The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009743	Burkholderia contaminans strain MS14 chromosome 1, complete sequence	3522585	2379167	2387456	3522585		Yaba_monkey_tumor_virus(16.67%)	8	NA	NA
WP_047850525.1|2379167_2380088_+	alpha/beta hydrolase	NA	Q6TUZ7	Yaba_monkey_tumor_virus	27.6	3.0e-17
WP_047850526.1|2380120_2381044_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.9	3.9e-41
WP_081421082.1|2381087_2382431_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_047850527.1|2382510_2383413_-	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	40.5	1.1e-53
WP_047850528.1|2383625_2383967_-	competence protein ComE	NA	NA	NA	NA	NA
WP_039343257.1|2384041_2385034_-	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	31.5	1.5e-27
WP_011351339.1|2385097_2386048_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	27.4	3.4e-16
WP_047850529.1|2386055_2387456_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	38.1	2.3e-77
>prophage 2
NZ_CP009743	Burkholderia contaminans strain MS14 chromosome 1, complete sequence	3522585	2573708	2584185	3522585		Enterobacteria_phage(50.0%)	7	NA	NA
WP_047850614.1|2573708_2577428_-	glycosyltransferase	NA	A0A1X9SJW0	Sulfolobus_islandicus_rod-shaped_virus	26.0	3.7e-05
WP_047851118.1|2577427_2578756_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_046545068.1|2579111_2580557_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.5	3.7e-54
WP_047850615.1|2580789_2581674_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.6	1.2e-26
WP_047850616.1|2581682_2582234_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.0	8.0e-50
WP_046545065.1|2582218_2583112_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.5	6.3e-97
WP_047850617.1|2583123_2584185_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.7	3.7e-88
>prophage 3
NZ_CP009743	Burkholderia contaminans strain MS14 chromosome 1, complete sequence	3522585	2703603	2712701	3522585		unidentified_phage(16.67%)	7	NA	NA
WP_046544993.1|2703603_2705154_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	31.0	1.1e-22
WP_046544992.1|2705189_2705732_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_047850666.1|2705728_2706415_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	25.4	1.4e-06
WP_046544991.1|2706460_2707276_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	32.5	2.0e-36
WP_047850667.1|2707396_2709331_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	NA	S4VNU7	Pandoravirus	36.7	6.9e-56
WP_046544989.1|2709344_2710481_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	39.1	9.1e-24
WP_046544988.1|2710748_2712701_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	49.8	1.6e-148
>prophage 1
NZ_CP009744	Burkholderia contaminans strain MS14 chromosome 2, complete sequence	3358952	969686	997318	3358952	plate,protease,integrase	Burkholderia_phage(50.0%)	23	963841:963856	984302:984317
963841:963856	attL	GGTCTTTCGATACAAA	NA	NA	NA	NA
WP_046544802.1|969686_970214_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	52.0	9.7e-21
WP_081421165.1|970384_970600_-|integrase	integrase	integrase	E5E3T0	Burkholderia_phage	76.2	1.2e-25
WP_081421166.1|970649_971108_-	hypothetical protein	NA	E5E3T0	Burkholderia_phage	83.5	6.4e-53
WP_124473431.1|971552_971810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047851554.1|972370_973105_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_081421264.1|973106_974492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047851556.1|974606_975149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011350748.1|975506_975710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046544806.1|975769_976570_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_047851557.1|976893_980073_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.6	9.3e-58
WP_152034446.1|984771_985353_+	hypothetical protein	NA	NA	NA	NA	NA
984302:984317	attR	TTTGTATCGAAAGACC	NA	NA	NA	NA
WP_046544808.1|986014_986356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047851558.1|986619_986937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046544810.1|987026_987809_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_039352024.1|987805_989152_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_039352027.1|989255_989867_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_046544811.1|990241_990871_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_027783377.1|990917_991433_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_006477094.1|991448_992939_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_006477093.1|993009_993513_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_046544812.1|993855_994341_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_039352038.1|994418_996254_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_047851559.1|996217_997318_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 2
NZ_CP009744	Burkholderia contaminans strain MS14 chromosome 2, complete sequence	3358952	3157387	3208117	3358952	protease,head,tail,portal,plate,terminase,integrase,capsid,holin	Pseudomonas_phage(34.38%)	66	3191506:3191522	3211954:3211970
WP_047852443.1|3157387_3158176_-	DNA adenine methylase	NA	Q8W6S4	Burkholderia_virus	88.2	3.3e-142
WP_047852444.1|3158362_3158569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852445.1|3159284_3159752_-	DUF2514 family protein	NA	C7BGD9	Burkholderia_phage	70.1	1.2e-43
WP_047852446.1|3159741_3160050_-|holin	holin	holin	C7BGD7	Burkholderia_phage	40.9	8.2e-12
WP_047852447.1|3160060_3160441_-	M15 family metallopeptidase	NA	S4TRL9	Salmonella_phage	73.6	9.1e-45
WP_053060295.1|3160635_3161373_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_047852448.1|3161382_3161814_-	hypothetical protein	NA	R4JMH4	Burkholderia_phage	62.7	1.0e-44
WP_047852449.1|3162799_3163366_-	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_047852450.1|3163389_3164436_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	48.4	1.5e-84
WP_047852451.1|3164407_3164836_-	hypothetical protein	NA	B5TK74	Pseudomonas_phage	47.0	1.0e-23
WP_081421245.1|3164832_3165411_-|plate	phage baseplate assembly protein	plate	B5TK73	Pseudomonas_phage	52.2	3.8e-34
WP_047852452.1|3165407_3166523_-|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	54.4	3.1e-101
WP_047852453.1|3166523_3167762_-	hypothetical protein	NA	B5TK71	Pseudomonas_phage	38.5	5.7e-80
WP_047852454.1|3167769_3169707_-|tail	phage tail tape measure protein	tail	U5P420	Shigella_phage	50.7	8.9e-112
WP_047852455.1|3169840_3170137_-|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	50.0	2.3e-19
WP_047852456.1|3170127_3170475_-|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	52.2	4.1e-28
WP_047852457.1|3170544_3172041_-|tail	tail sheath protein	tail	B5TK67	Pseudomonas_phage	55.6	8.9e-152
WP_047852458.1|3172037_3172268_-	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	62.5	7.2e-05
WP_047852459.1|3172264_3172855_-	hypothetical protein	NA	B5TK65	Pseudomonas_phage	43.9	5.9e-35
WP_047852460.1|3172862_3173333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047852461.1|3173325_3173658_-|head	phage head closure protein	head	Q8HAC9	Salmonella_phage	45.7	1.4e-17
WP_047852462.1|3173657_3174152_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_152034478.1|3174148_3174469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047852464.1|3174485_3175760_-|capsid	phage major capsid protein	capsid	A4JX01	Burkholderia_virus	46.4	1.5e-99
WP_160313566.1|3175837_3176728_-	S49 family peptidase	NA	F8QZT1	Wolbachia_phage	41.3	3.5e-47
WP_081421248.1|3176769_3178020_-|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	38.6	8.1e-66
WP_047852465.1|3178023_3179691_-|terminase	terminase large subunit	terminase	A0A0U4B0C7	Pseudomonas_phage	44.2	4.0e-129
WP_053060301.1|3179687_3180176_-|terminase	phage terminase small subunit P27 family	terminase	D0R0C9	Streptococcus_phage	31.0	8.7e-16
WP_047852466.1|3180276_3180690_-	HNH endonuclease	NA	C7BGG5	Burkholderia_phage	59.0	3.5e-34
WP_047852467.1|3180823_3181231_-	hypothetical protein	NA	C7BGG3	Burkholderia_phage	53.3	9.4e-32
WP_081421250.1|3181243_3182218_-	helix-turn-helix domain-containing protein	NA	C7BGG2	Burkholderia_phage	43.3	1.1e-65
WP_047852468.1|3182220_3183582_-	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	57.5	5.2e-143
WP_047852469.1|3183580_3183928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852470.1|3183967_3184489_-	hypothetical protein	NA	C7BGG0	Burkholderia_phage	62.1	3.2e-48
WP_081421251.1|3184876_3185176_-	hypothetical protein	NA	K7PHA1	Enterobacteria_phage	43.7	3.1e-08
WP_152034479.1|3185324_3185702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160313567.1|3186221_3186383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852473.1|3186650_3186857_+	hypothetical protein	NA	C7BGF3	Burkholderia_phage	83.8	3.4e-22
WP_081421252.1|3187172_3187724_+	PRTRC system protein E	NA	NA	NA	NA	NA
WP_063794581.1|3187737_3188127_+	PRTRC system protein C	NA	NA	NA	NA	NA
WP_047852475.1|3188123_3188309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852476.1|3188305_3189385_+	PRTRC system protein F	NA	NA	NA	NA	NA
WP_047852477.1|3189381_3190092_+	PRTRC system protein B	NA	NA	NA	NA	NA
WP_152034480.1|3190096_3190903_+	PRTRC system protein A	NA	NA	NA	NA	NA
WP_047852717.1|3190908_3191661_+	PRTRC system ThiF family protein	NA	NA	NA	NA	NA
3191506:3191522	attL	GCCGAGGCGCTCGAGCG	NA	NA	NA	NA
WP_047852479.1|3192844_3193150_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_047852480.1|3193146_3194157_-|integrase	site-specific integrase	integrase	A0A0A0YR56	Pseudomonas_phage	50.9	4.4e-70
WP_047852481.1|3194515_3195733_+|integrase	tyrosine-type recombinase/integrase	integrase	B7SYF8	Stenotrophomonas_phage	44.1	4.0e-86
WP_152034481.1|3195812_3196418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081421253.1|3196934_3197192_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_047852719.1|3197196_3197487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852484.1|3197938_3198166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852485.1|3198158_3198551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162489650.1|3198547_3198733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152034482.1|3198660_3200046_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_047852486.1|3200042_3200474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852487.1|3200460_3200718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852488.1|3200976_3202137_+|capsid	phage major capsid protein	capsid	K7XS73	uncultured_Mediterranean_phage	26.1	1.1e-08
WP_053060305.1|3202605_3202980_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_081421256.1|3202963_3203545_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_152034483.1|3203861_3204185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852492.1|3204849_3205185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047852493.1|3205714_3206047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047852494.1|3206101_3206842_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_047852495.1|3206956_3207580_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_047852496.1|3207616_3208117_-|protease	serine protease inhibitor ecotin	protease	NA	NA	NA	NA
3211954:3211970	attR	CGCTCGAGCGCCTCGGC	NA	NA	NA	NA
>prophage 1
NZ_CP009745	Burkholderia contaminans strain MS14 chromosome 3, complete sequence	1627712	1396586	1425163	1627712	integrase,transposase	Burkholderia_phage(28.57%)	24	1392470:1392485	1422941:1422956
1392470:1392485	attL	CGATCGCTTTGGCTTC	NA	NA	NA	NA
WP_047853508.1|1396586_1397516_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_047853745.1|1397734_1398127_-	DUF2471 family protein	NA	NA	NA	NA	NA
WP_047853509.1|1398218_1398518_-	H-NS histone family protein	NA	F8TUP5	EBPR_podovirus	41.4	2.6e-10
WP_152034520.1|1399190_1399703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047853511.1|1399872_1403022_-	error-prone DNA polymerase	NA	A0A1B1PA77	Streptomyces_phage	27.9	8.2e-91
WP_047853512.1|1403028_1404507_-	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_047853513.1|1404427_1405144_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_047853514.1|1405340_1406093_+	DUF159 family protein	NA	C7BGE4	Burkholderia_phage	39.6	1.2e-35
WP_047853746.1|1406230_1406557_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_152034521.1|1406944_1407238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152034522.1|1407299_1407485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152034523.1|1407822_1408299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047853517.1|1408740_1409037_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_047853518.1|1410122_1411754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047853519.1|1411798_1413361_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	34.5	2.2e-68
WP_047853520.1|1413392_1413743_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	39.4	5.6e-17
WP_152034550.1|1413718_1414249_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_047853522.1|1417205_1418249_+	DUF1016 domain-containing protein	NA	Q9JMP5	Wolbachia_phage	53.8	3.2e-108
WP_162489657.1|1418956_1419094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047853523.1|1419135_1419669_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_047853524.1|1419684_1421295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047853525.1|1421732_1422725_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	84.5	6.7e-156
WP_160313579.1|1423141_1423564_-|transposase	transposase	transposase	NA	NA	NA	NA
1422941:1422956	attR	CGATCGCTTTGGCTTC	NA	NA	NA	NA
WP_081421365.1|1424149_1425163_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
