The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011501	Pandoraea apista strain AU2161, complete genome	5574863	2549614	2563190	5574863		Burkholderia_virus(33.33%)	21	NA	NA
WP_042118265.1|2549614_2549827_-	helix-turn-helix domain-containing protein	NA	Q6J1Q0	Burkholderia_virus	51.9	7.1e-07
WP_042115612.1|2549837_2550089_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_045852665.1|2550173_2552405_-	DNA methyltransferase	NA	H9C171	Pectobacterium_phage	39.0	7.6e-115
WP_042115613.1|2552513_2553011_-	single-stranded DNA-binding protein	NA	I6NRL7	Burkholderia_virus	78.1	9.1e-45
WP_042115614.1|2553039_2553273_-	hypothetical protein	NA	W8JKF6	Salmonella_phage	38.2	1.0e-06
WP_156181612.1|2553269_2553446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115615.1|2553450_2553816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115616.1|2553820_2554132_-	hypothetical protein	NA	A0A0H5AW99	Pseudomonas_phage	55.1	9.8e-13
WP_042115617.1|2554124_2554430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115618.1|2554444_2554978_-	hypothetical protein	NA	H2BDI1	Pseudomonas_virus	36.7	6.8e-22
WP_047827188.1|2554922_2555297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042118269.1|2555293_2556268_-	phage Gp37/Gp68 family protein	NA	Q8W6R4	Burkholderia_virus	62.5	9.3e-118
WP_042115620.1|2556260_2556644_-	ASCH domain-containing protein	NA	A0A291AUQ6	Sinorhizobium_phage	50.4	2.2e-30
WP_052765575.1|2556646_2557426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115621.1|2557430_2557640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115622.1|2557643_2557901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115623.1|2557951_2558782_-	DUF2303 family protein	NA	A0A291AUR3	Sinorhizobium_phage	27.9	6.7e-16
WP_052765576.1|2558815_2559172_-	hypothetical protein	NA	I6NMK2	Burkholderia_virus	34.7	3.2e-07
WP_082118026.1|2559208_2559889_-	DUF550 domain-containing protein	NA	L7TI87	Pseudomonas_virus	51.9	1.5e-34
WP_042115624.1|2560503_2560845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115625.1|2561540_2563190_-	hypothetical protein	NA	U6C712	Ralstonia_phage	62.4	1.9e-139
>prophage 2
NZ_CP011501	Pandoraea apista strain AU2161, complete genome	5574863	2566494	2579450	5574863	terminase	Burkholderia_phage(23.08%)	22	NA	NA
WP_042115628.1|2566494_2566758_-	hypothetical protein	NA	Q6UYL7	Burkholderia_phage	70.8	1.0e-26
WP_156181613.1|2566762_2567050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115630.1|2567373_2567670_-	KTSC domain-containing protein	NA	A9YWW2	Burkholderia_phage	44.7	3.3e-10
WP_042115631.1|2568328_2568550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042115632.1|2568554_2568986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052765578.1|2569029_2569488_-	hypothetical protein	NA	A0A2D1GNH0	Pseudomonas_phage	48.6	5.7e-09
WP_042115633.1|2569567_2569846_+	helix-turn-helix domain-containing protein	NA	D0UIL8	Aggregatibacter_phage	56.8	3.5e-14
WP_042115634.1|2569926_2570385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052765579.1|2570387_2570780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042115635.1|2570776_2571283_+	hypothetical protein	NA	A0A142KAC0	Gordonia_phage	56.8	1.2e-39
WP_109468934.1|2571269_2572532_+	site-specific DNA-methyltransferase	NA	Q8W6P4	Burkholderia_virus	44.1	7.9e-85
WP_052765580.1|2572524_2573445_+	hypothetical protein	NA	A0A0D4DBT2	Acinetobacter_phage	64.2	2.4e-51
WP_052765581.1|2573425_2574229_+	hypothetical protein	NA	K7PLU3	Enterobacteria_phage	34.4	2.9e-40
WP_156181614.1|2574225_2574375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042115637.1|2574367_2574565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042115638.1|2574567_2575041_+	DUF1367 family protein	NA	A0A0M3LR84	Mannheimia_phage	32.7	5.8e-17
WP_042115639.1|2575040_2575343_+	hypothetical protein	NA	I6XGC2	Burkholderia_virus	50.0	1.6e-15
WP_042115640.1|2575333_2575564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042118287.1|2575707_2576010_+	phage related protein gp8	NA	Q3HQZ9	Burkholderia_phage	55.2	3.5e-23
WP_082117861.1|2575988_2576639_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_052765582.1|2576662_2577868_+|terminase	terminase small subunit	terminase	I6NV32	Burkholderia_virus	44.4	8.7e-41
WP_042115642.1|2577875_2579450_+	DEAD/DEAH box helicase family protein	NA	A0A1L6BXZ8	Clostridium_phage	23.4	8.2e-23
>prophage 3
NZ_CP011501	Pandoraea apista strain AU2161, complete genome	5574863	3272194	3351957	5574863	integrase,plate,transposase,head,terminase,coat,tail	Pseudomonas_phage(28.57%)	72	3283025:3283039	3316767:3316781
WP_042116097.1|3272194_3273241_-|plate	phage baseplate assembly protein	plate	A0A2I7S9E5	Vibrio_phage	27.5	1.9e-07
WP_042116098.1|3273237_3273645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052765631.1|3273646_3274225_-|plate	phage baseplate assembly protein V	plate	A0A192Y8K5	Salmonella_phage	36.3	8.2e-13
WP_042116100.1|3274221_3275277_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_042116101.1|3275269_3276505_-	phage FluMu DNA circulation protein	NA	NA	NA	NA	NA
WP_042116103.1|3276504_3278640_-|tail	phage tail length tape measure protein	tail	A0A0M3LPB6	Mannheimia_phage	37.2	2.9e-63
WP_042116106.1|3278871_3279195_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_042116107.1|3279209_3279572_-|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_042116109.1|3279622_3281095_-|tail	phage tail sheath protein	tail	A0A2P9JZJ8	Alteromonadaceae_phage	32.4	1.2e-57
WP_042116111.1|3281091_3281571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042116112.1|3281567_3282062_-	DUF1320 domain-containing protein	NA	NA	NA	NA	NA
WP_053058638.1|3282061_3282538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042116113.1|3282623_3283526_-|head	phage head protein	head	H6V827	Pseudomonas_virus	42.2	2.4e-59
3283025:3283039	attL	CCCACGGCGCGCCAG	NA	NA	NA	NA
WP_042116115.1|3283579_3284572_-	hypothetical protein	NA	A0A2D1GNS3	Pseudomonas_phage	32.8	7.2e-33
WP_042118577.1|3284802_3285240_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_042116118.1|3285267_3285723_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_042116120.1|3285725_3286427_-	DUF2786 domain-containing protein	NA	A0A2H4JCP9	uncultured_Caudovirales_phage	40.4	4.0e-30
WP_042116121.1|3286513_3286789_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_042116123.1|3286856_3287258_-	ASCH domain-containing protein	NA	B5TA86	Burkholderia_phage	76.9	1.1e-53
WP_042116125.1|3287266_3287893_-	DUF3164 family protein	NA	B5TA85	Burkholderia_phage	89.4	4.7e-99
WP_042116126.1|3287892_3288474_-	hypothetical protein	NA	B5TA84	Burkholderia_phage	72.0	2.7e-64
WP_109468904.1|3288744_3288942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042116128.1|3288956_3289907_-	AAA family ATPase	NA	B5TA81	Burkholderia_phage	41.6	1.2e-61
WP_042116130.1|3289920_3291600_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	B5TA80	Burkholderia_phage	36.6	2.8e-90
WP_042116132.1|3291602_3292772_-	hypothetical protein	NA	J9RW58	Pseudomonas_phage	67.3	6.4e-49
WP_042116134.1|3292780_3292960_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_150728747.1|3293018_3293393_+	helix-turn-helix domain-containing protein	NA	A4JWR8	Burkholderia_virus	46.2	1.9e-10
WP_047827190.1|3293458_3293869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116139.1|3293953_3294307_+	membrane protein	NA	Q6QIC8	Burkholderia_phage	63.1	4.2e-28
WP_052765635.1|3294309_3294960_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	43.8	1.5e-34
WP_052765636.1|3294956_3295454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116140.1|3295450_3295828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116142.1|3295831_3296332_+	DUF1804 family protein	NA	F6MIK6	Haemophilus_phage	36.5	2.4e-08
WP_042116144.1|3296318_3297992_+|terminase	phage terminase large subunit	terminase	A0A125RNB9	Pseudomonas_phage	53.3	1.4e-158
WP_042116145.1|3297984_3299538_+	DUF935 family protein	NA	J9SVY0	Pseudomonas_phage	39.5	2.1e-87
WP_042116147.1|3299534_3299780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116149.1|3299776_3301057_+	hypothetical protein	NA	J9STS2	Pseudomonas_phage	40.7	8.0e-77
WP_042116150.1|3301142_3301727_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_042116152.1|3304352_3305129_-	P-loop NTPase	NA	NA	NA	NA	NA
WP_052765637.1|3305206_3309100_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_109468940.1|3309072_3310257_-	cellulase	NA	NA	NA	NA	NA
WP_052765639.1|3310299_3312663_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA	NA
WP_124988600.1|3312951_3313218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116154.1|3313224_3313878_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_052765640.1|3313900_3315877_+	FUSC family protein	NA	NA	NA	NA	NA
WP_042116158.1|3316097_3317261_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
3316767:3316781	attR	CTGGCGCGCCGTGGG	NA	NA	NA	NA
WP_082117919.1|3317391_3318681_-	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
WP_042116160.1|3318994_3319732_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_042116161.1|3319784_3319976_-	DUF2964 family protein	NA	NA	NA	NA	NA
WP_042116162.1|3320146_3320356_-	DUF2964 domain-containing protein	NA	NA	NA	NA	NA
WP_042118598.1|3320529_3320832_-	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
WP_042116164.1|3321034_3321601_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_109468905.1|3321671_3323033_-	N-succinylarginine dihydrolase	NA	NA	NA	NA	NA
WP_042118603.1|3323079_3324561_-	succinylglutamate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_052765641.1|3324771_3325836_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_042116166.1|3326208_3327987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042116168.1|3329807_3331082_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_042116169.1|3331182_3332502_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_042116170.1|3332615_3333521_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_082117920.1|3333546_3336927_-	response regulator	NA	A0A1V0SGX0	Hokovirus	34.4	3.7e-28
WP_039365914.1|3336956_3337631_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_156181634.1|3337849_3338419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042118611.1|3338827_3339649_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_052765642.1|3339937_3341227_-	CoA transferase	NA	NA	NA	NA	NA
WP_042116173.1|3341482_3342460_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA	NA
WP_042116174.1|3342534_3345240_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042116175.1|3345382_3345868_-	DNA starvation/stationary phase protection protein Dps	NA	NA	NA	NA	NA
WP_042116177.1|3345988_3346561_-	HdeD family acid-resistance protein	NA	NA	NA	NA	NA
WP_082117921.1|3347124_3347658_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_042116180.1|3347673_3348432_+	molecular chaperone	NA	NA	NA	NA	NA
WP_156181636.1|3348274_3350983_+	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA	NA
WP_042116183.1|3350979_3351957_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
