The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	36518	48831	1896976		Synechococcus_phage(28.57%)	8	NA	NA
WP_002987703.1|36518_40244_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	1.1e-38
WP_021340854.1|40404_41859_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
WP_011284404.1|41886_42909_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	2.4e-63
WP_002987709.1|43076_43631_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
WP_002987711.1|43814_45362_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
WP_002987712.1|45419_46544_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_021340857.1|46796_48062_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002987716.1|48339_48831_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	586624	654172	1896976	transposase,integrase,tRNA,portal,holin,terminase,capsid	Temperate_phage(79.69%)	87	582908:582926	638721:638739
582908:582926	attL	TATCTGCTTGGGATAATAT	NA	NA	NA	NA
WP_000528441.1|586624_586768_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_021340693.1|586908_588261_+	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_000702264.1|588260_588818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011284995.1|588842_589604_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011284994.1|589826_590369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001188029.1|590541_590868_+	DUF771 domain-containing protein	NA	A0A2H4JAF6	uncultured_Caudovirales_phage	32.4	7.1e-06
WP_011284992.1|590917_592054_+|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	31.0	2.3e-43
WP_044564887.1|592390_593524_+|transposase	ISAs1-like element IS1548 family transposase	transposase	NA	NA	NA	NA
WP_002983750.1|593692_593947_+	DUF1912 family protein	NA	NA	NA	NA	NA
WP_002989018.1|593967_594363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021341207.1|594964_595528_+	ATPase AAA	NA	NA	NA	NA	NA
WP_011284987.1|595529_598178_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.4	2.3e-150
WP_002989028.1|598331_600740_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_010922512.1|600872_601601_+	type I-C CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
WP_011284986.1|601600_603496_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA	NA
WP_015057910.1|603500_604349_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA	NA
WP_011284984.1|604350_605025_+	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_011284983.1|605021_606047_+	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_002989044.1|606057_606351_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_011284982.1|606821_607532_+	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	NA	NA	NA	NA	NA
WP_011284981.1|607544_608168_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_002983779.1|608210_609317_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002986896.1|609427_610582_-|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	100.0	2.8e-206
WP_002986895.1|610700_611222_-	hypothetical protein	NA	Q938N8	Temperate_phage	100.0	2.3e-67
WP_002986894.1|611232_611613_-	hypothetical protein	NA	Q938N7	Temperate_phage	100.0	5.3e-69
WP_011054768.1|611626_611986_-	helix-turn-helix transcriptional regulator	NA	Q938N6	Temperate_phage	100.0	1.1e-60
WP_002986891.1|612781_612973_+	hypothetical protein	NA	A7J270	Streptococcus_phage	90.5	1.2e-24
WP_011054767.1|612983_613712_+	oxidoreductase	NA	Q938N5	Temperate_phage	100.0	6.9e-134
WP_002986887.1|613890_614091_-	KTSC domain-containing protein	NA	A0A1S5S8T9	Streptococcus_phage	72.3	6.3e-21
WP_011054766.1|614079_614334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988339.1|614579_614837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054765.1|614865_615051_+	hypothetical protein	NA	Q938N3	Temperate_phage	100.0	1.1e-24
WP_011106684.1|615144_615402_+	hypothetical protein	NA	A0A1S5SFN6	Streptococcus_phage	46.4	1.2e-11
WP_023079816.1|615547_615937_+	DnaD domain protein	NA	Q938N2	Temperate_phage	99.2	1.1e-58
WP_011054762.1|615917_616151_+	hypothetical protein	NA	Q938N1	Temperate_phage	100.0	5.0e-38
WP_011054761.1|616298_616553_+	hypothetical protein	NA	Q938N0	Temperate_phage	100.0	7.4e-43
WP_047297970.1|616574_617057_+	siphovirus Gp157 family protein	NA	Q938M9	Temperate_phage	99.4	5.3e-50
WP_011054760.1|617057_617732_+	ERF family protein	NA	Q938M8	Temperate_phage	100.0	2.5e-106
WP_011054759.1|617724_618144_+	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	100.0	1.6e-71
WP_011106686.1|618149_618353_+	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
WP_011054758.1|618352_618793_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.3	8.5e-79
WP_011054757.1|618789_619146_+	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	85.6	1.6e-51
WP_011054756.1|619142_619394_+	hypothetical protein	NA	Q938M4	Temperate_phage	100.0	6.8e-41
WP_011054755.1|619387_619672_+	DUF3310 domain-containing protein	NA	Q938M3	Temperate_phage	100.0	5.4e-50
WP_011054754.1|619668_619938_+	hypothetical protein	NA	Q938M2	Temperate_phage	100.0	4.0e-47
WP_011054753.1|619947_620352_+	hypothetical protein	NA	Q938M1	Temperate_phage	100.0	6.0e-71
WP_011054751.1|620515_621022_+	DUF1642 domain-containing protein	NA	Q938L9	Temperate_phage	100.0	9.8e-95
WP_011017866.1|621462_621903_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	100.0	5.0e-79
WP_011054748.1|622541_622799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002986854.1|622879_623398_+	ParB N-terminal domain-containing protein	NA	Q938L7	Temperate_phage	100.0	1.5e-90
WP_002986850.1|623376_624054_+	hypothetical protein	NA	Q938L6	Temperate_phage	100.0	8.7e-131
WP_002986845.1|624176_624446_+	hypothetical protein	NA	B5SP24	Lactococcus_phage	51.1	2.8e-16
WP_002986841.1|624506_624884_+	ASCH domain-containing protein	NA	Q938L5	Temperate_phage	100.0	1.7e-67
WP_011054747.1|624934_625408_+	hypothetical protein	NA	Q938L4	Temperate_phage	99.4	4.3e-76
WP_010922074.1|625490_626702_+|terminase	PBSX family phage terminase large subunit	terminase	Q938L3	Temperate_phage	99.7	3.7e-225
WP_002986832.1|626715_628218_+|portal	phage portal protein	portal	Q938L2	Temperate_phage	100.0	5.4e-282
WP_011054746.1|628222_629701_+|capsid	phage capsid protein	capsid	Q938L1	Temperate_phage	100.0	8.2e-275
WP_002986829.1|629672_629912_+	hypothetical protein	NA	Q938L0	Temperate_phage	100.0	2.8e-36
WP_011054745.1|629973_630240_+	hypothetical protein	NA	Q938K9	Temperate_phage	100.0	1.5e-38
WP_011054744.1|630371_630980_+	hypothetical protein	NA	Q938K8	Temperate_phage	100.0	1.3e-96
WP_010922080.1|630983_631802_+|capsid	N4-gp56 family major capsid protein	capsid	Q79S85	Temperate_phage	100.0	4.0e-146
WP_011054743.1|631855_632272_+	hypothetical protein	NA	Q938K7	Temperate_phage	100.0	1.1e-56
WP_010922082.1|632261_632594_+	hypothetical protein	NA	Q79S86	Temperate_phage	100.0	9.6e-59
WP_010922083.1|632593_632950_+	hypothetical protein	NA	Q79S88	Temperate_phage	100.0	4.5e-62
WP_010922084.1|632946_633345_+|capsid	phage capsid protein	capsid	Q79S87	Temperate_phage	100.0	3.5e-71
WP_011054741.1|633344_633830_+	hypothetical protein	NA	Q938K6	Temperate_phage	100.0	1.6e-86
WP_011054740.1|633868_634303_+	hypothetical protein	NA	Q938K5	Temperate_phage	100.0	2.6e-72
WP_011054739.1|634306_634888_+	hypothetical protein	NA	Q938K4	Temperate_phage	100.0	1.3e-106
WP_011054738.1|634877_638138_+	tape measure protein	NA	Q938K3	Temperate_phage	99.9	0.0e+00
WP_011054737.1|638134_638851_+	hypothetical protein	NA	Q938K2	Temperate_phage	100.0	2.9e-137
638721:638739	attR	TATCTGCTTGGGATAATAT	NA	NA	NA	NA
WP_047297976.1|638847_640995_+	peptidase	NA	Q938K1	Temperate_phage	94.7	0.0e+00
WP_011284843.1|640991_642206_+	hypothetical protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
WP_021340983.1|642207_642522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047297978.1|642532_644419_+	phage hyaluronidase	NA	Q938J9	Temperate_phage	96.3	6.2e-243
WP_002987513.1|644430_644862_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	100.0	1.1e-73
WP_011054733.1|644864_645476_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	100.0	2.7e-91
WP_011054732.1|645486_645783_+	hypothetical protein	NA	Q938J6	Temperate_phage	100.0	7.5e-47
WP_011054731.1|645779_645965_+	hypothetical protein	NA	Q938J5	Temperate_phage	100.0	1.7e-25
WP_011054730.1|646075_647278_+	CHAP domain-containing protein	NA	Q938J4	Temperate_phage	100.0	3.3e-242
WP_011017840.1|647417_647942_+	DUF4065 domain-containing protein	NA	Q938J3	Temperate_phage	100.0	4.0e-99
WP_011054729.1|647929_648796_+	DUF334 domain-containing protein	NA	Q938J2	Temperate_phage	100.0	3.7e-134
WP_011054728.1|649098_649878_+	streptococcal pyrogenic exotoxin SpeK	NA	Q938J1	Temperate_phage	100.0	5.4e-145
WP_011054727.1|650353_650929_+	hypothetical protein	NA	Q938J0	Temperate_phage	100.0	1.7e-111
WP_011106694.1|650922_651210_+	hypothetical protein	NA	Q938I9	Temperate_phage	100.0	2.4e-29
WP_011054726.1|651274_651457_+	hypothetical protein	NA	A3F673	Streptococcus_phage	76.7	2.6e-18
WP_011054725.1|651701_652442_+	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	32.4	8.0e-05
WP_011284967.1|652438_654172_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.2	3.9e-26
>prophage 3
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	842713	893382	1896976	integrase,tail,portal,terminase,head	Streptococcus_phage(44.64%)	66	846080:846139	892252:892347
WP_011284887.1|842713_844978_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
WP_002989605.1|845234_845855_-	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
846080:846139	attL	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGA	NA	NA	NA	NA
WP_023079773.1|846217_847306_-|integrase	site-specific integrase	integrase	Q38159	Streptococcus_phage	98.6	3.0e-202
WP_023079768.1|847555_848365_-	toxin-antitoxin system toxin component MazF family	NA	J7KDP1	Streptococcus_phage	35.8	2.9e-24
WP_011284884.1|848377_849121_-	helix-turn-helix domain-containing protein	NA	A0A1S5S8T5	Streptococcus_phage	62.9	2.5e-75
WP_021341080.1|849613_849829_-	hypothetical protein	NA	J7KBX0	Streptococcus_phage	95.7	2.5e-28
WP_011284882.1|850075_850675_-	hypothetical protein	NA	A0A097PAT4	Streptococcus_pyogenes_phage	100.0	3.1e-108
WP_011284881.1|850728_850938_+	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	100.0	1.7e-32
WP_011054589.1|850926_851313_-	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
WP_002984281.1|851386_851614_+	hypothetical protein	NA	A0A141E1R7	Streptococcus_phage	57.3	2.9e-14
WP_047298031.1|851721_852231_-	hypothetical protein	NA	H9A0R0	Staphylococcus_phage	30.6	4.4e-10
WP_002984292.1|852489_852699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284879.1|852848_853088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054585.1|853254_853440_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
WP_011017882.1|853518_853815_+	hypothetical protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	98.0	3.1e-48
WP_011284878.1|854029_854359_+	hypothetical protein	NA	J7KBZ0	Streptococcus_phage	41.8	7.9e-13
WP_002984315.1|854358_854553_+	hypothetical protein	NA	J7KK69	Streptococcus_phage	54.2	3.9e-12
WP_011284877.1|854549_854834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984321.1|854830_855514_+	AAA family ATPase	NA	J7KC09	Streptococcus_phage	99.1	9.4e-125
WP_075340263.1|855549_856953_+	DEAD/DEAH box helicase	NA	A0A1P8BMH7	Lactococcus_phage	72.3	2.3e-194
WP_002984328.1|856957_857440_+	DUF669 domain-containing protein	NA	A0A1P8BM40	Lactococcus_phage	70.7	9.7e-60
WP_011284875.1|857457_859011_+	hypothetical protein	NA	A0A1P8BM51	Lactococcus_phage	70.6	5.7e-210
WP_014635521.1|859279_860149_+	hypothetical protein	NA	A0A1P8BME8	Lactococcus_phage	65.6	5.8e-103
WP_023079767.1|860102_860453_+	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	88.5	9.9e-46
WP_011284873.1|860436_860793_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	100.0	2.9e-61
WP_002995955.1|861034_861271_+	DUF3310 domain-containing protein	NA	A0A097PAQ7	Streptococcus_pyogenes_phage	100.0	2.4e-40
WP_011284869.1|861434_861719_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	86.2	2.6e-36
WP_011888685.1|861720_862353_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.6	5.1e-85
WP_011888686.1|862357_862837_+	DUF1642 domain-containing protein	NA	A0A141E0J6	Streptococcus_phage	41.9	6.5e-24
WP_011284866.1|863285_863720_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	97.9	6.2e-74
WP_011284864.1|864297_865212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990048.1|865301_865514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002987543.1|865829_866207_-	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	44.0	3.3e-15
WP_001132273.1|866258_866444_-	addiction module toxin, HicA family	NA	D6PSW1	Lactobacillus_phage	54.0	1.7e-09
WP_044564892.1|866506_866974_+|terminase	terminase small subunit	terminase	A0A141E1Y3	Streptococcus_phage	70.8	1.1e-52
WP_020833530.1|866951_868259_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.7	2.0e-184
WP_002984369.1|868270_869773_+|portal	phage portal protein	portal	C9W9H5	Streptococcus_virus	54.5	1.9e-141
WP_011284860.1|869753_871316_+|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	44.2	2.5e-48
WP_002988389.1|871319_871505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011284859.1|871574_871889_+	hypothetical protein	NA	M1PLI3	Streptococcus_phage	72.8	6.8e-38
WP_011284858.1|871891_872158_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	70.5	1.9e-25
WP_023079765.1|872301_872835_+	DUF4355 domain-containing protein	NA	A0A141E0S7	Streptococcus_phage	80.7	6.8e-14
WP_011284856.1|872844_873225_+|head	head decoration protein	head	A0A0K2CNR0	Brevibacillus_phage	32.5	1.8e-05
WP_011284855.1|873227_874310_+	hypothetical protein	NA	A0A2H4J022	uncultured_Caudovirales_phage	57.1	3.4e-105
WP_011284854.1|874319_874562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984392.1|874575_874929_+	hypothetical protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
WP_011284852.1|874925_875234_+	hypothetical protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	7.4e-13
WP_030126607.1|875214_875580_+	HK97 gp10 family phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	5.9e-17
WP_011284850.1|875576_875966_+	hypothetical protein	NA	B5SP36	Lactococcus_phage	68.2	4.2e-45
WP_030126608.1|876020_876644_+|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	50.5	3.2e-39
WP_002990023.1|876697_877051_+	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	48.6	5.5e-20
WP_021340179.1|877125_877422_+	hypothetical protein	NA	A0A0S2MYH1	Enterococcus_phage	42.2	1.3e-09
WP_011284846.1|877436_881072_+	tape measure protein	NA	C5IUK3	Streptococcus_phage	41.4	1.2e-85
WP_011284845.1|881103_881883_+	hypothetical protein	NA	A3F655	Streptococcus_phage	54.0	1.9e-65
WP_011284844.1|881879_883934_+	hypothetical protein	NA	A3F656	Streptococcus_phage	84.1	0.0e+00
WP_011284843.1|883930_885145_+	hypothetical protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
WP_021340983.1|885146_885461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011284841.1|885471_887367_+	hypothetical protein	NA	Q938J9	Temperate_phage	52.5	5.9e-76
WP_011284840.1|887544_888162_+	hypothetical protein	NA	A3F662	Streptococcus_phage	94.6	9.8e-89
WP_002990012.1|888172_888469_+	hypothetical protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
WP_011284839.1|888465_888651_+	hypothetical protein	NA	Q938J5	Temperate_phage	96.7	6.6e-25
WP_011284838.1|888762_890097_+	lysin	NA	Q5MY96	Streptococcus_phage	93.0	1.3e-247
WP_002985327.1|890172_890880_-	streptococcal pyrogenic exotoxin SpeC	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.1	3.9e-09
WP_011184727.1|890990_891749_-	DNase Mf2	NA	NA	NA	NA	NA
WP_002993136.1|891988_892177_+	hypothetical protein	NA	A3F673	Streptococcus_phage	76.3	2.1e-18
WP_002989607.1|892767_893382_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
892252:892347	attR	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATTGATGGAGCTGGTGGGAGT	NA	NA	NA	NA
>prophage 4
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	1245585	1256189	1896976		Streptococcus_phage(57.14%)	9	NA	NA
WP_011184383.1|1245585_1246728_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
WP_014407485.1|1246962_1247403_+	membrane protein	NA	NA	NA	NA	NA
WP_002990257.1|1247432_1248701_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_011284677.1|1248788_1250141_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.0e-29
WP_002990260.1|1250362_1250704_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
WP_002990262.1|1250764_1251931_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_002985140.1|1252024_1252711_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_011284674.1|1252707_1253871_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	64.9	4.5e-143
WP_030126548.1|1253978_1256189_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.8	2.5e-267
>prophage 5
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	1534536	1540410	1896976		Streptococcus_phage(100.0%)	8	NA	NA
WP_021340916.1|1534536_1535364_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.9	1.7e-128
WP_011284536.1|1535437_1535794_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_011284535.1|1536092_1536722_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002985833.1|1536768_1537161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002985836.1|1537187_1538051_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_002985838.1|1538055_1538379_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_002985844.1|1538881_1539757_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.6	2.1e-68
WP_002990917.1|1539774_1540410_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
>prophage 6
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	1803400	1823625	1896976	integrase,holin	Streptococcus_phage(56.25%)	26	1806599:1806619	1820926:1820946
WP_011285269.1|1803400_1804621_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.8	1.6e-05
WP_021340699.1|1804631_1806614_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	1.3e-62
1806599:1806619	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
WP_003058754.1|1806708_1807860_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	44.9	3.6e-84
WP_011185066.1|1808108_1808252_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_003058809.1|1809113_1809881_-	helix-turn-helix domain-containing protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
WP_002992503.1|1810034_1810241_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
WP_002992502.1|1810274_1810475_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SE31	Streptococcus_phage	56.7	3.4e-11
WP_002992501.1|1810495_1810903_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
WP_011185071.1|1811314_1811842_+	hypothetical protein	NA	R9QNB1	Lactococcus_phage	40.2	9.7e-21
WP_011285273.1|1812068_1812263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285274.1|1812462_1812654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000916926.1|1812794_1813247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285276.1|1813348_1813681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021340709.1|1813680_1813872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003058810.1|1813883_1814213_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922766.1|1814215_1814488_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	3.6e-19
WP_011285278.1|1814488_1815355_+	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	73.8	6.1e-121
WP_011285279.1|1815366_1816761_+	phage protein	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
WP_011285280.1|1817054_1817309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285281.1|1817305_1817479_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
WP_011285283.1|1817659_1818169_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.9e-29
WP_002992480.1|1818242_1818731_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
WP_011285284.1|1819134_1819497_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_011285285.1|1819471_1819855_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	41.7	3.7e-14
WP_011285286.1|1820019_1820673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285287.1|1821069_1823625_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	6.8e-43
1820926:1820946	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
>prophage 7
NZ_CP011535	Streptococcus pyogenes strain M28PF1 chromosome, complete genome	1896976	1850035	1860017	1896976	integrase	Streptococcus_phage(75.0%)	15	1849609:1849623	1857171:1857185
1849609:1849623	attL	AATCCTTGAAGCTGT	NA	NA	NA	NA
WP_000694580.1|1850035_1850209_-	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
WP_011285313.1|1850495_1852109_-	hypothetical protein	NA	A0A1P8BMF9	Lactococcus_phage	53.1	2.4e-147
WP_011285314.1|1852098_1852620_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285315.1|1852629_1852998_-	hypothetical protein	NA	A0A1X9I6M4	Streptococcus_phage	47.1	2.6e-12
WP_021340713.1|1852906_1853098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285317.1|1853097_1853430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285318.1|1853441_1853624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014407970.1|1853844_1854087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285320.1|1854143_1854710_-	hypothetical protein	NA	A0A0A7S0G2	Clostridium_phage	42.9	5.0e-23
WP_011285321.1|1854725_1854914_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U7	Streptococcus_phage	59.7	1.7e-12
WP_011285322.1|1855082_1855526_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	48.6	1.8e-07
WP_011285323.1|1855705_1856869_+|integrase	site-specific integrase	integrase	A0A1X9I6A9	Streptococcus_phage	70.5	2.8e-161
WP_002982092.1|1857025_1857637_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
1857171:1857185	attR	ACAGCTTCAAGGATT	NA	NA	NA	NA
WP_002991405.1|1858366_1858639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002991408.1|1858655_1860017_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	63.7	1.0e-154
