The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	532555	552773	4501450	integrase,lysis	Enterobacteria_phage(63.16%)	25	531323:531336	538640:538653
531323:531336	attL	GTTGCGATTTTATT	NA	NA	NA	NA
WP_001318654.1|532555_533719_-|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	86.0	1.3e-198
WP_000446905.1|533574_533946_-	helix-turn-helix domain-containing protein	NA	M1FJ59	Enterobacteria_phage	81.0	2.1e-46
WP_000488419.1|533917_534196_-	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	98.9	1.7e-48
WP_000763373.1|534243_534462_-	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	95.8	1.8e-34
WP_001386642.1|534560_534842_-	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
WP_001070454.1|535557_535890_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_001299444.1|535937_536087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000709082.1|536144_537671_+	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	27.8	7.9e-31
WP_001306955.1|538135_538687_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA	NA
538640:538653	attR	AATAAAATCGCAAC	NA	NA	NA	NA
WP_000881075.1|538696_539494_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001303586.1|539610_539712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001054340.1|539708_540164_+	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.9	4.1e-60
WP_000224907.1|540163_540334_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	5.3e-13
WP_000774479.1|540326_540617_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
WP_001099655.1|540613_540976_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	97.4	7.3e-60
WP_000971071.1|540972_541113_+	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	2.5e-08
WP_001204780.1|541198_541582_+	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	84.2	4.0e-56
WP_000839596.1|544219_544435_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_001135280.1|544434_544932_+	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	97.6	1.1e-90
WP_001228695.1|545148_545331_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_000738423.1|545421_545715_-	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	91.8	2.0e-44
WP_001415975.1|546075_546270_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.9	4.3e-27
WP_072094231.1|547330_549139_+	host specificity protein J	NA	Q9EYE7	Enterobacteria_phage	88.4	7.6e-307
WP_000253837.1|550651_552100_-	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	NA	NA	NA	NA
WP_000770941.1|552089_552773_-	copper response regulator transcription factor CusR	NA	W8CYM9	Bacillus_phage	34.7	2.3e-30
>prophage 2
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	748162	787487	4501450	tail,portal,lysis,capsid,protease,holin,head,terminase	Enterobacteria_phage(90.38%)	52	NA	NA
WP_000805902.1|748162_749245_+	DNA-binding transcriptional repressor LacI	NA	C6ZCU4	Enterobacteria_phage	100.0	7.5e-193
WP_001092355.1|749847_752499_+	hypothetical protein	NA	C1KTT1	Enterobacteria_phage	100.0	0.0e+00
WP_002414258.1|753407_753626_-	excisionase	NA	C6ZCU6	Enterobacteria_phage	100.0	1.3e-35
WP_000545733.1|753665_753833_-	hypothetical protein	NA	A0A0K2FJ46	Enterobacteria_phage	100.0	1.3e-27
WP_000026224.1|753921_754203_-	hypothetical protein	NA	A0A0K2FIU9	Enterobacteria_phage	100.0	2.8e-51
WP_001289873.1|754394_754943_-	ead/Ea22-like family protein	NA	A0A0K2FJF6	Enterobacteria_phage	100.0	2.2e-100
WP_000763367.1|754939_755161_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	100.0	2.9e-35
WP_000548551.1|755552_755744_-	DUF1382 family protein	NA	A0A0K2FJ42	Enterobacteria_phage	100.0	2.8e-26
WP_000149542.1|755716_755899_-	DUF1317 domain-containing protein	NA	A0A1U8QQC1	Enterobacteria_phage	100.0	1.6e-28
WP_000186891.1|755895_756576_-	YqaJ viral recombinase family protein	NA	C6ZCV3	Enterobacteria_phage	100.0	3.5e-132
WP_000100844.1|756572_757358_-	phage recombination protein Bet	NA	A0A0K2FJF1	Enterobacteria_phage	100.0	1.4e-148
WP_000995451.1|757363_757660_-	host-nuclease inhibitor protein Gam	NA	C6ZCV5	Enterobacteria_phage	100.0	2.1e-49
WP_000372937.1|757734_757878_-	host cell division inhibitory peptide Kil	NA	A0A0N7C2U2	Escherichia_phage	100.0	1.2e-18
WP_001198861.1|757846_758011_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	100.0	1.1e-26
WP_000065374.1|758083_758452_-	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	100.0	2.0e-65
WP_000213975.1|758634_758835_-	Restriction inhibitor protein ral	NA	A0A0K2FJE6	Enterobacteria_phage	100.0	1.4e-33
WP_000256575.1|758913_759213_-	hypothetical protein	NA	C6ZCW1	Enterobacteria_phage	100.0	3.8e-46
WP_001095982.1|759527_760178_-	LexA family transcriptional regulator	NA	K7PM82	Enterobacteria_phage	100.0	4.9e-123
WP_000276885.1|760258_760444_+	hypothetical protein	NA	K7PHK4	Enterobacteria_phage	100.0	1.2e-26
WP_000035954.1|760559_760859_+	hypothetical protein	NA	C6ZCW4	Enterobacteria_phage	100.0	2.1e-49
WP_000185505.1|760891_761791_+	replication protein	NA	A0A0K2FJ31	Enterobacteria_phage	100.0	3.8e-174
WP_000788910.1|761787_762489_+	hypothetical protein	NA	A0A0K2FIT1	Enterobacteria_phage	100.0	7.6e-130
WP_000145932.1|762485_763289_+	serine/threonine protein phosphatase	NA	C6ZCW7	Enterobacteria_phage	100.0	1.6e-155
WP_001235469.1|763285_763909_+	antitermination protein	NA	C6ZCW8	Enterobacteria_phage	100.0	1.8e-114
WP_000783735.1|764585_764909_+|holin	phage holin, lambda family	holin	A0A0K2FJ23	Enterobacteria_phage	100.0	1.3e-52
WP_000229403.1|764892_765369_+	glycoside hydrolase family protein	NA	A0A0K2FIS2	Enterobacteria_phage	100.0	4.4e-89
WP_012738274.1|765585_765768_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	100.0	1.7e-17
WP_000738491.1|765858_766152_-	serum resistance lipoprotein Bor	NA	C6ZCX3	Enterobacteria_phage	100.0	4.0e-48
WP_012775990.1|766441_766852_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	100.0	2.5e-72
WP_001031427.1|767137_767344_+	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
WP_001421937.1|767508_767703_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	100.0	8.7e-28
WP_000453580.1|768091_768637_+	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	100.0	2.8e-95
WP_001027292.1|768611_770537_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	100.0	0.0e+00
WP_000198149.1|770533_770740_+|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001359455.1|770736_772338_+|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	100.0	5.9e-312
WP_000123343.1|772318_773638_+	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	100.0	7.9e-237
WP_001297109.1|773647_773980_+|head	head decoration protein	head	C6ZCY1	Enterobacteria_phage	100.0	2.2e-55
WP_000063280.1|774035_775061_+|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	100.0	7.1e-193
WP_000158919.1|775102_775501_+	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	100.0	3.1e-64
WP_000752979.1|775512_775866_+|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	100.0	2.0e-62
WP_000975070.1|775877_776456_+|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	100.0	2.7e-80
WP_000683105.1|776452_776848_+|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	100.0	1.0e-70
WP_001349920.1|776855_777596_+|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	100.0	7.8e-133
WP_000479153.1|777611_778034_+|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	100.0	6.7e-73
WP_000459457.1|778015_778450_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
WP_000840207.1|778442_781004_+|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	100.0	0.0e+00
WP_000847379.1|781000_781330_+|tail	phage tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	100.0	9.6e-59
WP_001152639.1|781329_782028_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	100.0	2.3e-134
WP_000194780.1|782033_782777_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	2.5e-147
WP_000090889.1|782713_783346_+|tail	tail assembly protein	tail	C6ZCZ4	Enterobacteria_phage	100.0	5.9e-97
WP_000515495.1|783406_786805_+	host specificity protein J	NA	C6ZCZ5	Enterobacteria_phage	100.0	0.0e+00
WP_001246632.1|786866_787487_+	outer membrane beta-barrel protein Lom	NA	A0A1U8QHD6	Enterobacteria_phage	100.0	8.3e-112
>prophage 3
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	871925	894884	4501450	tail,plate,integrase,portal,lysis,capsid,terminase	Salmonella_phage(63.64%)	29	868191:868205	875558:875572
868191:868205	attL	GCTGTCGCTGATGGT	NA	NA	NA	NA
WP_000290930.1|871925_872942_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	56.7	3.2e-105
WP_001321204.1|873128_873320_-	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	68.2	4.0e-09
WP_001047321.1|873335_873905_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	43.4	3.8e-39
WP_001247707.1|874030_874252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000460887.1|874284_875730_+	hypothetical protein	NA	E5G6L9	Salmonella_phage	97.0	4.5e-209
875558:875572	attR	ACCATCAGCGACAGC	NA	NA	NA	NA
WP_001154431.1|875882_876071_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
WP_001217575.1|876081_876315_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_001059831.1|876507_876843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001034589.1|877315_878239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001320043.1|878401_879364_+	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
WP_000520360.1|879381_880407_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
WP_001098413.1|880406_882173_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.1	0.0e+00
WP_000216259.1|882315_883068_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	94.7	3.1e-113
WP_000196203.1|883204_883633_+|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	88.7	8.1e-58
WP_001039932.1|883728_884160_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	93.0	3.8e-71
WP_000829156.1|884152_884599_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	83.7	7.6e-59
WP_000115390.1|884540_885347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000993743.1|885450_886029_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	85.9	3.6e-93
WP_000177591.1|886025_886385_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.7	8.0e-51
WP_000268294.1|886371_887280_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	91.1	4.1e-144
WP_001086815.1|887272_887878_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	93.0	2.3e-111
WP_000104800.1|887874_889497_+	hypothetical protein	NA	M1TAS6	Escherichia_phage	78.5	6.2e-151
WP_000280166.1|889498_889936_+|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	75.0	1.7e-55
WP_000368077.1|889907_890510_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	89.5	2.3e-98
WP_001318481.1|890509_891049_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	62.5	1.5e-56
WP_000972391.1|891810_892029_+	transcriptional activator Ogr/delta	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_001024876.1|892264_893950_-	aspartate:alanine antiporter	NA	NA	NA	NA	NA
WP_000681108.1|894219_894597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001195240.1|894626_894884_-	glutaredoxin 1	NA	A0A2I7SAE2	Vibrio_phage	61.9	8.6e-23
>prophage 4
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	1391157	1458355	4501450	integrase,transposase,lysis,tRNA	Escherichia_phage(34.48%)	64	1392009:1392025	1431125:1431141
WP_001301114.1|1391157_1392390_-	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	35.0	3.1e-17
1392009:1392025	attL	GTTTTTTGCGCTGATAA	NA	NA	NA	NA
WP_000387388.1|1392644_1393628_+	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_000123737.1|1394105_1395479_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_001157407.1|1395607_1396543_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
WP_000040858.1|1396594_1397830_-|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.5	1.6e-239
WP_000079604.1|1397831_1398047_-	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000276809.1|1398125_1398335_-	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_001317028.1|1398327_1398522_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000166319.1|1398578_1399388_-	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_000632297.1|1400581_1400857_-	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_001352098.1|1400931_1401102_-	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000560223.1|1401101_1401323_-	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	98.6	2.0e-36
WP_001312793.1|1401764_1402253_+	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_001169151.1|1402249_1402405_-	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_012775985.1|1402548_1402761_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	96.9	3.0e-29
WP_000193293.1|1402765_1403110_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	94.0	1.4e-36
WP_000370546.1|1403075_1403348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000992105.1|1403453_1403987_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	96.0	4.8e-100
WP_001228696.1|1404203_1404389_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_001097897.1|1404585_1406043_+	potassium transporter TrkG	NA	NA	NA	NA	NA
WP_012775984.1|1406180_1406576_+	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	58.7	3.1e-19
WP_000654171.1|1407257_1407536_+	hypothetical protein	NA	A0A0E3JSQ1	Enterobacteria_phage	55.4	2.9e-24
WP_000355360.1|1407548_1407842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000078178.1|1408069_1408660_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836768.1|1408976_1409210_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|1409278_1409392_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_001157925.1|1409731_1409905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001300461.1|1410170_1410605_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_000837924.1|1410745_1411879_-	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.8	8.3e-118
WP_000628173.1|1412245_1415770_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_001295715.1|1416043_1416310_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_001298828.1|1416306_1416729_-	heat shock protein HslJ	NA	NA	NA	NA	NA
WP_000762229.1|1416839_1417829_-	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	2.5e-70
WP_000900914.1|1418036_1420676_+	YdbH family protein	NA	NA	NA	NA	NA
WP_000698145.1|1420672_1420858_+	YnbE family lipoprotein	NA	NA	NA	NA	NA
WP_000752043.1|1420865_1421192_+	YdbL family protein	NA	NA	NA	NA	NA
WP_001320272.1|1421363_1422269_-	transcriptional regulator FeaR	NA	NA	NA	NA	NA
WP_000138605.1|1422504_1424004_+	phenylacetaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000169527.1|1426080_1426380_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000878218.1|1426376_1427243_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
WP_000471481.1|1427857_1430164_+	DUF2773 domain-containing bactofilin	NA	NA	NA	NA	NA
WP_000177526.1|1430334_1430940_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_000890940.1|1430939_1431836_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
1431125:1431141	attR	GTTTTTTGCGCTGATAA	NA	NA	NA	NA
WP_000431845.1|1431851_1433609_+	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000627365.1|1433598_1434915_+	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA	NA
WP_000048939.1|1434965_1435571_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_000139585.1|1435771_1439674_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	29.4	8.4e-53
WP_001027964.1|1439945_1440746_+	YdcF family protein	NA	NA	NA	NA	NA
WP_000115936.1|1440942_1442382_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000048667.1|1442423_1443425_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000428998.1|1444390_1444921_+	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	44.9	3.1e-19
WP_000731833.1|1445165_1445339_+	periplasmic protein	NA	A0A0R6PKG1	Moraxella_phage	67.4	4.4e-07
WP_001320773.1|1445410_1445560_-	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA	NA
WP_001098559.1|1445958_1447599_+	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA	NA
WP_000414567.1|1447636_1448560_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000013789.1|1448776_1450120_+	VOC family protein	NA	NA	NA	NA	NA
WP_000375961.1|1450344_1452000_+	glucan biosynthesis protein OpgD	NA	NA	NA	NA	NA
WP_001296778.1|1452139_1452364_+	YdcH family protein	NA	NA	NA	NA	NA
WP_000140873.1|1452426_1452966_+	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA	NA
WP_001234052.1|1452957_1453938_-	LbetaH domain-containing protein	NA	NA	NA	NA	NA
WP_001301046.1|1454061_1455054_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA	NA
WP_000586744.1|1455050_1455644_+	tellurite resistance methyltransferase TehB	NA	NA	NA	NA	NA
WP_001261013.1|1455946_1456615_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_000826416.1|1457146_1458355_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	93.0	1.7e-206
>prophage 5
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	1578176	1593799	4501450	transposase	Enterobacteria_phage(18.75%)	23	NA	NA
WP_000527826.1|1578176_1579637_-	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	29.3	2.8e-41
WP_000347482.1|1579725_1581009_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_120795384.1|1581612_1581726_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836768.1|1581794_1582028_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_000086527.1|1582343_1582934_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000355603.1|1583161_1583455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000235975.1|1583465_1584170_-	hypothetical protein	NA	A0A1X7QGH6	Escherichia_phage	62.3	5.4e-59
WP_001205170.1|1584179_1584461_-	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	47.8	4.5e-17
WP_000879385.1|1584460_1585714_-	hypothetical protein	NA	A0A0E3M194	Enterobacteria_phage	54.3	3.7e-127
WP_000896277.1|1586033_1586195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000169527.1|1586422_1586722_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000878219.1|1586718_1587585_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
WP_000780584.1|1587954_1588479_+	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	52.9	1.0e-46
WP_001204787.1|1588634_1589012_-	antitermination protein	NA	Q777W5	Enterobacteria_phage	82.5	1.8e-53
WP_001265279.1|1589029_1589680_-	DUF968 domain-containing protein	NA	Q8SBE5	Shigella_phage	70.3	2.6e-68
WP_012775982.1|1589681_1589960_-	hypothetical protein	NA	I6PCV7	Cronobacter_phage	48.4	5.7e-12
WP_000981003.1|1590026_1590278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000887491.1|1590494_1590707_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	97.1	1.7e-29
WP_000054497.1|1591311_1592277_-	hypothetical protein	NA	U5P0A0	Shigella_phage	60.2	5.0e-55
WP_000705360.1|1592257_1592779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000921596.1|1592762_1592990_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_000381212.1|1593070_1593478_+	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	51.9	7.2e-32
WP_000379591.1|1593646_1593799_+	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	6.6e-07
>prophage 6
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	2005498	2014355	4501450		Enterobacteria_phage(42.86%)	8	NA	NA
WP_000998544.1|2005498_2006611_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	25.7	1.3e-14
WP_001060532.1|2006620_2008045_-	O7 family O-antigen flippase	NA	NA	NA	NA	NA
WP_001100801.1|2008048_2008594_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.9	1.6e-47
WP_000857508.1|2008598_2009477_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	8.7e-107
WP_001023616.1|2009535_2010435_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.5	8.2e-28
WP_000699450.1|2010434_2011520_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	3.9e-101
WP_000183060.1|2011892_2012786_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	1.0e-46
WP_001115981.1|2012960_2014355_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	33.5	1.3e-19
>prophage 7
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	2102255	2111697	4501450		Enterobacteria_phage(85.71%)	10	NA	NA
WP_001300968.1|2102255_2103392_+	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	3.2e-162
WP_001300967.1|2103388_2105389_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	96.6	0.0e+00
WP_001296231.1|2105513_2105975_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
WP_001295430.1|2106015_2106486_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_000598641.1|2106532_2107252_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001483656.1|2107248_2108934_-	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.5	2.8e-303
WP_001240403.1|2109155_2109887_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001216966.1|2109946_2110054_+	protein YohO	NA	NA	NA	NA	NA
WP_000783120.1|2110034_2110766_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_000569344.1|2110770_2111697_-	glycine betaine ABC transporter ATP binding protein YehX	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	5.7e-08
>prophage 8
NZ_CP011938	Escherichia coli strain C43(DE3) chromosome, complete genome	4501450	2676118	2689301	4501450		Escherichia_phage(50.0%)	12	NA	NA
WP_001272928.1|2676118_2678680_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
WP_001141307.1|2678785_2679442_+	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	46.6	8.6e-51
WP_001272546.1|2679492_2680290_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	4.5e-70
WP_000847971.1|2680455_2681364_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
WP_000590371.1|2681360_2682623_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	4.9e-135
WP_001278994.1|2682619_2683258_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136925.1|2683262_2684039_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104459.1|2684127_2685492_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000081550.1|2685585_2686578_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272590.1|2686640_2687780_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|2687919_2688546_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|2688539_2689301_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
