assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	1	68512-68741	1	CRT	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GAGTCCTTTGACACCGTCTCCG	22	1	1	68601-68630	NZ_CP011509.1_68482-68511	NA	4	4	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA,NA|596aa|down_1|NZ_CP011509.1_70165_71953_+,NA|311aa|down_6|NZ_CP011509.1_77756_78689_-	NA|151aa|up_9|NZ_CP011509.1_54587_55040_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|300aa|up_8|NZ_CP011509.1_55073_55973_-	pfam02517, Abi, CAAX protease self-immunity	NA|169aa|up_7|NZ_CP011509.1_55969_56476_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|264aa|up_6|NZ_CP011509.1_56603_57395_+	cd06561, AlkD_like, A new structural DNA glycosylase	NA|434aa|up_5|NZ_CP011509.1_57553_58855_+	pfam04536, TPM_phosphatase, TPM domain	NA|317aa|up_4|NZ_CP011509.1_58918_59869_-	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16	NA|1025aa|up_3|NZ_CP011509.1_61054_64129_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|438aa|up_2|NZ_CP011509.1_64282_65596_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|446aa|up_1|NZ_CP011509.1_65958_67296_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|311aa|up_0|NZ_CP011509.1_67447_68380_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|234aa|down_0|NZ_CP011509.1_68751_69453_-	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|596aa|down_1|NZ_CP011509.1_70165_71953_+	NA	NA|675aa|down_2|NZ_CP011509.1_72173_74198_+	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1	NA|397aa|down_3|NZ_CP011509.1_74215_75406_+	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|231aa|down_4|NZ_CP011509.1_75662_76355_-	cd07730, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|156aa|down_5|NZ_CP011509.1_77098_77566_-	pfam12688, TPR_5, Tetratrico peptide repeat	NA|311aa|down_6|NZ_CP011509.1_77756_78689_-	NA	NA|621aa|down_7|NZ_CP011509.1_78930_80793_+	cd18616, GH43_ABN-like, Glycosyl hydrolase family 43 such as arabinan endo-1 5-alpha-L-arabinosidase	NA|195aa|down_8|NZ_CP011509.1_81159_81744_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|332aa|down_9|NZ_CP011509.1_81836_82832_-	pfam12852, Cupin_6, Cupin
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	2	353132-353230	1	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	TTCGCACGGCTCGCGCCCGGGAGGTGCTCGGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA,NA|157aa|down_3|NZ_CP011509.1_356825_357296_-,NA|166aa|down_5|NZ_CP011509.1_358128_358626_+,NA|172aa|down_6|NZ_CP011509.1_358671_359187_-	NA|177aa|up_9|NZ_CP011509.1_340707_341238_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|463aa|up_8|NZ_CP011509.1_341264_342653_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|356aa|up_7|NZ_CP011509.1_342649_343717_-	pfam08529, NusA_N, NusA N-terminal domain	NA|318aa|up_6|NZ_CP011509.1_343794_344748_+	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme	NA|181aa|up_5|NZ_CP011509.1_344765_345308_+	pfam18138, bacHORMA_1, Bacterial HORMA domain family 1	NA|535aa|up_4|NZ_CP011509.1_345286_346891_-	pfam18178, TPALS, TIR- and PNP-associating SLOG family	NA|614aa|up_3|NZ_CP011509.1_346906_348748_-	cd01487, E1_ThiF_like, E1_ThiF_like	NA|291aa|up_2|NZ_CP011509.1_348740_349613_-	smart00572, DZF, domain in DSRM or ZnF_C2H2 domain containing proteins	NA|652aa|up_1|NZ_CP011509.1_349756_351712_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|404aa|up_0|NZ_CP011509.1_351708_352920_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|325aa|down_0|NZ_CP011509.1_353347_354322_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|423aa|down_1|NZ_CP011509.1_354373_355642_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|332aa|down_2|NZ_CP011509.1_355629_356625_-	cd01517, PAP_phosphatase, PAP-phosphatase_like domains	NA|157aa|down_3|NZ_CP011509.1_356825_357296_-	NA	NA|110aa|down_4|NZ_CP011509.1_357464_357794_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|166aa|down_5|NZ_CP011509.1_358128_358626_+	NA	NA|172aa|down_6|NZ_CP011509.1_358671_359187_-	NA	NA|163aa|down_7|NZ_CP011509.1_359216_359705_-	cd14486, 3D_domain, 3D domain, named for 3 conserved aspartate residues, is found in mltA-like lytic transglycosylases and numerous other contexts	NA|718aa|down_8|NZ_CP011509.1_359955_362109_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|136aa|down_9|NZ_CP011509.1_362149_362557_+	cd14738, PAAR_2, proline-alanine-alanine-arginine (PAAR) domain
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	3	930440-930638	2	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GCCCGGGAGGTTGCCGTTGATGTCCGGGCGGGGCGAGAACGTGGGCTTG	49	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|200aa|up_8|NZ_CP011509.1_918156_918756_-,NA|338aa|up_6|NZ_CP011509.1_919519_920533_+,NA|124aa|up_3|NZ_CP011509.1_922768_923140_-,NA|344aa|up_1|NZ_CP011509.1_927906_928938_-,NA|219aa|down_1|NZ_CP011509.1_934302_934959_+,NA|120aa|down_7|NZ_CP011509.1_943684_944044_+,NA|583aa|down_8|NZ_CP011509.1_944045_945794_-,NA|173aa|down_9|NZ_CP011509.1_945883_946402_+	NA|174aa|up_9|NZ_CP011509.1_917638_918160_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|200aa|up_8|NZ_CP011509.1_918156_918756_-	NA	NA|214aa|up_7|NZ_CP011509.1_918752_919394_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|338aa|up_6|NZ_CP011509.1_919519_920533_+	NA	NA|218aa|up_5|NZ_CP011509.1_920623_921277_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|459aa|up_4|NZ_CP011509.1_921379_922756_+	pfam03055, RPE65, Retinal pigment epithelial membrane protein	NA|124aa|up_3|NZ_CP011509.1_922768_923140_-	NA	NA|1513aa|up_2|NZ_CP011509.1_923138_927677_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|344aa|up_1|NZ_CP011509.1_927906_928938_-	NA	NA|198aa|up_0|NZ_CP011509.1_929074_929668_-	TIGR02246, hypothetical_protein, conserved hypothetical protein	NA|444aa|down_0|NZ_CP011509.1_931112_932444_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|219aa|down_1|NZ_CP011509.1_934302_934959_+	NA	NA|526aa|down_2|NZ_CP011509.1_935135_936713_+	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|423aa|down_3|NZ_CP011509.1_936698_937967_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|706aa|down_4|NZ_CP011509.1_938716_940834_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|457aa|down_5|NZ_CP011509.1_940823_942194_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|449aa|down_6|NZ_CP011509.1_942247_943594_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|120aa|down_7|NZ_CP011509.1_943684_944044_+	NA	NA|583aa|down_8|NZ_CP011509.1_944045_945794_-	NA	NA|173aa|down_9|NZ_CP011509.1_945883_946402_+	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	4	982952-983168	1	PILER-CR	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CTGCGTCAGGTCCTCGGCGGAGAGCTTGTCGTAGCCGGCGGCC	43	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|206aa|up_9|NZ_CP011509.1_967714_968332_+,NA|479aa|up_7|NZ_CP011509.1_971255_972692_-,NA|220aa|up_5|NZ_CP011509.1_974800_975460_-,NA|502aa|up_4|NZ_CP011509.1_975456_976962_-,NA|295aa|up_0|NZ_CP011509.1_981732_982617_-,NA|123aa|down_3|NZ_CP011509.1_986385_986754_+,NA|365aa|down_5|NZ_CP011509.1_988712_989807_-	NA|206aa|up_9|NZ_CP011509.1_967714_968332_+	NA	NA|898aa|up_8|NZ_CP011509.1_968352_971046_-	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|479aa|up_7|NZ_CP011509.1_971255_972692_-	NA	NA|627aa|up_6|NZ_CP011509.1_972906_974787_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|220aa|up_5|NZ_CP011509.1_974800_975460_-	NA	NA|502aa|up_4|NZ_CP011509.1_975456_976962_-	NA	NA|482aa|up_3|NZ_CP011509.1_977327_978773_+	pfam14245, Pilin_PilA, Type IV pilin PilA	NA|212aa|up_2|NZ_CP011509.1_978875_979511_-	COG5340, COG5340, Predicted transcriptional regulator [Transcription]	NA|681aa|up_1|NZ_CP011509.1_979630_981673_-	pfam00305, Lipoxygenase, Lipoxygenase	NA|295aa|up_0|NZ_CP011509.1_981732_982617_-	NA	NA|132aa|down_0|NZ_CP011509.1_984750_985146_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|116aa|down_1|NZ_CP011509.1_985272_985620_-	pfam01381, HTH_3, Helix-turn-helix	NA|164aa|down_2|NZ_CP011509.1_985671_986163_-	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|123aa|down_3|NZ_CP011509.1_986385_986754_+	NA	NA|571aa|down_4|NZ_CP011509.1_986813_988526_-	pfam00932, LTD, Lamin Tail Domain	NA|365aa|down_5|NZ_CP011509.1_988712_989807_-	NA	NA|472aa|down_6|NZ_CP011509.1_989823_991239_-	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|844aa|down_7|NZ_CP011509.1_991339_993871_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|836aa|down_8|NZ_CP011509.1_994004_996512_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|559aa|down_9|NZ_CP011509.1_996612_998289_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	5	1654626-1654744	3	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GGCGTTGGGCGTGAACGTGGCGG	23	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|100aa|up_8|NZ_CP011509.1_1645815_1646115_+,NA|134aa|up_6|NZ_CP011509.1_1648191_1648593_-,NA|125aa|up_3|NZ_CP011509.1_1651060_1651435_-,NA|166aa|up_1|NZ_CP011509.1_1652811_1653309_+,NA|98aa|down_2|NZ_CP011509.1_1658547_1658841_-,NA|447aa|down_3|NZ_CP011509.1_1660193_1661534_-,NA|751aa|down_4|NZ_CP011509.1_1661530_1663783_-,NA|203aa|down_6|NZ_CP011509.1_1665686_1666295_+,NA|175aa|down_9|NZ_CP011509.1_1667861_1668386_-	NA|176aa|up_9|NZ_CP011509.1_1644850_1645378_-	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like	NA|100aa|up_8|NZ_CP011509.1_1645815_1646115_+	NA	NA|634aa|up_7|NZ_CP011509.1_1646125_1648027_-	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|134aa|up_6|NZ_CP011509.1_1648191_1648593_-	NA	NA|228aa|up_5|NZ_CP011509.1_1648802_1649486_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|517aa|up_4|NZ_CP011509.1_1649482_1651033_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|125aa|up_3|NZ_CP011509.1_1651060_1651435_-	NA	NA|290aa|up_2|NZ_CP011509.1_1651597_1652467_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|166aa|up_1|NZ_CP011509.1_1652811_1653309_+	NA	NA|274aa|up_0|NZ_CP011509.1_1653315_1654137_-	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins	NA|456aa|down_0|NZ_CP011509.1_1655740_1657108_-	pfam00932, LTD, Lamin Tail Domain	NA|199aa|down_1|NZ_CP011509.1_1657943_1658540_+	pfam07098, DUF1360, Protein of unknown function (DUF1360)	NA|98aa|down_2|NZ_CP011509.1_1658547_1658841_-	NA	NA|447aa|down_3|NZ_CP011509.1_1660193_1661534_-	NA	NA|751aa|down_4|NZ_CP011509.1_1661530_1663783_-	NA	NA|455aa|down_5|NZ_CP011509.1_1664325_1665690_+	pfam14412, AHH, A nuclease family of the HNH/ENDO VII superfamily with conserved AHH	NA|203aa|down_6|NZ_CP011509.1_1665686_1666295_+	NA	NA|303aa|down_7|NZ_CP011509.1_1666316_1667225_-	pfam01904, DUF72, Protein of unknown function DUF72	NA|111aa|down_8|NZ_CP011509.1_1667513_1667846_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|175aa|down_9|NZ_CP011509.1_1667861_1668386_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	6	1980933-1981003	4	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GCACCTCCGTCACCATGCAGGTG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|191aa|up_6|NZ_CP011509.1_1971842_1972415_-,NA|255aa|up_5|NZ_CP011509.1_1972418_1973183_-,NA|148aa|up_2|NZ_CP011509.1_1976008_1976452_+,NA|209aa|down_3|NZ_CP011509.1_1990966_1991593_-,NA|68aa|down_4|NZ_CP011509.1_1991614_1991818_-	NA|323aa|up_9|NZ_CP011509.1_1965628_1966597_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|1013aa|up_8|NZ_CP011509.1_1966830_1969869_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|501aa|up_7|NZ_CP011509.1_1970336_1971839_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|191aa|up_6|NZ_CP011509.1_1971842_1972415_-	NA	NA|255aa|up_5|NZ_CP011509.1_1972418_1973183_-	NA	NA|215aa|up_4|NZ_CP011509.1_1973420_1974065_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|588aa|up_3|NZ_CP011509.1_1974105_1975869_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|148aa|up_2|NZ_CP011509.1_1976008_1976452_+	NA	NA|377aa|up_1|NZ_CP011509.1_1976596_1977727_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|550aa|up_0|NZ_CP011509.1_1977829_1979479_-	TIGR01194, ATP-binding_protein_SyrD, cyclic peptide transporter	NA|1076aa|down_0|NZ_CP011509.1_1983107_1986335_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|348aa|down_1|NZ_CP011509.1_1986346_1987390_-	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family	NA|1169aa|down_2|NZ_CP011509.1_1987386_1990893_-	PRK05691, PRK05691, peptide synthase; Validated	NA|209aa|down_3|NZ_CP011509.1_1990966_1991593_-	NA	NA|68aa|down_4|NZ_CP011509.1_1991614_1991818_-	NA	NA|730aa|down_5|NZ_CP011509.1_1992118_1994308_+	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|533aa|down_6|NZ_CP011509.1_1994304_1995903_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|231aa|down_7|NZ_CP011509.1_1998498_1999191_-	cd06221, sulfite_reductase_like, Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases	NA|255aa|down_8|NZ_CP011509.1_1999249_2000014_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|535aa|down_9|NZ_CP011509.1_2001863_2003468_-	PTZ00146, PTZ00146, fibrillarin; Provisional
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	7	2374011-2374109	5	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GCCATACGAAGTGCCTGACACCTTCCCGG	29	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|481aa|up_6|NZ_CP011509.1_2366600_2368043_-,NA|665aa|up_4|NZ_CP011509.1_2368842_2370837_-,NA|277aa|up_3|NZ_CP011509.1_2370941_2371772_+,NA|90aa|up_2|NZ_CP011509.1_2371743_2372013_-,NA|323aa|down_0|NZ_CP011509.1_2374366_2375335_+,NA|117aa|down_3|NZ_CP011509.1_2382264_2382615_+	NA|292aa|up_9|NZ_CP011509.1_2362269_2363145_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|431aa|up_8|NZ_CP011509.1_2363255_2364548_+	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain	NA|648aa|up_7|NZ_CP011509.1_2364570_2366514_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|481aa|up_6|NZ_CP011509.1_2366600_2368043_-	NA	NA|165aa|up_5|NZ_CP011509.1_2368250_2368745_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|665aa|up_4|NZ_CP011509.1_2368842_2370837_-	NA	NA|277aa|up_3|NZ_CP011509.1_2370941_2371772_+	NA	NA|90aa|up_2|NZ_CP011509.1_2371743_2372013_-	NA	NA|303aa|up_1|NZ_CP011509.1_2372157_2373066_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|182aa|up_0|NZ_CP011509.1_2373110_2373656_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|323aa|down_0|NZ_CP011509.1_2374366_2375335_+	NA	NA|315aa|down_1|NZ_CP011509.1_2375694_2376639_-	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain	NA|1319aa|down_2|NZ_CP011509.1_2378129_2382086_-	pfam13676, TIR_2, TIR domain	NA|117aa|down_3|NZ_CP011509.1_2382264_2382615_+	NA	NA|843aa|down_4|NZ_CP011509.1_2383016_2385545_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|238aa|down_5|NZ_CP011509.1_2385541_2386255_-	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|222aa|down_6|NZ_CP011509.1_2386347_2387013_+	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases	NA|193aa|down_7|NZ_CP011509.1_2387050_2387629_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|589aa|down_8|NZ_CP011509.1_2387798_2389565_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|557aa|down_9|NZ_CP011509.1_2389564_2391235_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	8	2651456-2651629	6	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CGCGCCCTCCAGGTTGGAGCCCT	23	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|232aa|up_6|NZ_CP011509.1_2644108_2644804_+,NA	NA|1800aa|up_9|NZ_CP011509.1_2636695_2642095_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|134aa|up_8|NZ_CP011509.1_2642228_2642630_-	TIGR04500, PpiC_rel_mature, putative peptide maturation system protein	NA|454aa|up_7|NZ_CP011509.1_2642750_2644112_+	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1	NA|232aa|up_6|NZ_CP011509.1_2644108_2644804_+	NA	NA|167aa|up_5|NZ_CP011509.1_2644810_2645311_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|269aa|up_4|NZ_CP011509.1_2645307_2646114_+	pfam14326, DUF4384, Domain of unknown function (DUF4384)	NA|527aa|up_3|NZ_CP011509.1_2646110_2647691_+	pfam00656, Peptidase_C14, Caspase domain	NA|533aa|up_2|NZ_CP011509.1_2647994_2649593_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|386aa|up_1|NZ_CP011509.1_2649721_2650879_+	sd00038, Kelch, Kelch repeat	NA|90aa|up_0|NZ_CP011509.1_2651020_2651290_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|347aa|down_0|NZ_CP011509.1_2652269_2653310_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|863aa|down_1|NZ_CP011509.1_2653299_2655888_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|958aa|down_2|NZ_CP011509.1_2656059_2658933_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|1644aa|down_3|NZ_CP011509.1_2659175_2664107_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|518aa|down_4|NZ_CP011509.1_2664125_2665679_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|472aa|down_5|NZ_CP011509.1_2665928_2667344_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|down_6|NZ_CP011509.1_2667565_2668225_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|578aa|down_7|NZ_CP011509.1_2668228_2669962_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|154aa|down_8|NZ_CP011509.1_2670221_2670683_+	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	NA|156aa|down_9|NZ_CP011509.1_2670701_2671169_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	9	2651696-2651838	7	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CGCGCCCTCCAGGTTGGAGCCCT	23	1	1	2651719-2651740	NZ_CP011509.1_2651824-2651845	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|232aa|up_6|NZ_CP011509.1_2644108_2644804_+,NA	NA|1800aa|up_9|NZ_CP011509.1_2636695_2642095_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|134aa|up_8|NZ_CP011509.1_2642228_2642630_-	TIGR04500, PpiC_rel_mature, putative peptide maturation system protein	NA|454aa|up_7|NZ_CP011509.1_2642750_2644112_+	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1	NA|232aa|up_6|NZ_CP011509.1_2644108_2644804_+	NA	NA|167aa|up_5|NZ_CP011509.1_2644810_2645311_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|269aa|up_4|NZ_CP011509.1_2645307_2646114_+	pfam14326, DUF4384, Domain of unknown function (DUF4384)	NA|527aa|up_3|NZ_CP011509.1_2646110_2647691_+	pfam00656, Peptidase_C14, Caspase domain	NA|533aa|up_2|NZ_CP011509.1_2647994_2649593_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|386aa|up_1|NZ_CP011509.1_2649721_2650879_+	sd00038, Kelch, Kelch repeat	NA|90aa|up_0|NZ_CP011509.1_2651020_2651290_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|347aa|down_0|NZ_CP011509.1_2652269_2653310_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|863aa|down_1|NZ_CP011509.1_2653299_2655888_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|958aa|down_2|NZ_CP011509.1_2656059_2658933_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|1644aa|down_3|NZ_CP011509.1_2659175_2664107_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|518aa|down_4|NZ_CP011509.1_2664125_2665679_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|472aa|down_5|NZ_CP011509.1_2665928_2667344_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|down_6|NZ_CP011509.1_2667565_2668225_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|578aa|down_7|NZ_CP011509.1_2668228_2669962_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|154aa|down_8|NZ_CP011509.1_2670221_2670683_+	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	NA|156aa|down_9|NZ_CP011509.1_2670701_2671169_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	10	2896636-2896858	8	CRISPRCasFinder	no	cas3	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Unclear	CCTCGGGCTTGGCCTCGGCCTTCAT	25	0	0	NA	NA	NA	3	3	Unclear	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|343aa|up_8|NZ_CP011509.1_2886988_2888017_-,NA|475aa|up_1|NZ_CP011509.1_2894388_2895813_+,NA|123aa|down_0|NZ_CP011509.1_2897284_2897653_+,NA|186aa|down_9|NZ_CP011509.1_2908345_2908903_-	cas3|502aa|up_9|NZ_CP011509.1_2885298_2886804_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|343aa|up_8|NZ_CP011509.1_2886988_2888017_-	NA	NA|152aa|up_7|NZ_CP011509.1_2888198_2888654_+	pfam14361, RsbRD_N, RsbT co-antagonist protein rsbRD N-terminal domain	NA|524aa|up_6|NZ_CP011509.1_2888650_2890222_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|219aa|up_5|NZ_CP011509.1_2890337_2890994_+	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional	NA|423aa|up_4|NZ_CP011509.1_2890990_2892259_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|422aa|up_3|NZ_CP011509.1_2892255_2893521_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|242aa|up_2|NZ_CP011509.1_2893559_2894285_+	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB	NA|475aa|up_1|NZ_CP011509.1_2894388_2895813_+	NA	NA|243aa|up_0|NZ_CP011509.1_2895825_2896554_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|123aa|down_0|NZ_CP011509.1_2897284_2897653_+	NA	NA|447aa|down_1|NZ_CP011509.1_2897703_2899044_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|446aa|down_2|NZ_CP011509.1_2899040_2900378_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|345aa|down_3|NZ_CP011509.1_2900498_2901533_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|279aa|down_4|NZ_CP011509.1_2901559_2902396_+	pfam13289, SIR2_2, SIR2-like domain	NA|138aa|down_5|NZ_CP011509.1_2902949_2903363_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|249aa|down_6|NZ_CP011509.1_2903391_2904138_-	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|265aa|down_7|NZ_CP011509.1_2904137_2904932_-	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA|1055aa|down_8|NZ_CP011509.1_2905160_2908325_+	pfam02450, LCAT, Lecithin:cholesterol acyltransferase	NA|186aa|down_9|NZ_CP011509.1_2908345_2908903_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	11	3564597-3564884	2	CRT	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	AAGGCGCCCGCGAAGAAG	18	1	4	3564711-3564728|3564711-3564728|3564711-3564728|3564711-3564728	NZ_CP011509.1_8299377-8299394|NZ_CP011509.1_1151067-1151084|NZ_CP011509.1_7066162-7066145|NZ_CP011509.1_9533435-9533418	NA	6	6	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|512aa|up_7|NZ_CP011509.1_3557214_3558750_-,NA|222aa|up_6|NZ_CP011509.1_3558896_3559562_-,NA|100aa|up_3|NZ_CP011509.1_3561801_3562101_+,NA|114aa|up_2|NZ_CP011509.1_3562147_3562489_-,NA|482aa|down_2|NZ_CP011509.1_3566418_3567864_+	NA|480aa|up_9|NZ_CP011509.1_3551975_3553415_+	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|1203aa|up_8|NZ_CP011509.1_3553544_3557153_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|512aa|up_7|NZ_CP011509.1_3557214_3558750_-	NA	NA|222aa|up_6|NZ_CP011509.1_3558896_3559562_-	NA	NA|356aa|up_5|NZ_CP011509.1_3559586_3560654_-	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|321aa|up_4|NZ_CP011509.1_3560664_3561627_-	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|100aa|up_3|NZ_CP011509.1_3561801_3562101_+	NA	NA|114aa|up_2|NZ_CP011509.1_3562147_3562489_-	NA	NA|103aa|up_1|NZ_CP011509.1_3562765_3563074_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|89aa|up_0|NZ_CP011509.1_3563134_3563401_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|230aa|down_0|NZ_CP011509.1_3564903_3565593_+	cd18092, SpoU-like_TrmH, SAM-dependent tRNA methylase related to TrmH	NA|249aa|down_1|NZ_CP011509.1_3565668_3566415_+	cd16325, LolA, LolA, a periplasmic chaperone	NA|482aa|down_2|NZ_CP011509.1_3566418_3567864_+	NA	NA|1119aa|down_3|NZ_CP011509.1_3567962_3571319_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|484aa|down_4|NZ_CP011509.1_3571349_3572801_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|300aa|down_5|NZ_CP011509.1_3572813_3573713_-	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|278aa|down_6|NZ_CP011509.1_3573836_3574670_+	PRK06180, PRK06180, short chain dehydrogenase; Provisional	NA|459aa|down_7|NZ_CP011509.1_3574745_3576122_-	TIGR01125, Ribosomal_protein_S12_methylthiotransferase_RimO, ribosomal protein S12 methylthiotransferase RimO	NA|375aa|down_8|NZ_CP011509.1_3576164_3577289_-	cd00241, DOMON_like, Domon-like ligand-binding domains	NA|166aa|down_9|NZ_CP011509.1_3577291_3577789_-	PRK05412, PRK05412, putative nucleotide-binding protein; Reviewed
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	12	3631923-3632034	9	CRISPRCasFinder	no	Cas9_archaeal	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	 or Type II-C?, Type II-B,Type II-A	CCGAGCGCTCTGCTCCAACTGAGCTACGG	29	0	0	NA	NA	NA	1	1	orTypeII-C?,TypeII-B,TypeII-A	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|180aa|up_6|NZ_CP011509.1_3622407_3622947_-,NA|740aa|up_5|NZ_CP011509.1_3623090_3625310_+,NA|182aa|up_1|NZ_CP011509.1_3629870_3630416_-,NA|49aa|down_0|NZ_CP011509.1_3632878_3633025_-,NA|78aa|down_5|NZ_CP011509.1_3636887_3637121_+,NA|82aa|down_7|NZ_CP011509.1_3637713_3637959_-	NA|818aa|up_9|NZ_CP011509.1_3618293_3620747_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|up_8|NZ_CP011509.1_3620697_3621438_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|286aa|up_7|NZ_CP011509.1_3621531_3622389_+	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]	NA|180aa|up_6|NZ_CP011509.1_3622407_3622947_-	NA	NA|740aa|up_5|NZ_CP011509.1_3623090_3625310_+	NA	NA|381aa|up_4|NZ_CP011509.1_3625319_3626462_-	cd01831, Endoglucanase_E_like, Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans	NA|943aa|up_3|NZ_CP011509.1_3626598_3629427_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|67aa|up_2|NZ_CP011509.1_3629521_3629722_-	PRK09469, glnA, glutamate--ammonia ligase	NA|182aa|up_1|NZ_CP011509.1_3629870_3630416_-	NA	Cas9_archaeal|181aa|up_0|NZ_CP011509.1_3630865_3631408_-	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|49aa|down_0|NZ_CP011509.1_3632878_3633025_-	NA	NA|439aa|down_1|NZ_CP011509.1_3633132_3634449_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|65aa|down_2|NZ_CP011509.1_3634565_3634760_+	pfam12559, Inhibitor_I10, Serine endopeptidase inhibitors	NA|332aa|down_3|NZ_CP011509.1_3634797_3635793_+	TIGR04185, RimK-like_ATP-grasp_domain_protein, ATP-grasp ribosomal peptide maturase, MvdC family	NA|334aa|down_4|NZ_CP011509.1_3635814_3636816_+	TIGR04184, hypothetical_protein_HMPREF0204_12500, ATP-grasp ribosomal peptide maturase, MvdD family	NA|78aa|down_5|NZ_CP011509.1_3636887_3637121_+	NA	NA|193aa|down_6|NZ_CP011509.1_3637122_3637701_-	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|82aa|down_7|NZ_CP011509.1_3637713_3637959_-	NA	NA|318aa|down_8|NZ_CP011509.1_3638057_3639011_-	pfam07920, DUF1684, Protein of unknown function (DUF1684)	NA|165aa|down_9|NZ_CP011509.1_3639096_3639591_-	PRK14900, valS, valyl-tRNA synthetase; Provisional
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	13	5181848-5181937	10	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GTGGCCGCGCTGGACATGGAGTCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|218aa|up_9|NZ_CP011509.1_5171304_5171958_-,NA|396aa|up_7|NZ_CP011509.1_5172997_5174185_-,NA|189aa|up_3|NZ_CP011509.1_5178508_5179075_+,NA|184aa|up_2|NZ_CP011509.1_5179130_5179682_+,NA|68aa|down_4|NZ_CP011509.1_5189496_5189700_-	NA|218aa|up_9|NZ_CP011509.1_5171304_5171958_-	NA	NA|324aa|up_8|NZ_CP011509.1_5172008_5172980_-	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|396aa|up_7|NZ_CP011509.1_5172997_5174185_-	NA	NA|285aa|up_6|NZ_CP011509.1_5174490_5175345_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|128aa|up_5|NZ_CP011509.1_5175475_5175859_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|833aa|up_4|NZ_CP011509.1_5175997_5178496_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|189aa|up_3|NZ_CP011509.1_5178508_5179075_+	NA	NA|184aa|up_2|NZ_CP011509.1_5179130_5179682_+	NA	NA|92aa|up_1|NZ_CP011509.1_5179691_5179967_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|393aa|up_0|NZ_CP011509.1_5180080_5181259_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|397aa|down_0|NZ_CP011509.1_5183635_5184826_+	pfam14332, DUF4388, Domain of unknown function (DUF4388)	NA|366aa|down_1|NZ_CP011509.1_5184925_5186023_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|828aa|down_2|NZ_CP011509.1_5186119_5188603_+	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only]	NA|282aa|down_3|NZ_CP011509.1_5188626_5189472_+	pfam02130, UPF0054, Uncharacterized protein family UPF0054	NA|68aa|down_4|NZ_CP011509.1_5189496_5189700_-	NA	NA|438aa|down_5|NZ_CP011509.1_5190082_5191396_+	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|212aa|down_6|NZ_CP011509.1_5192690_5193326_+	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|128aa|down_7|NZ_CP011509.1_5193322_5193706_+	pfam13490, zf-HC2, Putative zinc-finger	NA|515aa|down_8|NZ_CP011509.1_5193805_5195350_+	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|787aa|down_9|NZ_CP011509.1_5195362_5197723_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	14	5747576-5747901	11	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	ACGGGCCCGATCGATGGCGTCATGGG	26	0	0	NA	NA	NA	4	4	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|597aa|up_4|NZ_CP011509.1_5737143_5738934_+,NA|339aa|up_3|NZ_CP011509.1_5739112_5740129_+,NA|350aa|up_1|NZ_CP011509.1_5743152_5744202_-,NA|399aa|up_0|NZ_CP011509.1_5744228_5745425_-,NA	NA|255aa|up_9|NZ_CP011509.1_5730038_5730803_+	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown]	NA|579aa|up_8|NZ_CP011509.1_5730924_5732661_+	pfam08757, CotH, CotH kinase protein	NA|523aa|up_7|NZ_CP011509.1_5732747_5734316_+	PRK00029, PRK00029, YdiU family protein	NA|281aa|up_6|NZ_CP011509.1_5734352_5735195_+	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH)	NA|624aa|up_5|NZ_CP011509.1_5735227_5737099_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|597aa|up_4|NZ_CP011509.1_5737143_5738934_+	NA	NA|339aa|up_3|NZ_CP011509.1_5739112_5740129_+	NA	NA|931aa|up_2|NZ_CP011509.1_5740204_5742997_-	TIGR04534, hypothetical_protein, ELWxxDGT repeat	NA|350aa|up_1|NZ_CP011509.1_5743152_5744202_-	NA	NA|399aa|up_0|NZ_CP011509.1_5744228_5745425_-	NA	NA|202aa|down_0|NZ_CP011509.1_5748068_5748674_-	cd03049, GST_N_3, GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs	NA|206aa|down_1|NZ_CP011509.1_5748709_5749327_-	COG4300, CadD, Predicted permease, cadmium resistance protein [Inorganic ion transport and metabolism]	NA|359aa|down_2|NZ_CP011509.1_5749631_5750708_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|232aa|down_3|NZ_CP011509.1_5750861_5751557_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|268aa|down_4|NZ_CP011509.1_5751609_5752413_-	pfam13444, Acetyltransf_5, Acetyltransferase (GNAT) domain	NA|189aa|down_5|NZ_CP011509.1_5752576_5753143_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|311aa|down_6|NZ_CP011509.1_5753448_5754381_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|849aa|down_7|NZ_CP011509.1_5754670_5757217_+	pfam02494, HYR, HYR domain	NA|254aa|down_8|NZ_CP011509.1_5757456_5758218_-	pfam07452, CHRD, CHRD domain	NA|528aa|down_9|NZ_CP011509.1_5758362_5759946_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	15	5973741-5973828	12	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CCCTCCGGGAGAGGGACGGGGTGAGGGT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|171aa|up_2|NZ_CP011509.1_5971483_5971996_+,NA|154aa|down_4|NZ_CP011509.1_5984711_5985173_+,NA|121aa|down_9|NZ_CP011509.1_5990196_5990559_-	NA|284aa|up_9|NZ_CP011509.1_5962941_5963793_+	pfam01774, UreD, UreD urease accessory protein	NA|256aa|up_8|NZ_CP011509.1_5963886_5964654_+	PLN02303, PLN02303, urease	NA|572aa|up_7|NZ_CP011509.1_5964650_5966366_+	PRK13207, ureC, urease subunit alpha; Reviewed	NA|221aa|up_6|NZ_CP011509.1_5966375_5967038_+	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|246aa|up_5|NZ_CP011509.1_5967046_5967784_+	cd05540, UreG, urease accessory protein UreG	NA|267aa|up_4|NZ_CP011509.1_5967786_5968587_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|903aa|up_3|NZ_CP011509.1_5968613_5971322_-	pfam18368, Ig_GlcNase, Exo-beta-D-glucosaminidase Ig-fold domain	NA|171aa|up_2|NZ_CP011509.1_5971483_5971996_+	NA	NA|181aa|up_1|NZ_CP011509.1_5972009_5972552_-	pfam00498, FHA, FHA domain	NA|171aa|up_0|NZ_CP011509.1_5972749_5973262_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|1637aa|down_0|NZ_CP011509.1_5976304_5981215_-	cd09596, M36, Peptidase M36 family, also known as fungalysin family	NA|712aa|down_1|NZ_CP011509.1_5981394_5983530_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|96aa|down_2|NZ_CP011509.1_5983733_5984021_+	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|147aa|down_3|NZ_CP011509.1_5984021_5984462_-	pfam07366, SnoaL, SnoaL-like polyketide cyclase	NA|154aa|down_4|NZ_CP011509.1_5984711_5985173_+	NA	NA|229aa|down_5|NZ_CP011509.1_5985169_5985856_+	pfam01590, GAF, GAF domain	NA|664aa|down_6|NZ_CP011509.1_5985932_5987924_+	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|401aa|down_7|NZ_CP011509.1_5987966_5989169_-	PRK13902, alaS, alanyl-tRNA synthetase; Provisional	NA|266aa|down_8|NZ_CP011509.1_5989373_5990171_+	pfam00089, Trypsin, Trypsin	NA|121aa|down_9|NZ_CP011509.1_5990196_5990559_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	16	7802967-7803138	13	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	TCGTCCCGGGCGAAGCGGCTCCGGG	25	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|158aa|up_9|NZ_CP011509.1_7786047_7786521_-,NA|160aa|up_8|NZ_CP011509.1_7786584_7787064_-,NA|58aa|up_0|NZ_CP011509.1_7799617_7799791_-,NA	NA|158aa|up_9|NZ_CP011509.1_7786047_7786521_-	NA	NA|160aa|up_8|NZ_CP011509.1_7786584_7787064_-	NA	NA|187aa|up_7|NZ_CP011509.1_7787114_7787675_-	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase	NA|228aa|up_6|NZ_CP011509.1_7787671_7788355_-	PRK09453, PRK09453, phosphodiesterase; Provisional	NA|398aa|up_5|NZ_CP011509.1_7788351_7789545_-	pfam07075, DUF1343, Protein of unknown function (DUF1343)	NA|418aa|up_4|NZ_CP011509.1_7789559_7790813_-	cd07302, CHD, cyclase homology domain	NA|233aa|up_3|NZ_CP011509.1_7790873_7791572_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|801aa|up_2|NZ_CP011509.1_7791652_7794055_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|1766aa|up_1|NZ_CP011509.1_7794061_7799359_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|58aa|up_0|NZ_CP011509.1_7799617_7799791_-	NA	NA|471aa|down_0|NZ_CP011509.1_7803539_7804952_-	pfam09394, Inhibitor_I42, Chagasin family peptidase inhibitor I42	NA|409aa|down_1|NZ_CP011509.1_7805189_7806416_+	cd00887, MoeA, MoeA family	NA|226aa|down_2|NZ_CP011509.1_7806481_7807159_+	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA)	NA|292aa|down_3|NZ_CP011509.1_7807151_7808027_+	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|362aa|down_4|NZ_CP011509.1_7808105_7809191_-	cd16444, LipB, lipoyl/octanoyl transferase	NA|467aa|down_5|NZ_CP011509.1_7809187_7810588_-	smart00994, zf-C4_ClpX, ClpX C4-type zinc finger	NA|421aa|down_6|NZ_CP011509.1_7810674_7811937_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|312aa|down_7|NZ_CP011509.1_7811976_7812912_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|263aa|down_8|NZ_CP011509.1_7813150_7813939_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|466aa|down_9|NZ_CP011509.1_7814011_7815409_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	17	8513245-8513333	14	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CCCTCGGGAGAGGGACGGGGTGAGGGT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|126aa|up_9|NZ_CP011509.1_8502240_8502618_-,NA|164aa|up_8|NZ_CP011509.1_8502691_8503183_-,NA|160aa|up_7|NZ_CP011509.1_8503166_8503646_-,NA|123aa|up_6|NZ_CP011509.1_8503977_8504346_-,NA|489aa|up_4|NZ_CP011509.1_8506285_8507752_+,NA|220aa|down_9|NZ_CP011509.1_8525765_8526425_-	NA|126aa|up_9|NZ_CP011509.1_8502240_8502618_-	NA	NA|164aa|up_8|NZ_CP011509.1_8502691_8503183_-	NA	NA|160aa|up_7|NZ_CP011509.1_8503166_8503646_-	NA	NA|123aa|up_6|NZ_CP011509.1_8503977_8504346_-	NA	NA|551aa|up_5|NZ_CP011509.1_8504521_8506174_-	PRK05858, PRK05858, acetolactate synthase	NA|489aa|up_4|NZ_CP011509.1_8506285_8507752_+	NA	NA|237aa|up_3|NZ_CP011509.1_8507874_8508585_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|275aa|up_2|NZ_CP011509.1_8508672_8509497_+	pfam03803, Scramblase, Scramblase	NA|112aa|up_1|NZ_CP011509.1_8509504_8509840_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|928aa|up_0|NZ_CP011509.1_8510424_8513208_+	PRK06556, PRK06556, vitamin B12-dependent ribonucleotide reductase; Validated	NA|1121aa|down_0|NZ_CP011509.1_8513653_8517016_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|465aa|down_1|NZ_CP011509.1_8517111_8518506_-	TIGR03023, Sugar_transferase	NA|380aa|down_2|NZ_CP011509.1_8518728_8519868_-	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins	NA|351aa|down_3|NZ_CP011509.1_8519987_8521040_+	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|370aa|down_4|NZ_CP011509.1_8521116_8522226_+	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|365aa|down_5|NZ_CP011509.1_8522325_8523420_-	PRK07883, PRK07883, DEDD exonuclease domain-containing protein	NA|119aa|down_6|NZ_CP011509.1_8523544_8523901_-	cd17550, REC_NtrX-like, phosphoacceptor receiver (REC) domain of nitrogen assimilation regulatory protein NtrX and similar proteins	NA|118aa|down_7|NZ_CP011509.1_8523981_8524335_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|400aa|down_8|NZ_CP011509.1_8524459_8525659_-	sd00006, TPR, Tetratricopeptide repeat	NA|220aa|down_9|NZ_CP011509.1_8525765_8526425_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	18	8536789-8536914	15	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CCGGAGCGGCCGGCTTGGGCTGCGGCGCGGGCG	33	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|220aa|up_5|NZ_CP011509.1_8525765_8526425_-,NA|126aa|down_5|NZ_CP011509.1_8544391_8544769_-,NA|88aa|down_7|NZ_CP011509.1_8548151_8548415_+,NA|118aa|down_9|NZ_CP011509.1_8549186_8549540_-	NA|365aa|up_9|NZ_CP011509.1_8522325_8523420_-	PRK07883, PRK07883, DEDD exonuclease domain-containing protein	NA|119aa|up_8|NZ_CP011509.1_8523544_8523901_-	cd17550, REC_NtrX-like, phosphoacceptor receiver (REC) domain of nitrogen assimilation regulatory protein NtrX and similar proteins	NA|118aa|up_7|NZ_CP011509.1_8523981_8524335_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|400aa|up_6|NZ_CP011509.1_8524459_8525659_-	sd00006, TPR, Tetratricopeptide repeat	NA|220aa|up_5|NZ_CP011509.1_8525765_8526425_-	NA	NA|654aa|up_4|NZ_CP011509.1_8527379_8529341_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|408aa|up_3|NZ_CP011509.1_8529413_8530637_-	pfam04932, Wzy_C, O-Antigen ligase	NA|367aa|up_2|NZ_CP011509.1_8530633_8531734_-	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|371aa|up_1|NZ_CP011509.1_8531730_8532843_-	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|422aa|up_0|NZ_CP011509.1_8532852_8534118_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|515aa|down_0|NZ_CP011509.1_8537518_8539063_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|165aa|down_1|NZ_CP011509.1_8539171_8539666_-	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]	NA|175aa|down_2|NZ_CP011509.1_8539714_8540239_-	pfam13411, MerR_1, MerR HTH family regulatory protein	NA|628aa|down_3|NZ_CP011509.1_8540403_8542287_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|624aa|down_4|NZ_CP011509.1_8542375_8544247_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|126aa|down_5|NZ_CP011509.1_8544391_8544769_-	NA	NA|984aa|down_6|NZ_CP011509.1_8544933_8547885_-	pfam09343, DUF2460, Conserved hypothetical protein 2217 (DUF2460)	NA|88aa|down_7|NZ_CP011509.1_8548151_8548415_+	NA	NA|214aa|down_8|NZ_CP011509.1_8548535_8549177_+	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|118aa|down_9|NZ_CP011509.1_8549186_8549540_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	19	9575089-9575207	16	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CTACACGGTCGATCAGATCGGCTCGACCTTGA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|198aa|up_8|NZ_CP011509.1_9554102_9554696_-,NA|140aa|up_6|NZ_CP011509.1_9556573_9556993_-,NA|289aa|up_4|NZ_CP011509.1_9559270_9560137_-,NA|198aa|down_1|NZ_CP011509.1_9579287_9579881_+,NA|261aa|down_2|NZ_CP011509.1_9580014_9580797_+,NA|252aa|down_3|NZ_CP011509.1_9581225_9581981_+,NA|249aa|down_4|NZ_CP011509.1_9582068_9582815_-,NA|391aa|down_6|NZ_CP011509.1_9585390_9586563_+	NA|362aa|up_9|NZ_CP011509.1_9552963_9554049_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|198aa|up_8|NZ_CP011509.1_9554102_9554696_-	NA	NA|226aa|up_7|NZ_CP011509.1_9555867_9556545_+	TIGR02227, Inactive_signal_peptidase_IA	NA|140aa|up_6|NZ_CP011509.1_9556573_9556993_-	NA	NA|668aa|up_5|NZ_CP011509.1_9557262_9559266_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|289aa|up_4|NZ_CP011509.1_9559270_9560137_-	NA	NA|215aa|up_3|NZ_CP011509.1_9560184_9560829_-	pfam14245, Pilin_PilA, Type IV pilin PilA	NA|850aa|up_2|NZ_CP011509.1_9561024_9563574_+	pfam01734, Patatin, Patatin-like phospholipase	NA|578aa|up_1|NZ_CP011509.1_9563644_9565378_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|650aa|up_0|NZ_CP011509.1_9565503_9567453_+	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|1067aa|down_0|NZ_CP011509.1_9575630_9578831_-	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional	NA|198aa|down_1|NZ_CP011509.1_9579287_9579881_+	NA	NA|261aa|down_2|NZ_CP011509.1_9580014_9580797_+	NA	NA|252aa|down_3|NZ_CP011509.1_9581225_9581981_+	NA	NA|249aa|down_4|NZ_CP011509.1_9582068_9582815_-	NA	NA|665aa|down_5|NZ_CP011509.1_9583141_9585136_+	pfam01347, Vitellogenin_N, Lipoprotein amino terminal region	NA|391aa|down_6|NZ_CP011509.1_9585390_9586563_+	NA	NA|369aa|down_7|NZ_CP011509.1_9586863_9587970_+	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e	NA|265aa|down_8|NZ_CP011509.1_9588058_9588853_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|512aa|down_9|NZ_CP011509.1_9589018_9590554_+	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	20	10539629-10539713	17	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CGCGGTGGCCGCCGGTCCCGAGACGCCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|98aa|up_2|NZ_CP011509.1_10535411_10535705_+,NA|200aa|up_1|NZ_CP011509.1_10535724_10536324_+,NA	NA|653aa|up_9|NZ_CP011509.1_10526777_10528736_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|204aa|up_8|NZ_CP011509.1_10528690_10529302_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|481aa|up_7|NZ_CP011509.1_10529271_10530714_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|650aa|up_6|NZ_CP011509.1_10530956_10532906_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|93aa|up_5|NZ_CP011509.1_10532932_10533211_+	pfam04341, DUF485, Protein of unknown function, DUF485	NA|542aa|up_4|NZ_CP011509.1_10533227_10534853_+	PRK09395, actP, cation/acetate symporter ActP	NA|132aa|up_3|NZ_CP011509.1_10534865_10535261_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|98aa|up_2|NZ_CP011509.1_10535411_10535705_+	NA	NA|200aa|up_1|NZ_CP011509.1_10535724_10536324_+	NA	NA|397aa|up_0|NZ_CP011509.1_10536325_10537516_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|1270aa|down_0|NZ_CP011509.1_10539779_10543589_-	pfam17936, Big_6, Bacterial Ig domain	NA|1382aa|down_1|NZ_CP011509.1_10544185_10548331_-	pfam12810, Gly_rich, Glycine rich protein	NA|610aa|down_2|NZ_CP011509.1_10548452_10550282_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|197aa|down_3|NZ_CP011509.1_10550667_10551258_+	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	NA|456aa|down_4|NZ_CP011509.1_10551254_10552622_+	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family	NA|231aa|down_5|NZ_CP011509.1_10552637_10553330_+	pfam09850, DotU, Type VI secretion system protein DotU	NA|1209aa|down_6|NZ_CP011509.1_10553326_10556953_+	TIGR03348, VI_IcmF, type VI secretion protein IcmF	NA|310aa|down_7|NZ_CP011509.1_10556955_10557885_+	TIGR03373, VI_minor_4, type VI secretion-associated protein, BMA_A0400 family	NA|561aa|down_8|NZ_CP011509.1_10557898_10559581_+	TIGR03362, VI_chp_7, type VI secretion-associated protein, VC_A0119 family	NA|167aa|down_9|NZ_CP011509.1_10559664_10560165_+	pfam05591, T6SS_VipA, Type VI secretion system, VipA, VC_A0107 or Hcp2
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	21	10558488-10558627	18	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CCGCCGCGCCTCCGCCCGCGCCC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA,NA|334aa|down_7|NZ_CP011509.1_10568233_10569235_+,NA|228aa|down_8|NZ_CP011509.1_10569250_10569934_-,NA|288aa|down_9|NZ_CP011509.1_10569972_10570836_-	NA|397aa|up_9|NZ_CP011509.1_10536325_10537516_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|677aa|up_8|NZ_CP011509.1_10537697_10539728_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|1270aa|up_7|NZ_CP011509.1_10539779_10543589_-	pfam17936, Big_6, Bacterial Ig domain	NA|1382aa|up_6|NZ_CP011509.1_10544185_10548331_-	pfam12810, Gly_rich, Glycine rich protein	NA|610aa|up_5|NZ_CP011509.1_10548452_10550282_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|197aa|up_4|NZ_CP011509.1_10550667_10551258_+	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	NA|456aa|up_3|NZ_CP011509.1_10551254_10552622_+	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family	NA|231aa|up_2|NZ_CP011509.1_10552637_10553330_+	pfam09850, DotU, Type VI secretion system protein DotU	NA|1209aa|up_1|NZ_CP011509.1_10553326_10556953_+	TIGR03348, VI_IcmF, type VI secretion protein IcmF	NA|310aa|up_0|NZ_CP011509.1_10556955_10557885_+	TIGR03373, VI_minor_4, type VI secretion-associated protein, BMA_A0400 family	NA|167aa|down_0|NZ_CP011509.1_10559664_10560165_+	pfam05591, T6SS_VipA, Type VI secretion system, VipA, VC_A0107 or Hcp2	NA|495aa|down_1|NZ_CP011509.1_10560186_10561671_+	TIGR03355, VI_chp_2, type VI secretion protein, EvpB/VC_A0108 family	NA|164aa|down_2|NZ_CP011509.1_10561785_10562277_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|133aa|down_3|NZ_CP011509.1_10562339_10562738_+	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein	NA|584aa|down_4|NZ_CP011509.1_10562748_10564500_+	TIGR03359, VI_chp_6, type VI secretion protein, VC_A0110 family	NA|347aa|down_5|NZ_CP011509.1_10564463_10565504_+	pfam06996, T6SS_TssG, Type VI secretion, TssG	NA|884aa|down_6|NZ_CP011509.1_10565573_10568225_+	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|334aa|down_7|NZ_CP011509.1_10568233_10569235_+	NA	NA|228aa|down_8|NZ_CP011509.1_10569250_10569934_-	NA	NA|288aa|down_9|NZ_CP011509.1_10569972_10570836_-	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	22	10904564-10904718	19	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	CCCCTCGCCCTCCGGGAGAGGGACGGGGTGAGGGT	35	0	0	NA	NA	NA	2	2	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|414aa|up_5|NZ_CP011509.1_10898308_10899550_+,NA|267aa|down_7|NZ_CP011509.1_10911346_10912147_-	NA|295aa|up_9|NZ_CP011509.1_10891711_10892596_-	cd01144, BtuF, Cobalamin binding protein BtuF	NA|346aa|up_8|NZ_CP011509.1_10892713_10893751_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|557aa|up_7|NZ_CP011509.1_10894078_10895749_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|852aa|up_6|NZ_CP011509.1_10895756_10898312_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|414aa|up_5|NZ_CP011509.1_10898308_10899550_+	NA	NA|158aa|up_4|NZ_CP011509.1_10899839_10900313_+	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|210aa|up_3|NZ_CP011509.1_10900335_10900965_-	PRK05419, PRK05419, protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA|329aa|up_2|NZ_CP011509.1_10900970_10901957_-	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA|246aa|up_1|NZ_CP011509.1_10901990_10902728_-	cd03513, CrtW_beta-carotene-ketolase, Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene	NA|571aa|up_0|NZ_CP011509.1_10902802_10904515_-	PLN02791, PLN02791, Nudix hydrolase homolog	NA|192aa|down_0|NZ_CP011509.1_10904725_10905301_-	pfam02517, Abi, CAAX protease self-immunity	NA|417aa|down_1|NZ_CP011509.1_10905383_10906634_-	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|339aa|down_2|NZ_CP011509.1_10906812_10907829_+	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|263aa|down_3|NZ_CP011509.1_10907825_10908614_+	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|212aa|down_4|NZ_CP011509.1_10908610_10909246_+	PRK01222, PRK01222, phosphoribosylanthranilate isomerase	NA|402aa|down_5|NZ_CP011509.1_10909254_10910460_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|264aa|down_6|NZ_CP011509.1_10910456_10911248_+	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|267aa|down_7|NZ_CP011509.1_10911346_10912147_-	NA	NA|675aa|down_8|NZ_CP011509.1_10912551_10914576_+	cd03398, PAP2_haloperoxidase, PAP2, haloperoxidase_like subfamily	NA|199aa|down_9|NZ_CP011509.1_10914650_10915247_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	23	11237133-11237226	20	CRISPRCasFinder	no	RT	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Unclear	CCCTCCGGGAGAGGGTCGGGGTGAGGGT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA,NA|141aa|down_1|NZ_CP011509.1_11239436_11239859_+,NA|188aa|down_6|NZ_CP011509.1_11245326_11245890_-,NA|77aa|down_9|NZ_CP011509.1_11248613_11248844_+	NA|264aa|up_9|NZ_CP011509.1_11215986_11216778_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|533aa|up_8|NZ_CP011509.1_11216875_11218474_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|567aa|up_7|NZ_CP011509.1_11218653_11220354_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|420aa|up_6|NZ_CP011509.1_11220357_11221617_-	cd04501, SGNH_hydrolase_like_4, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|891aa|up_5|NZ_CP011509.1_11221680_11224353_-	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins	NA|534aa|up_4|NZ_CP011509.1_11224532_11226134_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|397aa|up_3|NZ_CP011509.1_11226240_11227431_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|511aa|up_2|NZ_CP011509.1_11227510_11229043_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|441aa|up_1|NZ_CP011509.1_11229299_11230622_+	TIGR03097, PEP_O_lig_1, probable O-glycosylation ligase, exosortase A-associated	NA|472aa|up_0|NZ_CP011509.1_11230668_11232084_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|317aa|down_0|NZ_CP011509.1_11237750_11238701_-	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]	NA|141aa|down_1|NZ_CP011509.1_11239436_11239859_+	NA	NA|887aa|down_2|NZ_CP011509.1_11239883_11242544_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|283aa|down_3|NZ_CP011509.1_11242704_11243553_-	cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis	NA|355aa|down_4|NZ_CP011509.1_11243549_11244614_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|165aa|down_5|NZ_CP011509.1_11244825_11245320_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|188aa|down_6|NZ_CP011509.1_11245326_11245890_-	NA	NA|377aa|down_7|NZ_CP011509.1_11246000_11247131_-	cd19093, AKR_AtPLR-like, Arabidopsis thaliana pyridoxal reductase (PLR) and similar proteins	NA|441aa|down_8|NZ_CP011509.1_11247141_11248464_+	pfam07396, Porin_O_P, Phosphate-selective porin O and P	NA|77aa|down_9|NZ_CP011509.1_11248613_11248844_+	NA
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	24	11684174-11684268	21	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GGCTTCTTGCGGCCAATGGACTT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA,NA|333aa|down_5|NZ_CP011509.1_11695857_11696856_+,NA|205aa|down_6|NZ_CP011509.1_11696855_11697470_+	NA|618aa|up_9|NZ_CP011509.1_11670613_11672467_-	cd10276, BamB_YfgL, Beta-barrel assembly machinery (Bam) complex component B and related proteins	NA|334aa|up_8|NZ_CP011509.1_11672881_11673883_+	PLN02983, PLN02983, biotin carboxyl carrier protein of acetyl-CoA carboxylase	NA|252aa|up_7|NZ_CP011509.1_11673932_11674688_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|294aa|up_6|NZ_CP011509.1_11674684_11675566_-	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|355aa|up_5|NZ_CP011509.1_11675535_11676600_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|310aa|up_4|NZ_CP011509.1_11676608_11677538_-	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|402aa|up_3|NZ_CP011509.1_11677537_11678743_-	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|502aa|up_2|NZ_CP011509.1_11679697_11681203_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|611aa|up_1|NZ_CP011509.1_11681260_11683093_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|317aa|up_0|NZ_CP011509.1_11683099_11684050_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|238aa|down_0|NZ_CP011509.1_11684805_11685519_+	pfam14771, DUF4476, Domain of unknown function (DUF4476)	NA|796aa|down_1|NZ_CP011509.1_11685621_11688009_+	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like	NA|290aa|down_2|NZ_CP011509.1_11688140_11689010_+	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|283aa|down_3|NZ_CP011509.1_11689082_11689931_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|1853aa|down_4|NZ_CP011509.1_11690292_11695851_+	pfam12770, CHAT, CHAT domain	NA|333aa|down_5|NZ_CP011509.1_11695857_11696856_+	NA	NA|205aa|down_6|NZ_CP011509.1_11696855_11697470_+	NA	NA|560aa|down_7|NZ_CP011509.1_11697505_11699185_-	PRK06184, PRK06184, hypothetical protein; Provisional	NA|359aa|down_8|NZ_CP011509.1_11699261_11700338_-	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides	NA|251aa|down_9|NZ_CP011509.1_11700355_11701108_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein
GCF_001027285.1_ASM102728v1	NZ_CP011509	Archangium gephyra strain DSM 2261 chromosome, complete genome	25	11798522-11798611	22	CRISPRCasFinder	no		csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	Orphan	GCGGCCAATGCGCGTCCGCTCCTC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,WYL,RT,2OG_CAS,cas3,Cas9_archaeal,DinG	NA|444aa|up_9|NZ_CP011509.1_11788919_11790251_-,NA|78aa|up_8|NZ_CP011509.1_11790495_11790729_-,NA|181aa|up_7|NZ_CP011509.1_11791117_11791660_+,NA|154aa|up_6|NZ_CP011509.1_11791666_11792128_-,NA|112aa|up_3|NZ_CP011509.1_11794978_11795314_+,NA|210aa|up_2|NZ_CP011509.1_11795325_11795955_+,NA|150aa|down_0|NZ_CP011509.1_11798811_11799261_-,NA|242aa|down_2|NZ_CP011509.1_11800229_11800955_-,NA|136aa|down_9|NZ_CP011509.1_11809217_11809625_+	NA|444aa|up_9|NZ_CP011509.1_11788919_11790251_-	NA	NA|78aa|up_8|NZ_CP011509.1_11790495_11790729_-	NA	NA|181aa|up_7|NZ_CP011509.1_11791117_11791660_+	NA	NA|154aa|up_6|NZ_CP011509.1_11791666_11792128_-	NA	NA|215aa|up_5|NZ_CP011509.1_11792124_11792769_-	pfam13490, zf-HC2, Putative zinc-finger	NA|206aa|up_4|NZ_CP011509.1_11792838_11793456_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|112aa|up_3|NZ_CP011509.1_11794978_11795314_+	NA	NA|210aa|up_2|NZ_CP011509.1_11795325_11795955_+	NA	NA|244aa|up_1|NZ_CP011509.1_11795962_11796694_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|111aa|up_0|NZ_CP011509.1_11796706_11797039_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|150aa|down_0|NZ_CP011509.1_11798811_11799261_-	NA	NA|301aa|down_1|NZ_CP011509.1_11799330_11800233_-	pfam01218, Coprogen_oxidas, Coproporphyrinogen III oxidase	NA|242aa|down_2|NZ_CP011509.1_11800229_11800955_-	NA	NA|319aa|down_3|NZ_CP011509.1_11801214_11802171_+	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like	NA|275aa|down_4|NZ_CP011509.1_11802339_11803164_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|457aa|down_5|NZ_CP011509.1_11803166_11804537_-	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain	NA|233aa|down_6|NZ_CP011509.1_11804738_11805437_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|851aa|down_7|NZ_CP011509.1_11805433_11807986_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|394aa|down_8|NZ_CP011509.1_11807990_11809172_+	COG5621, COG5621, Predicted secreted hydrolase [General function prediction only]	NA|136aa|down_9|NZ_CP011509.1_11809217_11809625_+	NA
