGT, YGGT family	NA|486aa|down_6|NZ_AP012334.1_396220_397678_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|176aa|down_7|NZ_AP012334.1_397720_398248_+	PRK14771, PRK14771, lipoprotein signal peptidase; Provisional	NA|312aa|down_8|NZ_AP012334.1_398240_399176_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|1188aa|down_9|NZ_AP012334.1_399218_402782_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated
GCF_001042695.1_ASM104269v1	NZ_AP012334	Scardovia inopinata JCM 12537	2	457243-457419	2	CRISPRCasFinder	no	cas9,cas1,cas2	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	 or Type II-C?, Type II-B,Type II-C,Type II-A,Type II-B	TGATCGTTCCGACCGCGCCGACCG	24	1	1	457375-457395	NZ_AP012334.1_457411-457431	NA	3	3	orTypeII-C?,TypeII-C,TypeII-B,TypeII-A,TypeII-B	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	NA|673aa|up_3|NZ_AP012334.1_450705_452724_-,NA|219aa|up_2|NZ_AP012334.1_452971_453628_+,NA	NA|371aa|up_9|NZ_AP012334.1_444979_446092_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|104aa|up_8|NZ_AP012334.1_446113_446425_+	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|530aa|up_7|NZ_AP012334.1_446624_448214_+	PRK07208, PRK07208, hypothetical protein; Provisional	NA|124aa|up_6|NZ_AP012334.1_448413_448785_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|266aa|up_5|NZ_AP012334.1_448950_449748_+	TIGR02227, Inactive_signal_peptidase_IA	NA|280aa|up_4|NZ_AP012334.1_449845_450685_+	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|673aa|up_3|NZ_AP012334.1_450705_452724_-	NA	NA|219aa|up_2|NZ_AP012334.1_452971_453628_+	NA	NA|148aa|up_1|NZ_AP012334.1_453786_454230_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|90aa|up_0|NZ_AP012334.1_454354_454624_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|559aa|down_0|NZ_AP012334.1_458621_460298_-	cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily	NA|476aa|down_1|NZ_AP012334.1_460385_461813_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|429aa|down_2|NZ_AP012334.1_461978_463265_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	cas9|1171aa|down_3|NZ_AP012334.1_463922_467435_+	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	cas1|304aa|down_4|NZ_AP012334.1_467444_468356_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|111aa|down_5|NZ_AP012334.1_468355_468688_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|1064aa|down_6|NZ_AP012334.1_471317_474509_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|567aa|down_7|NZ_AP012334.1_474570_476271_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|396aa|down_8|NZ_AP012334.1_476263_477451_+	COG0732, HsdS, Restriction endonuclease S subunits [Defense mechanisms]	NA|310aa|down_9|NZ_AP012334.1_477543_478473_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
GCF_001042695.1_ASM104269v1	NZ_AP012334	Scardovia inopinata JCM 12537	3	468739-470631	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	 or Type II-C?, Type II-B,Type II-C,Type II-A,Type II-B	CCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGC,CCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGC,CCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGC	36,36,36	1	2	469608-469635|469608-469635	NZ_AP012334.1_24631-24604|NZ_AP012334.1_25248-25221	NA:NA:NA	29,29,22	29	orTypeII-C?,TypeII-C,TypeII-B,TypeII-A,TypeII-B	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	NA|219aa|up_9|NZ_AP012334.1_452971_453628_+,NA	NA|219aa|up_9|NZ_AP012334.1_452971_453628_+	NA	NA|148aa|up_8|NZ_AP012334.1_453786_454230_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|90aa|up_7|NZ_AP012334.1_454354_454624_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|954aa|up_6|NZ_AP012334.1_454975_457837_+	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|559aa|up_5|NZ_AP012334.1_458621_460298_-	cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily	NA|476aa|up_4|NZ_AP012334.1_460385_461813_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|429aa|up_3|NZ_AP012334.1_461978_463265_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	cas9|1171aa|up_2|NZ_AP012334.1_463922_467435_+	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	cas1|304aa|up_1|NZ_AP012334.1_467444_468356_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|111aa|up_0|NZ_AP012334.1_468355_468688_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|1064aa|down_0|NZ_AP012334.1_471317_474509_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|567aa|down_1|NZ_AP012334.1_474570_476271_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|396aa|down_2|NZ_AP012334.1_476263_477451_+	COG0732, HsdS, Restriction endonuclease S subunits [Defense mechanisms]	NA|310aa|down_3|NZ_AP012334.1_477543_478473_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|249aa|down_4|NZ_AP012334.1_478579_479326_-	cd17250, RMtype1_S_Eco4255II_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Escherichia coli O118:H16 07-4255 S subunit (S	NA|426aa|down_5|NZ_AP012334.1_480710_481988_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|290aa|down_6|NZ_AP012334.1_482185_483055_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|277aa|down_7|NZ_AP012334.1_483059_483890_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|453aa|down_8|NZ_AP012334.1_483934_485293_+	pfam11175, DUF2961, Protein of unknown function (DUF2961)	NA|499aa|down_9|NZ_AP012334.1_485372_486869_+	cd08996, GH32_FFase, Glycosyl hydrolase family 32, beta-fructosidases
GCF_001042695.1_ASM104269v1	NZ_AP012334	Scardovia inopinata JCM 12537	4	742761-742848	4	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	Orphan	GGAGCAGCACCTACGGGGGCAGTTCTTA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,cas3,WYL,csa3	NA,NA|83aa|down_6|NZ_AP012334.1_749587_749836_+	NA|120aa|up_9|NZ_AP012334.1_727698_728058_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|429aa|up_8|NZ_AP012334.1_728054_729341_-	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|169aa|up_7|NZ_AP012334.1_729562_730069_+	PRK07116, PRK07116, flavodoxin; Provisional	NA|255aa|up_6|NZ_AP012334.1_730203_730968_+	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain	NA|536aa|up_5|NZ_AP012334.1_731092_732700_+	pfam13208, TerB_N, TerB N-terminal domain	NA|438aa|up_4|NZ_AP012334.1_732728_734042_+	pfam10923, DUF2791, P-loop Domain of unknown function (DUF2791)	NA|762aa|up_3|NZ_AP012334.1_734112_736398_+	COG1201, Lhr, Lhr-like helicases [General function prediction only]	NA|225aa|up_2|NZ_AP012334.1_736403_737078_+	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional	NA|305aa|up_1|NZ_AP012334.1_737116_738031_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|462aa|up_0|NZ_AP012334.1_738152_739538_-	TIGR03173, pbuX, xanthine permease	NA|514aa|down_0|NZ_AP012334.1_743207_744749_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|209aa|down_1|NZ_AP012334.1_744980_745607_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|404aa|down_2|NZ_AP012334.1_745826_747038_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|295aa|down_3|NZ_AP012334.1_747168_748053_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|258aa|down_4|NZ_AP012334.1_748265_749039_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|149aa|down_5|NZ_AP012334.1_749129_749576_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|83aa|down_6|NZ_AP012334.1_749587_749836_+	NA	NA|901aa|down_7|NZ_AP012334.1_750084_752787_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|167aa|down_8|NZ_AP012334.1_752779_753280_+	pfam03652, RuvX, Holliday junction resolvase	NA|408aa|down_9|NZ_AP012334.1_753276_754500_+	pfam02618, YceG, YceG-like family
