assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001022115.1_ASM102211v1	NZ_CP011618	Klebsiella oxytoca strain CAV1335 chromosome, complete genome	1	121748-121847	1	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,WYL,csa3	Orphan	GCTCATTCTGACCGTTCGGCGGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,WYL,csa3	NA,NA	NA|468aa|up_9|NZ_CP011618.1_110802_112206_+	pfam09362, DUF1996, Domain of unknown function (DUF1996)	NA|527aa|up_8|NZ_CP011618.1_112393_113974_-	cd01535, 4RHOD_Repeat_4, Member of the Rhodanese Homology Domain superfamily, repeat 4	NA|199aa|up_7|NZ_CP011618.1_113975_114572_-	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]	NA|298aa|up_6|NZ_CP011618.1_114679_115573_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|362aa|up_5|NZ_CP011618.1_115718_116804_+	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite	NA|382aa|up_4|NZ_CP011618.1_116800_117946_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|325aa|up_3|NZ_CP011618.1_117957_118932_+	cd13558, PBP2_SsuA_like_2, Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold	NA|346aa|up_2|NZ_CP011618.1_118928_119966_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|332aa|up_1|NZ_CP011618.1_119946_120942_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|263aa|up_0|NZ_CP011618.1_120935_121724_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|674aa|down_0|NZ_CP011618.1_121903_123925_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|274aa|down_1|NZ_CP011618.1_124482_125304_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|342aa|down_2|NZ_CP011618.1_125300_126326_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|351aa|down_3|NZ_CP011618.1_126322_127375_+	pfam01032, FecCD, FecCD transport family	NA|316aa|down_4|NZ_CP011618.1_127391_128339_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|300aa|down_5|NZ_CP011618.1_128335_129235_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|257aa|down_6|NZ_CP011618.1_129330_130101_+	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|256aa|down_7|NZ_CP011618.1_130165_130933_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|241aa|down_8|NZ_CP011618.1_130916_131639_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|402aa|down_9|NZ_CP011618.1_131739_132945_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily
GCF_001022115.1_ASM102211v1	NZ_CP011618	Klebsiella oxytoca strain CAV1335 chromosome, complete genome	2	1412939-1417680	1	CRT	no		DEDDh,RT,cas3,DinG,WYL,csa3	Orphan	TCNNNGTCNGAATCNNNGTC	20	20	64	1413391-1413436|1413457-1413490|1413457-1413490|1413937-1413970|1413937-1413970|1413937-1413970|1413937-1413970|1414063-1414096|1414483-1414516|1414483-1414516|1414483-1414516|1414483-1414516|1414609-1414660|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414849-1414870|1414891-1414924|1414999-1415032|1415053-1415086|1415053-1415086|1415053-1415086|1415269-1415320|1415971-1416022|1416043-1416094|1416187-1416238|1416259-1416292|1416259-1416292|1416259-1416292|1416457-1416490|1416457-1416490|1416637-1416670|1417069-1417120|1417447-1417480|1417447-1417480|1417447-1417480|1417447-1417480|1417447-1417480|1417573-1417606|1417573-1417606|1417573-1417606|1417573-1417606|1417573-1417606	NZ_CP011618.1_1422700-1422745|NZ_CP011618.1_1421956-1421989|NZ_CP011618.1_1422316-1422349|NZ_CP011618.1_1421686-1421719|NZ_CP011618.1_1421920-1421953|NZ_CP011618.1_1422892-1422925|NZ_CP011618.1_1422910-1422943|NZ_CP011618.1_1422460-1422493|NZ_CP011618.1_1422640-1422673|NZ_CP011618.1_1412923-1412956|NZ_CP011618.1_1421956-1421989|NZ_CP011618.1_1422730-1422763|NZ_CP011618.1_1422262-1422313|NZ_CP011618.1_1422172-1422193|NZ_CP011618.1_1422298-1422319|NZ_CP011618.1_1422352-1422373|NZ_CP011618.1_1422550-1422571|NZ_CP011618.1_1422874-1422895|NZ_CP011618.1_1421776-1421797|NZ_CP011618.1_1421848-1421869|NZ_CP011618.1_1422244-1422265|NZ_CP011618.1_1422388-1422409|NZ_CP011618.1_1422514-1422535|NZ_CP011618.1_1422604-1422625|NZ_CP011618.1_1422784-1422805|NZ_CP011618.1_1412887-1412908|NZ_CP011618.1_1412905-1412926|NZ_CP011618.1_1421884-1421905|NZ_CP011618.1_1421902-1421923|NZ_CP011618.1_1422028-1422049|NZ_CP011618.1_1422046-1422067|NZ_CP011618.1_1422316-1422337|NZ_CP011618.1_1422334-1422355|NZ_CP011618.1_1422370-1422391|NZ_CP011618.1_1422568-1422589|NZ_CP011618.1_1422622-1422643|NZ_CP011618.1_1422730-1422751|NZ_CP011618.1_1423018-1423039|NZ_CP011618.1_1422178-1422211|NZ_CP011618.1_1422052-1422085|NZ_CP011618.1_1412911-1412944|NZ_CP011618.1_1422322-1422355|NZ_CP011618.1_1422628-1422661|NZ_CP011618.1_1421692-1421743|NZ_CP011618.1_1422196-1422247|NZ_CP011618.1_1421890-1421941|NZ_CP011618.1_1422196-1422247|NZ_CP011618.1_1412911-1412944|NZ_CP011618.1_1422322-1422355|NZ_CP011618.1_1422628-1422661|NZ_CP011618.1_1421692-1421725|NZ_CP011618.1_1422088-1422121|NZ_CP011618.1_1421872-1421905|NZ_CP011618.1_1422538-1422589|NZ_CP011618.1_1422286-1422319|NZ_CP011618.1_1421764-1421797|NZ_CP011618.1_1422340-1422373|NZ_CP011618.1_1422610-1422643|NZ_CP011618.1_1422772-1422805|NZ_CP011618.1_1421764-1421797|NZ_CP011618.1_1422304-1422337|NZ_CP011618.1_1422340-1422373|NZ_CP011618.1_1422358-1422391|NZ_CP011618.1_1422610-1422643	NA	67	67	Orphan	DEDDh,RT,cas3,DinG,WYL,csa3	NA|323aa|up_4|NZ_CP011618.1_1400602_1401571_-,NA	NA|94aa|up_9|NZ_CP011618.1_1397142_1397424_-	PRK14426, PRK14426, acylphosphatase; Provisional	NA|263aa|up_8|NZ_CP011618.1_1397476_1398265_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|185aa|up_7|NZ_CP011618.1_1398281_1398836_-	PRK09818, PRK09818, kinase inhibitor	NA|401aa|up_6|NZ_CP011618.1_1399026_1400229_+	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|106aa|up_5|NZ_CP011618.1_1400288_1400606_+	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|323aa|up_4|NZ_CP011618.1_1400602_1401571_-	NA	NA|1048aa|up_3|NZ_CP011618.1_1401613_1404757_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|402aa|up_2|NZ_CP011618.1_1404981_1406187_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|716aa|up_1|NZ_CP011618.1_1406183_1408331_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|479aa|up_0|NZ_CP011618.1_1408327_1409764_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|398aa|down_0|NZ_CP011618.1_1424172_1425366_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|138aa|down_1|NZ_CP011618.1_1425479_1425893_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|153aa|down_2|NZ_CP011618.1_1426047_1426506_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|685aa|down_3|NZ_CP011618.1_1426534_1428589_-	PRK11054, helD, DNA helicase IV; Provisional	NA|149aa|down_4|NZ_CP011618.1_1428711_1429158_+	COG3304, COG3304, Predicted membrane protein [Function unknown]	NA|712aa|down_5|NZ_CP011618.1_1429175_1431311_+	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|208aa|down_6|NZ_CP011618.1_1431298_1431922_-	pfam04993, TfoX_N, TfoX N-terminal domain	NA|170aa|down_7|NZ_CP011618.1_1432383_1432893_+	TIGR00623, Cell_division_inhibitor_SulA, cell division inhibitor SulA	NA|357aa|down_8|NZ_CP011618.1_1433246_1434317_+	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|151aa|down_9|NZ_CP011618.1_1434427_1434880_-	PRK05097, PRK05097, macrodomain Ter protein MatP
GCF_001022115.1_ASM102211v1	NZ_CP011618	Klebsiella oxytoca strain CAV1335 chromosome, complete genome	3	4731707-4731834	2	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,WYL,csa3	Orphan	TGTAGCCCGGATAAGGCGTCAGCCGCAATCCGGGA	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,WYL,csa3	NA,NA|71aa|down_4|NZ_CP011618.1_4735187_4735400_-	NA|309aa|up_9|NZ_CP011618.1_4718946_4719873_-	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional	NA|421aa|up_8|NZ_CP011618.1_4720007_4721270_+	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional	NA|334aa|up_7|NZ_CP011618.1_4721309_4722311_-	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|446aa|up_6|NZ_CP011618.1_4722614_4723952_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|476aa|up_5|NZ_CP011618.1_4723959_4725387_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|258aa|up_4|NZ_CP011618.1_4725455_4726229_+	PRK10225, PRK10225, Uxu operon transcriptional regulator	NA|160aa|up_3|NZ_CP011618.1_4726225_4726705_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|339aa|up_2|NZ_CP011618.1_4726665_4727682_-	PRK10727, PRK10727, HTH-type transcriptional regulator GalR	NA|720aa|up_1|NZ_CP011618.1_4728304_4730464_+	PRK08043, PRK08043, bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase	NA|398aa|up_0|NZ_CP011618.1_4730456_4731650_+	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional	NA|347aa|down_0|NZ_CP011618.1_4731954_4732995_-	PRK10625, tas, putative aldo-keto reductase; Provisional	NA|73aa|down_1|NZ_CP011618.1_4733232_4733451_-	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|238aa|down_2|NZ_CP011618.1_4733575_4734289_-	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP011618.1_4734475_4735171_-	PRK05070, PRK05070, DNA mismatch repair protein; Provisional	NA|71aa|down_4|NZ_CP011618.1_4735187_4735400_-	NA	NA|177aa|down_5|NZ_CP011618.1_4735853_4736384_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|749aa|down_6|NZ_CP011618.1_4736396_4738643_+	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase	NA|292aa|down_7|NZ_CP011618.1_4738938_4739814_+	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|265aa|down_8|NZ_CP011618.1_4739820_4740615_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|156aa|down_9|NZ_CP011618.1_4740835_4741303_+	PRK10506, PRK10506, prepilin peptidase-dependent protein
GCF_001022115.1_ASM102211v1	NZ_CP011618	Klebsiella oxytoca strain CAV1335 chromosome, complete genome	4	4943428-4943527	3	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,WYL,csa3	Orphan	TCCCGGAGGCGATGCTGCGCATCTGTCCGGGCTAC	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,WYL,csa3	NA,NA	NA|115aa|up_9|NZ_CP011618.1_4934939_4935284_-	PRK03681, hypA, hydrogenase/urease nickel incorporation protein HypA	NA|150aa|up_8|NZ_CP011618.1_4935492_4935942_+	PRK10198, PRK10198, formate hydrogenlyase regulator HycA	NA|203aa|up_7|NZ_CP011618.1_4936024_4936633_+	cd10554, HycB_like, HycB, HydN and similar proteins	NA|609aa|up_6|NZ_CP011618.1_4936629_4938456_+	PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed	NA|308aa|up_5|NZ_CP011618.1_4938458_4939382_+	COG0650, HyfC, Formate hydrogenlyase subunit 4 [Energy production and conversion]	NA|570aa|up_4|NZ_CP011618.1_4939399_4941109_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|181aa|up_3|NZ_CP011618.1_4941118_4941661_+	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|256aa|up_2|NZ_CP011618.1_4941660_4942428_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|137aa|up_1|NZ_CP011618.1_4942424_4942835_+	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|162aa|up_0|NZ_CP011618.1_4942827_4943313_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|341aa|down_0|NZ_CP011618.1_4943639_4944662_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|475aa|down_1|NZ_CP011618.1_4945021_4946446_-	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|481aa|down_2|NZ_CP011618.1_4946472_4947915_-	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|338aa|down_3|NZ_CP011618.1_4948171_4949185_+	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|176aa|down_4|NZ_CP011618.1_4949319_4949847_+	PRK10330, PRK10330, electron transport protein HydN	NA|740aa|down_5|NZ_CP011618.1_4949859_4952079_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|338aa|down_6|NZ_CP011618.1_4952090_4953104_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|378aa|down_7|NZ_CP011618.1_4953334_4954468_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|482aa|down_8|NZ_CP011618.1_4954464_4955910_-	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|515aa|down_9|NZ_CP011618.1_4956097_4957642_+	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR
GCF_001022115.1_ASM102211v1	NZ_CP011618	Klebsiella oxytoca strain CAV1335 chromosome, complete genome	5	5669641-5669725	4	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,WYL,csa3	Orphan	AGAGAGTTCCCCGCGCGAGCGGGG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,WYL,csa3	NA|110aa|up_6|NZ_CP011618.1_5663146_5663476_+,NA|50aa|up_3|NZ_CP011618.1_5665026_5665176_+,NA	NA|1246aa|up_9|NZ_CP011618.1_5655626_5659364_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|678aa|up_8|NZ_CP011618.1_5659500_5661534_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|370aa|up_7|NZ_CP011618.1_5661685_5662795_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|110aa|up_6|NZ_CP011618.1_5663146_5663476_+	NA	NA|106aa|up_5|NZ_CP011618.1_5663535_5663853_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|307aa|up_4|NZ_CP011618.1_5664022_5664943_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|50aa|up_3|NZ_CP011618.1_5665026_5665176_+	NA	NA|448aa|up_2|NZ_CP011618.1_5665264_5666608_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|604aa|up_1|NZ_CP011618.1_5666610_5668422_-	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	NA|309aa|up_0|NZ_CP011618.1_5668542_5669469_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|258aa|down_0|NZ_CP011618.1_5669958_5670732_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|267aa|down_1|NZ_CP011618.1_5670728_5671529_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|351aa|down_2|NZ_CP011618.1_5671677_5672730_+	PRK09250, PRK09250, class I fructose-bisphosphate aldolase	NA|536aa|down_3|NZ_CP011618.1_5672916_5674524_-	cd07782, FGGY_YpCarbK_like, Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases	NA|250aa|down_4|NZ_CP011618.1_5674554_5675304_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|334aa|down_5|NZ_CP011618.1_5675561_5676563_+	cd06274, PBP1_FruR, ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs	NA|314aa|down_6|NZ_CP011618.1_5676585_5677527_-	pfam04198, Sugar-bind, Putative sugar-binding domain	NA|456aa|down_7|NZ_CP011618.1_5677733_5679101_+	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]	NA|488aa|down_8|NZ_CP011618.1_5679110_5680574_+	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|426aa|down_9|NZ_CP011618.1_5680643_5681921_+	TIGR00897, Alpha-ketoglutarate_permease, polyol permease family
