assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001022195.1_ASM102219v1	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	1	68011-68246	1,1	PILER-CR,CRT	no	PD-DExK	PD-DExK	Unclear	CATTGGTCGAAAAGCATTTGCATGAATGGG,AAAAGCANTTGCATGAATG	30,19	0	0	NA	NA	NA:NA	2,5	5	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA|59aa|up_8|NZ_CP011635.1_56866_57043_-,NA|274aa|up_4|NZ_CP011635.1_61352_62174_-,NA|67aa|up_2|NZ_CP011635.1_63156_63357_-,NA|292aa|up_0|NZ_CP011635.1_66144_67020_+,NA|118aa|down_0|NZ_CP011635.1_68545_68899_+,NA|147aa|down_4|NZ_CP011635.1_71307_71748_+,NA|169aa|down_6|NZ_CP011635.1_73104_73611_+	NA|796aa|up_9|NZ_CP011635.1_54233_56621_-	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3)	NA|59aa|up_8|NZ_CP011635.1_56866_57043_-	NA	NA|559aa|up_7|NZ_CP011635.1_57057_58734_-	pfam13708, DUF4942, Domain of unknown function (DUF4942)	NA|385aa|up_6|NZ_CP011635.1_58999_60154_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|282aa|up_5|NZ_CP011635.1_60492_61338_+	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|274aa|up_4|NZ_CP011635.1_61352_62174_-	NA	NA|240aa|up_3|NZ_CP011635.1_62440_63160_-	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40	NA|67aa|up_2|NZ_CP011635.1_63156_63357_-	NA	NA|344aa|up_1|NZ_CP011635.1_64098_65130_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|292aa|up_0|NZ_CP011635.1_66144_67020_+	NA	NA|118aa|down_0|NZ_CP011635.1_68545_68899_+	NA	NA|117aa|down_1|NZ_CP011635.1_68917_69268_+	pfam07178, TraL, TraL protein	NA|262aa|down_2|NZ_CP011635.1_69279_70065_+	pfam05309, TraE, TraE protein	NA|413aa|down_3|NZ_CP011635.1_70067_71306_+	pfam06586, TraK, TraK protein	NA|147aa|down_4|NZ_CP011635.1_71307_71748_+	NA	NA|453aa|down_5|NZ_CP011635.1_71737_73096_+	cd16430, TraB, TraB is a homolog of VirB10 which forms part of core complex in Type IV secretion system (T4SS)	NA|169aa|down_6|NZ_CP011635.1_73104_73611_+	NA	NA|251aa|down_7|NZ_CP011635.1_73716_74469_+	cd03020, DsbA_DsbC_DsbG, DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold	NA|317aa|down_8|NZ_CP011635.1_74478_75429_+	pfam09676, TraV, Type IV conjugative transfer system lipoprotein (TraV)	NA|894aa|down_9|NZ_CP011635.1_75437_78119_+	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC
GCF_001022195.1_ASM102219v1	NZ_CP011636	Klebsiella oxytoca strain CAV1374 chromosome, complete genome	1	509708-509798	1	CRISPRCasFinder	no		cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL	Orphan	TCCGGGCTACCCGAACGCAGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA,NA	NA|301aa|up_9|NZ_CP011636.1_497750_498653_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|103aa|up_8|NZ_CP011636.1_498803_499112_-	pfam01845, CcdB, CcdB protein	NA|79aa|up_7|NZ_CP011636.1_499114_499351_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|478aa|up_6|NZ_CP011636.1_499456_500890_-	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|301aa|up_5|NZ_CP011636.1_500914_501817_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|389aa|up_4|NZ_CP011636.1_501977_503144_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|455aa|up_3|NZ_CP011636.1_503194_504559_-	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|1036aa|up_2|NZ_CP011636.1_504562_507670_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|375aa|up_1|NZ_CP011636.1_507669_508794_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|139aa|up_0|NZ_CP011636.1_509246_509663_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|216aa|down_0|NZ_CP011636.1_509878_510526_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|499aa|down_1|NZ_CP011636.1_510606_512103_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|305aa|down_2|NZ_CP011636.1_512099_513014_-	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|207aa|down_3|NZ_CP011636.1_513116_513737_+	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|157aa|down_4|NZ_CP011636.1_513867_514338_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|270aa|down_5|NZ_CP011636.1_514593_515403_+	PRK09861, PRK09861, lipoprotein NlpA	NA|287aa|down_6|NZ_CP011636.1_515427_516288_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|185aa|down_7|NZ_CP011636.1_516279_516834_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|260aa|down_8|NZ_CP011636.1_517003_517783_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|318aa|down_9|NZ_CP011636.1_517797_518751_+	PRK09393, ftrA, transcriptional activator FtrA; Provisional
GCF_001022195.1_ASM102219v1	NZ_CP011636	Klebsiella oxytoca strain CAV1374 chromosome, complete genome	2	1819773-1819877	2	CRISPRCasFinder	no		cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL	Orphan	TGTCCCACCCTGTACCACTTTTTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA|267aa|up_7|NZ_CP011636.1_1813366_1814167_+,NA|211aa|up_6|NZ_CP011636.1_1814445_1815078_-,NA|91aa|up_0|NZ_CP011636.1_1819172_1819445_-,NA|65aa|down_4|NZ_CP011636.1_1825562_1825757_-,NA|215aa|down_6|NZ_CP011636.1_1826972_1827617_-,NA|230aa|down_9|NZ_CP011636.1_1829819_1830509_+	NA|188aa|up_9|NZ_CP011636.1_1811963_1812527_+	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase	NA|212aa|up_8|NZ_CP011636.1_1812550_1813186_+	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase	NA|267aa|up_7|NZ_CP011636.1_1813366_1814167_+	NA	NA|211aa|up_6|NZ_CP011636.1_1814445_1815078_-	NA	NA|341aa|up_5|NZ_CP011636.1_1815437_1816460_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|327aa|up_4|NZ_CP011636.1_1816470_1817451_-	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]	NA|125aa|up_3|NZ_CP011636.1_1817447_1817822_-	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]	NA|174aa|up_2|NZ_CP011636.1_1817818_1818340_-	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]	NA|137aa|up_1|NZ_CP011636.1_1818711_1819122_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|91aa|up_0|NZ_CP011636.1_1819172_1819445_-	NA	NA|690aa|down_0|NZ_CP011636.1_1819898_1821968_-	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|72aa|down_1|NZ_CP011636.1_1822003_1822219_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|323aa|down_2|NZ_CP011636.1_1822646_1823615_-	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|258aa|down_3|NZ_CP011636.1_1824551_1825325_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|65aa|down_4|NZ_CP011636.1_1825562_1825757_-	NA	NA|293aa|down_5|NZ_CP011636.1_1825917_1826796_-	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|215aa|down_6|NZ_CP011636.1_1826972_1827617_-	NA	NA|416aa|down_7|NZ_CP011636.1_1827618_1828866_-	PRK09692, PRK09692, integrase; Provisional	NA|208aa|down_8|NZ_CP011636.1_1829192_1829816_+	pfam14487, DUF4433, Domain of unknown function (DUF4433)	NA|230aa|down_9|NZ_CP011636.1_1829819_1830509_+	NA
GCF_001022195.1_ASM102219v1	NZ_CP011636	Klebsiella oxytoca strain CAV1374 chromosome, complete genome	3	3307641-3307766	3	CRISPRCasFinder	no		cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL	Orphan	AACCCGGGGAATATGCCGTGACGGGGTATTGCTG	34	1	1	3307675-3307732	NZ_CP011636.1_4176569-4176626	NA	1	1	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA,NA|274aa|down_3|NZ_CP011636.1_3311885_3312707_+,NA|169aa|down_8|NZ_CP011636.1_3316662_3317169_+	NA|70aa|up_9|NZ_CP011636.1_3298315_3298525_-	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|327aa|up_8|NZ_CP011636.1_3299331_3300312_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|233aa|up_7|NZ_CP011636.1_3300807_3301506_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|251aa|up_6|NZ_CP011636.1_3301515_3302268_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|281aa|up_5|NZ_CP011636.1_3302257_3303100_+	cd13710, PBP2_TcyK, Substrate binding domain of an ABC transporter TcyJKLMN; the type 2 periplasmic binding protein fold	NA|180aa|up_4|NZ_CP011636.1_3303104_3303644_+	pfam14196, ATC_hydrolase, L-2-amino-thiazoline-4-carboxylic acid hydrolase	NA|252aa|up_3|NZ_CP011636.1_3303631_3304387_+	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|263aa|up_2|NZ_CP011636.1_3304399_3305188_+	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]	NA|319aa|up_1|NZ_CP011636.1_3305184_3306141_-	pfam12852, Cupin_6, Cupin	NA|400aa|up_0|NZ_CP011636.1_3306249_3307449_+	PRK10213, nepI, purine ribonucleoside efflux pump NepI	NA|486aa|down_0|NZ_CP011636.1_3307993_3309451_-	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|318aa|down_1|NZ_CP011636.1_3309454_3310408_-	cd04513, Glycosylasparaginase, Glycosylasparaginase and similar proteins	NA|440aa|down_2|NZ_CP011636.1_3310412_3311732_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|274aa|down_3|NZ_CP011636.1_3311885_3312707_+	NA	NA|110aa|down_4|NZ_CP011636.1_3312818_3313148_-	pfam07978, NIPSNAP, NIPSNAP	NA|270aa|down_5|NZ_CP011636.1_3313437_3314247_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|319aa|down_6|NZ_CP011636.1_3314271_3315228_+	cd01148, TroA_a, Metal binding protein TroA_a	NA|336aa|down_7|NZ_CP011636.1_3315224_3316232_+	pfam01032, FecCD, FecCD transport family	NA|169aa|down_8|NZ_CP011636.1_3316662_3317169_+	NA	NA|159aa|down_9|NZ_CP011636.1_3317499_3317976_+	TIGR04366, hypothetical_protein, cupin fold metalloprotein, WbuC family
GCF_001022195.1_ASM102219v1	NZ_CP011636	Klebsiella oxytoca strain CAV1374 chromosome, complete genome	4	4437489-4437571	4	CRISPRCasFinder	no	DEDDh	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL	Unclear	TGGACACTGGCTGGACATCGGCTGGACA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA|75aa|up_9|NZ_CP011636.1_4430760_4430985_-,NA|105aa|up_5|NZ_CP011636.1_4432482_4432797_-,NA|64aa|up_4|NZ_CP011636.1_4433575_4433767_-,NA|153aa|up_1|NZ_CP011636.1_4434906_4435365_-,NA|49aa|down_0|NZ_CP011636.1_4437967_4438114_-,NA|42aa|down_5|NZ_CP011636.1_4440508_4440634_+,NA|65aa|down_6|NZ_CP011636.1_4440626_4440821_+,NA|132aa|down_7|NZ_CP011636.1_4441409_4441805_+,NA|48aa|down_8|NZ_CP011636.1_4441798_4441942_+	NA|75aa|up_9|NZ_CP011636.1_4430760_4430985_-	NA	NA|215aa|up_8|NZ_CP011636.1_4430981_4431626_-	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|57aa|up_7|NZ_CP011636.1_4431618_4431789_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|150aa|up_6|NZ_CP011636.1_4431781_4432231_-	pfam05772, NinB, NinB protein	NA|105aa|up_5|NZ_CP011636.1_4432482_4432797_-	NA	NA|64aa|up_4|NZ_CP011636.1_4433575_4433767_-	NA	NA|186aa|up_3|NZ_CP011636.1_4433766_4434324_-	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|195aa|up_2|NZ_CP011636.1_4434325_4434910_-	pfam13392, HNH_3, HNH endonuclease	NA|153aa|up_1|NZ_CP011636.1_4434906_4435365_-	NA	NA|472aa|up_0|NZ_CP011636.1_4435655_4437071_-	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|49aa|down_0|NZ_CP011636.1_4437967_4438114_-	NA	NA|74aa|down_1|NZ_CP011636.1_4438200_4438422_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|78aa|down_2|NZ_CP011636.1_4438462_4438696_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_3|NZ_CP011636.1_4438823_4439513_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|210aa|down_4|NZ_CP011636.1_4439759_4440389_+	pfam18757, Nmad5, Nucleotide modification associated domain 5	NA|42aa|down_5|NZ_CP011636.1_4440508_4440634_+	NA	NA|65aa|down_6|NZ_CP011636.1_4440626_4440821_+	NA	NA|132aa|down_7|NZ_CP011636.1_4441409_4441805_+	NA	NA|48aa|down_8|NZ_CP011636.1_4441798_4441942_+	NA	DEDDh|220aa|down_9|NZ_CP011636.1_4441935_4442595_+	PRK07983, PRK07983, exodeoxyribonuclease X; Provisional
GCF_001022195.1_ASM102219v1	NZ_CP011636	Klebsiella oxytoca strain CAV1374 chromosome, complete genome	5	5834773-5834911	5	CRISPRCasFinder	no		cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL	Orphan	TCTGCGCGGTATGGTAGCCCGGACAAGGCGCGTCAAGCGCCGCCTCCGGG	50	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,csa3,DEDDh,Cas9_archaeal,DinG,WYL,RT,PD-DExK	NA,NA	NA|384aa|up_9|NZ_CP011636.1_5826129_5827281_+	COG1775, HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism]	NA|256aa|up_8|NZ_CP011636.1_5827289_5828057_+	TIGR00241, Uncharacterized_protein_MJ0004, CoA-substrate-specific enzyme activase, putative	NA|85aa|up_7|NZ_CP011636.1_5828053_5828308_+	pfam11823, DUF3343, Protein of unknown function (DUF3343)	NA|368aa|up_6|NZ_CP011636.1_5828367_5829471_-	cd08018, M20_Acy1_amhX-like, M20 Peptidase aminoacylase 1 amhX-like subfamily	NA|156aa|up_5|NZ_CP011636.1_5829491_5829959_-	PRK10519, PRK10519, hypothetical protein; Provisional	NA|228aa|up_4|NZ_CP011636.1_5829951_5830635_-	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown]	NA|305aa|up_3|NZ_CP011636.1_5830947_5831862_+	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|355aa|up_2|NZ_CP011636.1_5831864_5832929_-	pfam11168, DUF2955, Protein of unknown function (DUF2955)	NA|356aa|up_1|NZ_CP011636.1_5832918_5833986_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|155aa|up_0|NZ_CP011636.1_5833992_5834457_-	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|55aa|down_0|NZ_CP011636.1_5835026_5835191_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|475aa|down_1|NZ_CP011636.1_5835368_5836793_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|327aa|down_2|NZ_CP011636.1_5837127_5838108_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|1088aa|down_3|NZ_CP011636.1_5838503_5841767_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|112aa|down_4|NZ_CP011636.1_5841990_5842326_+	PRK13605, PRK13605, endoribonuclease SymE; Provisional	NA|304aa|down_5|NZ_CP011636.1_5842777_5843689_+	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion]	NA|448aa|down_6|NZ_CP011636.1_5843685_5845029_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|101aa|down_7|NZ_CP011636.1_5845149_5845452_-	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown]	NA|96aa|down_8|NZ_CP011636.1_5845438_5845726_-	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown]	NA|148aa|down_9|NZ_CP011636.1_5845985_5846429_-	cd07244, FosA, fosfomycin resistant protein subfamily FosA
