The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	0	13001	2819334		Chrysochromulina_ericina_virus(20.0%)	11	NA	NA
WP_000106336.1|280_1891_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	3.3e-19
WP_072419897.1|1979_2108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602079.1|2252_4181_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.0	2.7e-52
WP_001283612.1|4433_5069_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_072362300.1|5423_6452_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581077.1|6511_6736_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052267.1|6943_8194_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	30.8	2.2e-39
WP_000790329.1|8376_9327_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141427.1|9475_10960_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	6.8e-19
WP_001253302.1|10956_11916_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|12284_13001_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 2
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	19265	114081	2819334	terminase,head,capsid,protease,holin,integrase,portal,tail	Staphylococcus_phage(87.67%)	108	23220:23237	69680:69697
WP_000197635.1|19265_20009_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000917289.1|20183_20468_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|20543_22160_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000128898.1|22861_23074_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_001293059.1|23070_23661_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	94.7	1.2e-96
23220:23237	attL	ATATATACAAGAACAAAA	NA	NA	NA	NA
WP_072419900.1|23977_24415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000022887.1|24520_24964_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001045079.1|25817_27125_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000825510.1|27285_28197_+	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000812008.1|28258_29104_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000206623.1|29475_30699_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000791417.1|31134_32187_+	bi-component leukocidin LukGH subunit H	NA	A0A2I6PDF3	Staphylococcus_phage	32.1	1.6e-35
WP_000595401.1|32208_33225_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
WP_000857194.1|34343_35381_-|integrase	site-specific integrase	integrase	E9LT82	Staphylococcus_phage	99.7	1.0e-194
WP_000733771.1|35464_36193_-	staphylococcal enterotoxin type K	NA	A0EX09	Staphylococcus_phage	32.3	6.4e-23
WP_001033320.1|36216_36945_-	staphylococcal enterotoxin type Q	NA	A0EX09	Staphylococcus_phage	34.9	2.3e-28
WP_001208482.1|37140_37911_-	helix-turn-helix domain-containing protein	NA	A0A1P8L6G7	Staphylococcus_phage	100.0	6.2e-141
WP_000338186.1|38069_38294_+	DUF739 family protein	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
WP_000435341.1|38311_38572_+	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000351243.1|38595_39135_-	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_001148337.1|39191_39941_+	antirepressor	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
WP_001148861.1|39956_40154_+	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_000939496.1|40184_40325_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_000275058.1|40339_40972_-	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_001120197.1|41030_41351_+	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000066020.1|41347_41509_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000291488.1|41601_41862_+	DUF1108 family protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
WP_001205732.1|41870_42134_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_025175236.1|42142_44086_+	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	99.1	0.0e+00
WP_000138475.1|44087_45008_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_072353921.1|45088_45706_+	MBL fold metallo-hydrolase	NA	A0A1W6JPL3	Staphylococcus_phage	98.1	1.3e-85
WP_000934765.1|45706_46177_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	96.2	7.7e-78
WP_000148328.1|46206_47100_+	DnaD domain-containing protein	NA	A0A0E3TAG7	Staphylococcus_phage	97.6	1.6e-137
WP_000338527.1|47106_47325_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	98.6	4.0e-37
WP_000401978.1|47333_47738_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0H3U2W2	Staphylococcus_phage	91.0	6.9e-67
WP_000595265.1|48078_48228_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001005262.1|48386_49037_+	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_001570807.1|49036_49237_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
WP_000282755.1|49259_49730_+	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	99.3	1.7e-69
WP_000406191.1|49844_50297_+	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	100.0	1.4e-79
WP_000817289.1|50312_50657_+	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_000919026.1|50785_51253_+|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000133304.1|51255_52950_+|terminase	phage terminase large subunit	terminase	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
WP_000644964.1|52924_53164_+	membrane protein	NA	A7TWC1	Staphylococcus_phage	98.7	1.2e-34
WP_072419899.1|53229_54420_+|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	99.7	2.0e-223
WP_000032525.1|54412_54997_+|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_000849950.1|55084_56332_+|capsid	phage major capsid protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
WP_001252099.1|56367_56526_+	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_001177483.1|56534_56867_+|head,tail	phage head-tail adapter protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
WP_000975314.1|56853_57189_+|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_000501244.1|57188_57566_+	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000611454.1|57562_57943_+	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	99.2	2.2e-67
WP_000570652.1|57943_58897_+|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
WP_000442601.1|58961_59408_+	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000570353.1|59467_59590_+	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	100.0	6.9e-15
WP_001133533.1|59645_64295_+|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	94.7	0.0e+00
WP_001154317.1|64294_65785_+|tail	phage tail protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
WP_000582131.1|65800_69583_+	hypothetical protein	NA	A0A1X9H096	Staphylococcus_phage	99.5	0.0e+00
WP_001000058.1|69575_69728_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
69680:69697	attR	ATATATACAAGAACAAAA	NA	NA	NA	NA
WP_001262624.1|69773_70061_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	98.9	2.2e-43
WP_000340977.1|70116_70491_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_000750412.1|70863_71637_+	staphylococcal enterotoxin type A	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
WP_011447039.1|71745_71922_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|71974_72082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|72133_72388_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|72399_73155_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000920039.1|73345_73837_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	98.8	6.8e-85
WP_165495560.1|74481_74823_+	hypothetical protein	NA	R9QTN8	Staphylococcus_phage	95.6	4.2e-57
WP_000702263.1|75334_75685_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|75737_75998_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669791.1|76308_76488_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001793419.1|77445_79191_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068523.1|79819_81106_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|81305_81404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|81646_81823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691584.1|82081_82462_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991301.1|82458_83355_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645726.1|83355_84036_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|84032_84905_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_001221657.1|84904_85645_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|85710_86274_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|86394_86919_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|86978_87536_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713072.1|87532_88375_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188043.1|88431_89472_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000267034.1|89922_90096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205106.1|90668_91070_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000181322.1|91339_92368_+	lactonase family protein	NA	NA	NA	NA	NA
WP_001021214.1|92487_93867_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001790680.1|93918_94092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140871.1|94286_95216_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_000149686.1|95268_95829_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275710.1|96200_97298_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.3	1.6e-46
WP_000323164.1|97502_99065_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_001802312.1|99075_99183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001177816.1|99254_100049_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_000897635.1|100068_101145_-	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_000284425.1|101328_102798_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	1.7e-107
WP_000040866.1|102790_103612_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000011542.1|103882_104485_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669861.1|104465_104639_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000434534.1|104930_105257_-	staphostatin A	NA	NA	NA	NA	NA
WP_000827761.1|105287_106454_-|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000572878.1|107314_108610_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|108718_109021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272070.1|109192_109885_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992921.1|109881_112074_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774565.1|112077_114081_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
>prophage 3
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	121141	126169	2819334		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|121141_122089_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147864.1|122169_123531_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.8	6.3e-104
WP_000548780.1|123700_124231_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140176.1|124477_125548_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|125614_126169_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 4
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	129622	130036	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001837236.1|129622_130036_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	37.7	2.3e-17
>prophage 5
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	135149	135779	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|135149_135779_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 6
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	151250	152987	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|151250_152987_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 7
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	169600	170329	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_001144055.1|169600_170329_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
>prophage 8
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	180992	181337	2819334		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|180992_181337_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 9
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	190919	191660	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216873.1|190919_191660_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-24
>prophage 10
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	200540	277717	2819334	tRNA,transposase,protease	Staphylococcus_phage(94.83%)	72	NA	NA
WP_000206350.1|200540_201329_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
WP_001086056.1|201341_201797_-	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.2	6.3e-61
WP_000473596.1|202693_203629_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782464.1|203630_204614_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000416759.1|204855_204999_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000416756.1|205735_205879_+	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_001092608.1|205943_208937_+	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.0	0.0e+00
WP_000566596.1|208929_210174_+	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_000504439.1|210189_210708_+	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000691541.1|210717_212091_+	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_001096791.1|212113_212806_+	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000581552.1|212802_213564_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_000586140.1|213560_214259_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_001092763.1|214732_215299_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_001005059.1|216262_216970_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	99.6	7.7e-130
WP_001039444.1|217094_217817_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	100.0	6.4e-132
WP_001038865.1|217874_218594_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	100.0	1.1e-131
WP_001038709.1|218714_219434_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.2	9.2e-131
WP_001791797.1|219498_219633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001793440.1|219613_221353_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_000072623.1|221345_222545_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	1.6e-228
WP_000831218.1|223394_227507_+	SMEK domain-containing protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_002868972.1|228045_228405_+	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001791893.1|228752_228854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|228976_229072_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001549059.1|229274_229418_+|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_000070811.1|230021_230405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000375477.1|230415_230592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000864135.1|230965_231433_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	100.0	3.3e-65
WP_000414202.1|231720_232293_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	89.7	3.3e-22
WP_000627541.1|232393_232735_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	8.1e-53
WP_000669017.1|232775_233402_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	94.7	3.6e-91
WP_000070649.1|233475_234471_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	4.2e-73
WP_001793444.1|234551_235202_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	99.1	3.0e-56
WP_072419835.1|235504_235960_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.3	5.7e-78
WP_000348356.1|236118_237597_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.6e-281
WP_000778532.1|237601_238603_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.8e-186
WP_000718107.1|238599_238857_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|238922_239396_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_016169057.1|239400_240147_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	99.2	2.2e-143
WP_000109910.1|240524_242117_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933822.1|242488_243682_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366158.1|243806_244715_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.0	1.7e-137
WP_000453314.1|244926_245760_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	100.0	5.4e-159
WP_000623476.1|246142_246496_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	98.3	2.0e-22
WP_001200542.1|246492_246858_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091445.1|247113_247416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|247675_248389_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168907.1|248828_249464_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|249759_250203_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|250189_250633_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671052.1|250745_251216_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_000384171.1|251414_251639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|251914_252769_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989116.1|252855_254148_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.8	1.1e-227
WP_000221179.1|254147_254462_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_001261671.1|254984_256487_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.5e-29
WP_000384184.1|256979_258011_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.7	1.6e-197
WP_000493886.1|258017_258650_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	6.4e-112
WP_001159035.1|258660_259842_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
WP_001008549.1|259854_260319_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196354.1|260440_261442_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001790712.1|261553_261673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|261675_262503_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|263076_263478_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|263597_264161_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|264157_265111_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025071.1|265220_266402_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	6.2e-217
WP_001108725.1|266692_269113_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.7	0.0e+00
WP_000836465.1|269134_269446_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001050541.1|269771_276332_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	96.8	5.9e-301
WP_000285019.1|276448_277717_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	100.0	4.1e-57
>prophage 11
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	289256	294584	2819334		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091389.1|289256_290114_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	99.3	4.4e-71
WP_001048368.1|290142_290739_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118311.1|290759_294584_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 12
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	303336	305043	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862075.1|303336_305043_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 13
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	311660	314291	2819334	tRNA,protease	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|311660_312923_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|313016_314291_-|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 14
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	318060	322195	2819334		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808850.1|318060_319665_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291417.1|319651_320812_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553929.1|320925_321372_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174285.1|321451_322195_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.0	4.9e-18
>prophage 15
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	339928	343126	2819334		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226910.1|339928_343126_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.7	7.7e-137
>prophage 16
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	348059	349817	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232648.1|348059_349817_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 17
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	354701	362864	2819334		Feldmannia_irregularis_virus(25.0%)	4	NA	NA
WP_000080029.1|354701_355406_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|355405_357067_+	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_001038308.1|359345_361976_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114452.1|361991_362864_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.0e-42
>prophage 18
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	366779	377931	2819334	tRNA,protease	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808624.1|366779_367700_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.7	2.8e-31
WP_001790562.1|367792_367915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|368111_370049_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049154.1|370474_371968_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|372196_372724_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|372752_372953_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|372999_373356_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032650.1|373497_374106_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	1.9e-20
WP_001280022.1|374124_375054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|375058_375169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047211849.1|375216_376518_+	trigger factor	NA	NA	NA	NA	NA
WP_000472304.1|376668_377931_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	2.9e-140
>prophage 19
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	387498	390129	2819334	tRNA	Catovirus(100.0%)	1	NA	NA
WP_000425353.1|387498_390129_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
>prophage 20
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	400320	435819	2819334	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005768.1|400320_401325_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|401326_402352_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|402374_403514_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|403532_403793_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|404067_406347_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594997.1|406549_408823_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	3.1e-63
WP_000364542.1|408844_409363_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058587.1|409790_411980_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|411991_412444_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|412440_413316_+	SH3 domain-containing protein	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|413776_415039_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|415054_416821_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|417153_417282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|417281_418055_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102740.1|418215_419490_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000704122.1|419574_419997_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|420096_420279_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|420318_420465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985895.1|420701_421715_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409158.1|422026_423169_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066094.1|423169_424288_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567030.1|424868_425537_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283308.1|425538_428016_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.5e-66
WP_000734072.1|428358_430989_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|431051_431312_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|431315_431744_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|431758_432067_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342266.1|432351_432990_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	1.6e-09
WP_000137775.1|432992_433916_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848309.1|433927_435196_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|435195_435819_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 21
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	442488	445168	2819334		Lactococcus_phage(50.0%)	2	NA	NA
WP_000542318.1|442488_443709_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	6.5e-52
WP_029644402.1|444403_445168_+	enterotoxin	NA	A0A1X9H080	Staphylococcus_phage	39.8	1.2e-48
>prophage 22
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	451659	458601	2819334		Indivirus(25.0%)	6	NA	NA
WP_001793467.1|451659_452346_+	ComEA family DNA-binding protein	NA	A0A1V0SDW0	Indivirus	30.4	7.5e-05
WP_000439693.1|452437_452899_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_000953315.1|452957_455105_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	5.9e-32
WP_001282568.1|455161_456136_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|456180_456432_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368337.1|456777_458601_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 23
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	462153	465261	2819334		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|462153_463986_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|464121_465261_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 24
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	471731	472679	2819334		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|471731_472679_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 25
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	475733	489479	2819334	tRNA	Klosneuvirus(25.0%)	13	NA	NA
WP_001030080.1|475733_477125_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|477459_478083_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|478093_478912_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217235.1|478972_480790_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	7.9e-54
WP_001283055.1|481013_482120_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624585.1|482250_482928_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683932.1|482930_484031_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_001062177.1|484144_485491_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924220.1|485500_486391_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001213908.1|486516_487302_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564316.1|487343_488207_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|488193_488604_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|488879_489479_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 26
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	495652	496276	2819334		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223010.1|495652_496276_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 27
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	501865	504677	2819334		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019687.1|501865_503212_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.7	6.3e-64
WP_000202189.1|503204_504677_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	6.2e-81
>prophage 28
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	512180	518751	2819334		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|512180_513518_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|513510_513741_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183375.1|513718_514600_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	26.1	8.9e-11
WP_001124985.1|515031_515484_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942211.1|515499_517179_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291535.1|517329_518751_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 29
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	525580	526987	2819334		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|525580_526987_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 30
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	531632	533117	2819334		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|531632_533117_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 31
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	538779	630820	2819334	plate,terminase,head,capsid,protease,tRNA,holin,integrase,portal,tail	Staphylococcus_phage(77.78%)	109	543938:543955	589402:589419
WP_000447733.1|538779_539667_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183427.1|539744_540251_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|540342_541074_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368657.1|541066_541609_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|541601_542339_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|542471_543197_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987769.1|543177_544929_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
543938:543955	attL	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_001793476.1|545173_546082_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_011053028.1|546233_548120_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	96.2	1.0e-112
WP_000264191.1|548162_549368_-|integrase	site-specific integrase	integrase	M1RZA8	Staphylococcus_phage	100.0	1.0e-222
WP_001166482.1|549477_550101_+	hypothetical protein	NA	B7T0F3	Staphylococcus_virus	99.5	9.8e-105
WP_000449653.1|550299_550695_-	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	99.2	1.4e-69
WP_000755718.1|550723_551158_-	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
WP_000525002.1|551175_551637_-	hypothetical protein	NA	A0A0H3U308	Staphylococcus_phage	97.4	4.3e-81
WP_001260485.1|551649_551973_-	helix-turn-helix transcriptional regulator	NA	R4WAK9	Staphylococcus_phage	99.1	4.5e-53
WP_000272860.1|552136_552385_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PED6	Staphylococcus_phage	98.8	4.8e-39
WP_001025401.1|552400_552646_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|552614_552980_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001036302.1|553034_553250_+	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	100.0	1.3e-32
WP_001124190.1|553274_553538_+	helix-turn-helix domain-containing protein	NA	A0A2I6PDM6	Staphylococcus_phage	100.0	1.1e-44
WP_001285963.1|553550_553712_+	DUF1270 family protein	NA	A0A2I6PEZ9	Staphylococcus_phage	100.0	5.0e-21
WP_000174994.1|553790_554114_+	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
WP_000985979.1|554128_554491_+	hypothetical protein	NA	A0A2I6PEM7	Staphylococcus_phage	100.0	3.7e-56
WP_000762552.1|554487_555654_+	DUF2800 domain-containing protein	NA	A0A2I6PEL9	Staphylococcus_phage	100.0	1.4e-221
WP_000645048.1|555679_556237_+	DUF2815 family protein	NA	A0A2I6PEP8	Staphylococcus_phage	100.0	1.8e-97
WP_001801657.1|556304_558257_+	DNA polymerase	NA	A0A2I6PEL4	Staphylococcus_phage	100.0	0.0e+00
WP_001164629.1|558269_558455_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_000113974.1|558454_558856_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022728.1|558855_559113_+	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
WP_000235322.1|559115_559316_+	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	98.5	4.3e-30
WP_000132192.1|559330_559573_+	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	98.8	5.6e-40
WP_001826875.1|559587_559839_+	DUF1024 family protein	NA	A0A2H4PQK1	Staphylococcus_phage	100.0	8.4e-39
WP_000028424.1|559828_560002_+	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	100.0	1.8e-24
WP_000454993.1|560002_560284_+	hypothetical protein	NA	A0A2I6PCT3	Staphylococcus_phage	100.0	1.4e-47
WP_000889679.1|560284_560446_+	hypothetical protein	NA	A0A2H4PQJ5	Staphylococcus_phage	100.0	4.9e-24
WP_001061841.1|560460_560994_+	hypothetical protein	NA	A0A2H4PQJ1	Staphylococcus_phage	100.0	2.1e-95
WP_001282074.1|561030_561276_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000195817.1|561272_561461_+	DUF1381 domain-containing protein	NA	A0A2H4PQK3	Staphylococcus_phage	100.0	1.8e-25
WP_001125015.1|561435_561636_+	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_031927234.1|561623_561791_+	transcriptional regulator	NA	A0A2I6PF16	Staphylococcus_phage	98.2	4.7e-22
WP_000265252.1|561858_562059_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884870.1|562346_564794_+	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
WP_001801650.1|564902_565001_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_001548892.1|565134_565425_+	VRR-NUC domain-containing protein	NA	A0A2I6PE31	Staphylococcus_phage	100.0	6.5e-51
WP_001793488.1|565405_566773_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000528512.1|566785_567223_+	transcriptional regulator	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
WP_000160692.1|567379_567694_+	HNH endonuclease	NA	A0A2I6PF37	Staphylococcus_phage	99.0	4.2e-56
WP_000778933.1|567821_568127_+|terminase	terminase	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000153544.1|568116_569808_+|terminase	terminase large subunit	terminase	Q4ZD20	Staphylococcus_virus	100.0	0.0e+00
WP_001100665.1|569812_571051_+|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	100.0	1.2e-234
WP_000061866.1|571034_571808_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
WP_001142734.1|571819_572983_+|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
WP_000050973.1|573051_573330_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395498.1|573341_573674_+	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
WP_000110023.1|573670_574072_+	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
WP_001023806.1|574072_574468_+	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
WP_000807536.1|574502_575144_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_000169128.1|575235_575691_+	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000589166.1|575748_576090_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.5e-54
WP_000438833.1|576140_576299_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_001003441.1|576312_582513_+|tail	phage tail tape measure protein	tail	A0A2I6PF36	Staphylococcus_phage	99.5	0.0e+00
WP_001190533.1|582512_583337_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384474.1|583345_584929_+	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179858.1|584928_585219_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000429551.1|585234_587145_+	minor structural protein	NA	A0A2I6PF35	Staphylococcus_phage	100.0	0.0e+00
WP_000067140.1|587144_588611_+|plate	BppU family phage baseplate upper protein	plate	A7TWK6	Staphylococcus_phage	100.0	7.6e-257
WP_001166599.1|588610_589000_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|588992_589157_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|589202_589502_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
589402:589419	attR	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_000339141.1|589637_589940_+|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000909207.1|589950_591405_+	CHAP domain-containing protein	NA	M1TB12	Staphylococcus_phage	100.0	3.4e-289
WP_000239545.1|591794_592733_+	Panton-Valentine bi-component leukocidin subunit S	NA	A0A2I6PER8	Staphylococcus_phage	100.0	3.7e-180
WP_024937002.1|592728_593712_+	Panton-Valentine bi-component leukocidin subunit F	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	4.0e-185
WP_061390271.1|593894_594146_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.4e-25
WP_000476866.1|594236_595142_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476881.1|595199_596117_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476340.1|596173_597088_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186912.1|597497_598043_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|598148_598397_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|598504_599458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902120.1|599447_600827_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
WP_000069296.1|600979_602440_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_031867547.1|602564_602681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174260.1|602841_603828_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681769.1|603942_604911_-	asparaginase	NA	NA	NA	NA	NA
WP_000644391.1|604987_605647_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000133954.1|606344_607520_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|607741_609052_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161738.1|609068_610067_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|610237_610510_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|610940_611513_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|611515_612241_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_072472612.1|612257_613202_+	heptaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442479.1|613293_613743_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	44.5	8.3e-29
WP_000789519.1|613952_614153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269923.1|614539_615706_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	2.0e-34
WP_000776341.1|615731_616796_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000245895.1|616805_618104_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389510.1|618110_619355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000005212.1|619368_619944_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000154680.1|619933_620521_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_031774998.1|620592_621273_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|621608_621926_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690035.1|622167_623310_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361543.1|623314_624517_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000049923.1|624503_625475_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525081.1|625498_628192_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858792.1|628513_629806_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.1	1.9e-54
WP_000362218.1|630133_630820_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 32
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	634558	635236	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|634558_635236_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 33
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	644932	645811	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_001133022.1|644932_645811_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 34
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	682552	691942	2819334		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|682552_683257_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|683501_683696_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|683707_683959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404645.1|683996_685121_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|685136_685574_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|685997_686954_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175752.1|687153_687633_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	78.6	1.1e-71
WP_000166059.1|687647_688487_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000159902.1|688572_689106_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913315.1|689098_689527_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473657.1|689538_690039_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|690038_690260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342126.1|690451_691942_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
>prophage 35
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	696138	698150	2819334		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|696138_696798_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|696794_698150_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 36
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	704315	705107	2819334		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|704315_705107_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 37
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	709587	714618	2819334	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138403.1|709587_710724_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.5	9.7e-34
WP_001788788.1|710755_711385_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
WP_001215907.1|711403_711673_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|711835_712144_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|712314_712515_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|712711_713113_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|713352_714618_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 38
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	722470	724072	2819334		Klosneuvirus(100.0%)	1	NA	NA
WP_000942300.1|722470_724072_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 39
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	729162	732615	2819334		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|729162_730014_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|730020_730662_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077576.1|730800_732615_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.0	1.5e-153
>prophage 40
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	736029	736731	2819334		Tupanvirus(100.0%)	1	NA	NA
WP_000571247.1|736029_736731_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	28.8	1.2e-13
>prophage 41
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	744781	747136	2819334		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000154116.1|744781_745564_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.3	1.2e-27
WP_000173833.1|745565_746564_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604817.1|746569_747136_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 42
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	751453	752716	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|751453_752716_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 43
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	762375	766769	2819334		Bacillus_phage(50.0%)	2	NA	NA
WP_001289561.1|762375_764778_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	1.4e-93
WP_001548666.1|764777_766769_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	8.0e-116
>prophage 44
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	772646	774293	2819334		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|772646_774293_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 45
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	777962	779084	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691284.1|777962_779084_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 46
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	783233	788889	2819334		Phage_Wrath(25.0%)	7	NA	NA
WP_001208760.1|783233_783857_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	3.5e-17
WP_000380729.1|784236_785100_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	5.3e-16
WP_031835013.1|785173_785278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688122.1|785274_786252_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.7	8.0e-186
WP_001085655.1|786408_786678_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|787131_787281_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|787371_788889_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 47
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	799025	803301	2819334		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|799025_799559_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|799697_799886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|799998_800601_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670300.1|800597_801689_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603969.1|801692_802424_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|802392_803301_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 48
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	812340	813947	2819334		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001002340.1|812340_812547_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_075111596.1|812843_813062_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	73.1	6.4e-19
WP_001793526.1|813749_813947_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
>prophage 49
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	819027	819504	2819334		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|819027_819504_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 50
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	825446	831928	2819334		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|825446_826265_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|826739_827282_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516264.1|827287_829297_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.7	2.8e-60
WP_000073352.1|829309_831928_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 51
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	841342	842386	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|841342_842386_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 52
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	846587	852131	2819334		Bacillus_virus(33.33%)	4	NA	NA
WP_000664780.1|846587_847874_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	27.9	6.7e-15
WP_000089951.1|847873_849139_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	4.5e-40
WP_001293304.1|849169_849883_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_072384908.1|849887_852131_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	6.9e-84
>prophage 53
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	857270	869084	2819334	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|857270_858242_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282306.1|858256_859174_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|859343_859694_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043632.1|860079_862197_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	1.8e-25
WP_000020853.1|862201_862519_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|862515_862800_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097457.1|862820_863996_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036631.1|864016_864484_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001820550.1|864773_869084_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 54
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	873357	874128	2819334		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473705.1|873357_874128_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 55
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	878902	892573	2819334	tRNA,protease	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|878902_880306_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|880371_880917_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015602.1|880913_881810_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	7.9e-31
WP_000195254.1|882226_883534_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|883689_885765_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593192.1|885938_886811_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672867.1|886983_888228_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|888255_889374_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110251.1|889600_890509_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|890530_891697_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176387.1|891805_892573_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 56
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	906296	908545	2819334		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|906296_907028_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|907143_907377_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|907810_908545_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 57
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	918915	920910	2819334		Moumouvirus(100.0%)	1	NA	NA
WP_000579564.1|918915_920910_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 58
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	924057	924993	2819334	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161286.1|924057_924993_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 59
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	930002	932259	2819334		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|930002_931202_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|931417_931636_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368227.1|931635_932259_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.7	3.6e-22
>prophage 60
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	935573	936185	2819334		Pandoravirus(100.0%)	1	NA	NA
WP_001040246.1|935573_936185_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	3.6e-27
>prophage 61
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	940152	944763	2819334		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|940152_941253_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|941254_942529_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|942546_943428_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|943455_944763_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 62
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	949255	952009	2819334	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384677.1|949255_952009_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	8.0e-90
>prophage 63
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	971599	971788	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245802.1|971599_971788_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	86.9	3.8e-20
>prophage 64
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	980871	982831	2819334		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|980871_981096_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|981052_981199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857485.1|981871_982831_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	1.3e-34
>prophage 65
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	996927	1001485	2819334		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|996927_997242_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249273.1|997414_999763_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.3	1.1e-15
WP_000161942.1|999772_1001485_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	8.9e-15
>prophage 66
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1006290	1007349	2819334	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|1006290_1007349_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 67
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1019296	1022204	2819334		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|1019296_1019779_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|1019780_1020323_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|1020392_1020782_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|1020784_1021039_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757597.1|1021277_1022204_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.7e-12
>prophage 68
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1033721	1035569	2819334		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|1033721_1035569_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 69
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1043704	1052537	2819334		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|1043704_1044799_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|1044811_1045351_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|1045494_1045770_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|1045937_1047344_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863440.1|1047347_1048640_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|1048730_1049708_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|1049711_1050824_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668339.1|1050994_1051621_-	cell-wall-binding lipoprotein	NA	NA	NA	NA	NA
WP_000957036.1|1051985_1052537_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.6e-13
>prophage 70
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1058652	1063032	2819334		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|1058652_1058886_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040052.1|1059122_1060841_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|1060843_1061110_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|1061263_1061806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685063.1|1061859_1063032_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 71
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1066148	1080908	2819334		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921973.1|1066148_1067549_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273252.1|1067541_1068348_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101474.1|1068612_1069860_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709290.1|1069881_1071360_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.5	9.2e-77
WP_000238663.1|1071374_1071941_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	1.0e-28
WP_000030823.1|1071943_1072972_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000483713.1|1072964_1074449_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032727.1|1074427_1076617_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000666799.1|1076609_1077281_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1077282_1077546_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1077545_1078250_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000009495.1|1078253_1079378_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1079364_1079847_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225837.1|1080047_1080908_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.2	5.3e-40
>prophage 72
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1091282	1095053	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074542.1|1091282_1095053_+	bifunctional autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	37.9	8.7e-55
>prophage 73
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1098719	1099703	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676533.1|1098719_1099703_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.0e-16
>prophage 74
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1108007	1108298	2819334		Enterococcus_phage(100.0%)	1	NA	NA
WP_001788574.1|1108007_1108298_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
>prophage 75
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1112923	1113565	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571184.1|1112923_1113565_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
>prophage 76
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1123699	1128910	2819334	protease	Pithovirus(33.33%)	3	NA	NA
WP_001793567.1|1123699_1126024_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928416.1|1126242_1127046_-	TerC family protein	NA	S5MAL1	Bacillus_phage	41.0	4.2e-31
WP_001049957.1|1127347_1128910_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
>prophage 77
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1147840	1149649	2819334		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1147840_1149649_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 78
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1155462	1157432	2819334		Bacillus_virus(100.0%)	2	NA	NA
WP_000427760.1|1155462_1156443_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.1	2.7e-16
WP_001067042.1|1156445_1157432_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.8e-15
>prophage 79
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1161083	1163097	2819334		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786736.1|1161083_1162025_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1162014_1163097_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 80
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1171691	1178501	2819334		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_000619360.1|1171691_1172837_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047066.1|1172946_1173816_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353966.1|1173874_1176484_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.5	1.9e-117
WP_001044230.1|1176686_1178501_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 81
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1183620	1187274	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000154928.1|1183620_1187274_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	5.9e-24
>prophage 82
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1197428	1204473	2819334		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1197428_1198358_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1198747_1199992_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1200100_1201291_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838033.1|1201598_1202726_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1203087_1203465_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1203879_1204473_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 83
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1214393	1218021	2819334		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009697.1|1214393_1215869_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	6.9e-48
WP_000046075.1|1215999_1217208_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001143497.1|1217661_1218021_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.1e-14
>prophage 84
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1222064	1224733	2819334		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1222064_1223279_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129653.1|1223275_1224733_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.3	4.4e-39
>prophage 85
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1237816	1241339	2819334		environmental_halophage(50.0%)	3	NA	NA
WP_001006454.1|1237816_1239067_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.4e-110
WP_000205570.1|1239172_1240480_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1240577_1241339_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 86
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1244825	1245851	2819334		Bacillus_virus(100.0%)	1	NA	NA
WP_000571218.1|1244825_1245851_-	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	3.9e-26
>prophage 87
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1249111	1254288	2819334		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589549.1|1249111_1249468_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147953.1|1249611_1249932_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	35.1	1.2e-05
WP_000422910.1|1250081_1250621_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150012.1|1250703_1251420_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000974464.1|1251567_1251990_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1252388_1252883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255544.1|1253037_1253655_+	amino acid transporter	NA	NA	NA	NA	NA
WP_016187137.1|1253727_1254288_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	3.8e-31
>prophage 88
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1257690	1258934	2819334		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1257690_1257891_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_001793574.1|1258247_1258934_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	3.8e-33
>prophage 89
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1268141	1290320	2819334	capsid,terminase,integrase	Staphylococcus_phage(56.25%)	25	1271406:1271423	1284353:1284370
WP_000757407.1|1268141_1268870_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_000746597.1|1269608_1270331_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	34.9	1.6e-26
WP_001043551.1|1270497_1271298_-	staphylococcal enterotoxin type C2	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.8	8.0e-51
1271406:1271423	attL	ATTTAATGATTTCACGTT	NA	NA	NA	NA
WP_001035625.1|1272086_1272641_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	76.1	5.2e-73
WP_000499373.1|1272940_1273501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000122406.1|1273516_1274494_-	DUF4868 domain-containing protein	NA	NA	NA	NA	NA
WP_100292232.1|1274702_1274858_-|terminase	terminase	terminase	A0A1W6JQF0	Staphylococcus_phage	94.0	5.3e-20
WP_000253086.1|1274854_1275346_-	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	41.1	7.9e-25
WP_000657544.1|1275527_1276586_-|capsid	phage capsid protein	capsid	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
WP_000884055.1|1276572_1276779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001081425.1|1277003_1277348_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	2.7e-40
WP_000985236.1|1278020_1280393_-	primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	41.2	2.7e-147
WP_001103961.1|1280484_1280784_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
WP_001058500.1|1280784_1281009_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	60.3	2.9e-14
WP_000773732.1|1281001_1281148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000163543.1|1281159_1281378_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000583241.1|1281529_1282267_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	31.2	1.2e-05
WP_025174195.1|1282281_1283388_+|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	43.0	2.0e-76
WP_000586155.1|1283399_1283615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085185.1|1284170_1284635_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
1284353:1284370	attR	ATTTAATGATTTCACGTT	NA	NA	NA	NA
WP_001050053.1|1284656_1287029_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.9	2.3e-93
WP_001165958.1|1287062_1287803_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_000556760.1|1287918_1288152_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1288218_1288677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1289015_1290320_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 90
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1299376	1305195	2819334		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1299376_1299964_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1300536_1301481_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1301591_1302587_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1302583_1303495_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1304259_1305195_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 91
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1309585	1312432	2819334		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662681.1|1309585_1312432_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 92
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1315750	1316590	2819334		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753321.1|1315750_1316590_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 93
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1322668	1328381	2819334		Streptococcus_phage(66.67%)	5	NA	NA
WP_001793589.1|1322668_1323751_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.5	2.0e-44
WP_000686342.1|1324114_1324981_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1325124_1325766_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258151.1|1325937_1326993_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1327310_1328381_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 94
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1337656	1361220	2819334		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1337656_1338418_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245573.1|1338414_1339371_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1339357_1340329_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1340367_1340523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1341036_1342008_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|1342125_1344231_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1344193_1344592_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|1345392_1346259_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1346278_1346779_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1347119_1348625_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|1348702_1348804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429008.1|1348893_1349811_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.8e-07
WP_000197271.1|1350491_1351034_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663032.1|1351328_1352387_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	1.8e-21
WP_000180991.1|1352626_1354141_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589264.1|1354133_1355111_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	5.4e-25
WP_000983677.1|1355332_1357114_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525108.1|1357125_1359009_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1359279_1361220_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 95
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1364359	1374206	2819334		Pandoravirus(12.5%)	12	NA	NA
WP_001217797.1|1364359_1365511_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
WP_000604515.1|1365494_1366088_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_000446724.1|1366438_1367107_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1367108_1367528_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1367531_1368245_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|1368343_1368928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1369207_1369648_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1369990_1370464_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1370438_1371125_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1371124_1372180_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702781.1|1372251_1373235_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.3	1.5e-62
WP_000931239.1|1373366_1374206_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.9	2.5e-55
>prophage 96
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1385817	1387191	2819334		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952044.1|1385817_1387191_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	34.3	6.0e-46
>prophage 97
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1392168	1398448	2819334		Bacillus_phage(33.33%)	6	NA	NA
WP_000857620.1|1392168_1393842_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.4	3.4e-11
WP_000737158.1|1393838_1395470_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	5.2e-12
WP_000469892.1|1395688_1396564_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1396735_1397419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148828.1|1397421_1397880_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820892.1|1397881_1398448_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	6.1e-21
>prophage 98
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1405515	1405989	2819334		Pandoravirus(100.0%)	1	NA	NA
WP_000833481.1|1405515_1405989_-	cupin	NA	A0A291AU44	Pandoravirus	39.4	2.1e-14
>prophage 99
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1411251	1412049	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000731641.1|1411251_1412049_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	9.3e-07
>prophage 100
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1416880	1417642	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1416880_1417642_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 101
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1422016	1423060	2819334		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030771.1|1422016_1423060_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 102
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1429583	1437566	2819334		Planktothrix_phage(20.0%)	7	NA	NA
WP_001080809.1|1429583_1430381_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
WP_001044667.1|1430663_1431497_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.4	9.9e-44
WP_001788321.1|1431674_1431767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000479284.1|1432021_1433251_-	nucleoside permease	NA	NA	NA	NA	NA
WP_000817956.1|1433607_1435335_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793046.1|1435755_1437051_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1437167_1437566_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 103
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1444500	1445244	2819334		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1444500_1445244_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 104
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1456529	1457090	2819334	integrase	Streptococcus_phage(100.0%)	1	1450683:1450697	1460678:1460692
1450683:1450697	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1456529_1457090_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1456529_1457090_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1460678:1460692	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 105
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1470097	1473451	2819334		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1470097_1471108_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001788287.1|1471606_1472128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180230.1|1472155_1473451_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	2.1e-24
>prophage 106
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1487002	1488325	2819334		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860572.1|1487002_1488325_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.6	3.4e-107
>prophage 107
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1499629	1500286	2819334		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1499629_1500286_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 108
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1503927	1507248	2819334		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1503927_1505304_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347058.1|1505847_1507248_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	8.0e-54
>prophage 109
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1530498	1531161	2819334		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1530498_1531161_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 110
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1537741	1538929	2819334		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1537741_1538929_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 111
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1541957	1552911	2819334		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1541957_1544039_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1544161_1544632_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1544697_1545111_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1545208_1545463_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001788197.1|1545599_1549196_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1549359_1552911_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 112
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1556594	1561377	2819334	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1556594_1557143_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1557155_1557338_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1557393_1557537_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872877.1|1557651_1558221_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664738.1|1558301_1558826_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1558825_1559572_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1559579_1559984_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631973.1|1559976_1561377_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	2.5e-55
>prophage 113
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1567387	1569844	2819334	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897129.1|1567387_1569844_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.0	1.5e-132
>prophage 114
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1588851	1599123	2819334	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288199.1|1588851_1590339_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1590391_1590484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613716.1|1590877_1591354_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1591350_1591716_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167924.1|1591693_1592497_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.3	1.3e-21
WP_000057594.1|1592712_1593645_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148605.1|1593823_1594705_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1594933_1597027_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1597283_1597823_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176724.1|1597827_1599123_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	2.4e-12
>prophage 115
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1608379	1610844	2819334		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1608379_1609345_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252529.1|1609491_1610844_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 116
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1616728	1619826	2819334	tRNA	Hokovirus(50.0%)	2	NA	NA
WP_001051130.1|1616728_1618702_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	32.8	6.5e-94
WP_000279926.1|1618986_1619826_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 117
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1623732	1624350	2819334		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272131.1|1623732_1624350_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	1.2e-46
>prophage 118
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1633422	1635120	2819334		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109036.1|1633422_1635120_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.0	9.7e-54
>prophage 119
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1651770	1658011	2819334		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1651770_1652775_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825528.1|1653106_1653949_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467991.1|1653985_1654645_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569289.1|1654648_1655674_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	3.1e-31
WP_001036667.1|1655970_1657113_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|1657105_1658011_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 120
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1679974	1682783	2819334		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072566.1|1679974_1681234_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	63.7	4.5e-133
WP_000028602.1|1681226_1682783_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	97.3	2.4e-285
>prophage 121
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1695817	1696507	2819334		Moraxella_phage(100.0%)	1	NA	NA
WP_000416468.1|1695817_1696507_-	NYN domain-containing protein	NA	A0A0R6PGY5	Moraxella_phage	43.4	1.4e-40
>prophage 122
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1702902	1703235	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000212549.1|1702902_1703235_-	hypothetical protein	NA	A0A0N9SJ02	Staphylococcus_phage	54.8	1.7e-10
>prophage 123
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1707297	1710330	2819334		Hokovirus(50.0%)	2	NA	NA
WP_000424968.1|1707297_1708839_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264068.1|1708863_1710330_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	1.2e-95
>prophage 124
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1719487	1721011	2819334		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930514.1|1719487_1721011_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 125
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1730649	1736983	2819334		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1730649_1731153_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1731173_1731470_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052483.1|1731713_1731905_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001218732.1|1731990_1733088_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157345.1|1733099_1733303_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_001077602.1|1733332_1734214_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001566903.1|1734370_1735216_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655703.1|1735879_1736983_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	29.0	1.3e-11
>prophage 126
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1746924	1747767	2819334		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209553.1|1746924_1747767_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.2	1.1e-10
>prophage 127
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1768869	1771604	2819334		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280800.1|1768869_1769892_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191947.1|1769869_1770814_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449060.1|1770803_1771604_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.9	8.9e-42
>prophage 128
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1789840	1790518	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911019.1|1789840_1790518_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	9.2e-32
>prophage 129
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1807488	1811928	2819334		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549274.1|1807488_1811928_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	24.3	8.2e-28
>prophage 130
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1822533	1824195	2819334		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570075.1|1822533_1823193_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736792.1|1823244_1824195_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 131
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1833055	1842790	2819334	holin	Pandoravirus(25.0%)	9	NA	NA
WP_000164010.1|1833055_1834492_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	2.4e-29
WP_000066930.1|1834507_1835299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000922317.1|1835447_1836152_+	GntR family transcriptional regulator	NA	A0A1X9I5H2	Streptococcus_phage	40.9	5.3e-06
WP_000607067.1|1836259_1836961_-|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
WP_001793213.1|1836953_1837397_-|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
WP_000645456.1|1837509_1838250_-	DNA-binding response regulator	NA	NA	NA	NA	NA
WP_000925394.1|1838252_1839992_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	1.5e-62
WP_000608831.1|1840250_1840925_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975365.1|1841068_1842790_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 132
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1852715	1853759	2819334		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|1852715_1853759_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 133
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1860972	1862502	2819334		Vibrio_phage(100.0%)	1	NA	NA
WP_000838204.1|1860972_1862502_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	52.0	5.3e-11
>prophage 134
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1871377	1872883	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008395.1|1871377_1872883_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 135
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1883946	1889305	2819334		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1883946_1886196_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837105.1|1886783_1887752_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127997.1|1887748_1889305_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 136
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1899515	1901574	2819334		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818914.1|1899515_1900613_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166919.1|1900995_1901574_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.4	9.7e-14
>prophage 137
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1910124	1913312	2819334		Planktothrix_phage(33.33%)	3	NA	NA
WP_000067350.1|1910124_1911717_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.9	3.0e-17
WP_000794565.1|1912226_1912424_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000960712.1|1912589_1913312_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 138
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1917183	1917864	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|1917183_1917864_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 139
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1934310	1935495	2819334		Klosneuvirus(100.0%)	1	NA	NA
WP_001084436.1|1934310_1935495_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.2	9.2e-35
>prophage 140
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1940331	1950615	2819334		Tupanvirus(50.0%)	3	NA	NA
WP_000605278.1|1940331_1947507_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	29.1	1.1e-66
WP_000826862.1|1947953_1949204_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706137.1|1949589_1950615_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.9	2.9e-29
>prophage 141
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1954154	1957384	2819334		Bacillus_virus(50.0%)	4	NA	NA
WP_000590847.1|1954154_1954895_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.6	5.0e-39
WP_000171919.1|1955236_1955749_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1955926_1956130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013481.1|1956424_1957384_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 142
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1960724	1963209	2819334		Catovirus(50.0%)	2	NA	NA
WP_000723452.1|1960724_1961870_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.1	3.2e-24
WP_000779494.1|1961946_1963209_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.8	5.0e-23
>prophage 143
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1970226	1976791	2819334		Catovirus(50.0%)	6	NA	NA
WP_000413169.1|1970226_1971351_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	8.7e-128
WP_001028293.1|1971354_1972464_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1972476_1973505_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940793.1|1973494_1975318_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565297.1|1975337_1976102_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037328.1|1976104_1976791_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 144
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1988169	1988943	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1988169_1988943_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 145
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	1996977	1997577	2819334		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1996977_1997577_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 146
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2002514	2003495	2819334		Catovirus(100.0%)	1	NA	NA
WP_001793242.1|2002514_2003495_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
>prophage 147
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2006865	2008068	2819334		Tupanvirus(100.0%)	1	NA	NA
WP_001223697.1|2006865_2008068_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.0e-09
>prophage 148
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2016334	2020544	2819334		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|2016334_2017315_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|2017545_2018538_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924993.1|2018553_2019549_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136643.1|2019545_2020544_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.9	9.8e-14
>prophage 149
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2056704	2057772	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816129.1|2056704_2057772_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.5	3.5e-09
>prophage 150
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2060843	2062852	2819334	transposase	Staphylococcus_phage(66.67%)	3	NA	NA
WP_000608674.1|2060843_2061569_-	enterotoxin	NA	A0EX09	Staphylococcus_phage	37.5	2.0e-32
WP_000251972.1|2061944_2062055_+|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	95.7	2.0e-05
WP_105255971.1|2062177_2062852_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.0	2.4e-56
>prophage 151
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2073726	2076726	2819334		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_000815641.1|2073726_2075076_+	recombinase family protein	NA	A0A2H4J388	uncultured_Caudovirales_phage	25.2	3.0e-18
WP_001186600.1|2075097_2076726_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.7	7.1e-46
>prophage 152
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2085986	2086661	2819334	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001106057.1|2085986_2086661_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 153
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2092317	2102329	2819334		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|2092317_2093118_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104167.1|2093506_2094295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060150.1|2094295_2095630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|2095622_2097449_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2097461_2098163_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095327.1|2099366_2100650_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	2.3e-68
WP_000375647.1|2100928_2102329_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 154
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2109020	2118059	2819334	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884342.1|2109020_2110307_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.0	3.5e-88
WP_000177468.1|2110685_2112200_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.2	3.4e-90
WP_000449218.1|2112525_2113338_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819084.1|2113424_2116088_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	2.7e-119
WP_000255586.1|2116124_2118059_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 155
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2128141	2134566	2819334		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|2128141_2128981_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2129297_2129651_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779136.1|2129718_2130114_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054118.1|2130373_2130943_+	helix-turn-helix domain-containing protein	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2131060_2131261_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672033.1|2131653_2131845_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143655.1|2131937_2133818_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|2133807_2134566_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 156
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2151727	2153440	2819334		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138645.1|2151727_2153440_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	2.4e-20
>prophage 157
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2159068	2160082	2819334		Faustovirus(100.0%)	1	NA	NA
WP_000639180.1|2159068_2160082_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	24.9	1.2e-06
>prophage 158
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2172532	2173225	2819334		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2172532_2173225_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 159
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2199900	2201760	2819334		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125619.1|2199900_2201760_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 160
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2227534	2229285	2819334		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143417.1|2227534_2228422_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2228529_2229285_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 161
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2232705	2233203	2819334		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2232705_2233203_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 162
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2238237	2240621	2819334		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071729.1|2238237_2240088_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	9.3e-236
WP_000173328.1|2240084_2240621_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.6	1.0e-41
>prophage 163
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2246461	2256575	2819334	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066517.1|2246461_2248171_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.2	1.9e-57
WP_000011688.1|2248448_2248661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028786.1|2248940_2249384_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|2249577_2251176_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001793296.1|2251235_2251565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130054.1|2251860_2253357_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031405.1|2253550_2254441_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237628.1|2254563_2254980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030062.1|2255237_2256575_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 164
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2285377	2289166	2819334		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751267.1|2285377_2286079_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	4.0e-38
WP_000996736.1|2286354_2286843_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2287354_2289166_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 165
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2297599	2301651	2819334		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161366.1|2297599_2298598_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	2.6e-35
WP_000076661.1|2298687_2298894_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024129.1|2299242_2301651_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	41.0	2.9e-128
>prophage 166
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2310891	2313927	2819334	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058988.1|2310891_2312997_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455993.1|2313405_2313927_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 167
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2320355	2326724	2819334		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062652.1|2320355_2322095_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	1.3e-34
WP_000473675.1|2322395_2324462_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206033.1|2324826_2325237_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240662.1|2325278_2325623_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228169.1|2325755_2326724_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	5.2e-12
>prophage 168
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2336436	2337429	2819334		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161533.1|2336436_2337429_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.3	1.4e-36
>prophage 169
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2346710	2347406	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000382903.1|2346710_2347406_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	8.8e-38
>prophage 170
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2366591	2367458	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000721337.1|2366591_2367458_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.9	3.4e-79
>prophage 171
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2375260	2380450	2819334		Streptococcus_phage(50.0%)	3	NA	NA
WP_001793319.1|2375260_2377069_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.7	9.2e-95
WP_000755946.1|2377200_2377593_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001793320.1|2377594_2380450_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	2.4e-28
>prophage 172
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2384917	2385613	2819334		Bacillus_phage(100.0%)	1	NA	NA
WP_000217458.1|2384917_2385613_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	3.3e-08
>prophage 173
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2390605	2391424	2819334		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824929.1|2390605_2391424_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	26.8	1.9e-10
>prophage 174
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2399295	2400853	2819334		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173862.1|2399295_2400111_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	3.0e-13
WP_000590515.1|2400103_2400853_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	8.1e-21
>prophage 175
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2408126	2412555	2819334		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923523.1|2408126_2408789_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	4.2e-21
WP_000072145.1|2408781_2409558_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026194.1|2409953_2411141_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700927.1|2411202_2412555_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	8.6e-13
>prophage 176
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2415947	2417174	2819334		Mycoplasma_phage(100.0%)	1	NA	NA
WP_000948991.1|2415947_2417174_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
>prophage 177
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2435532	2441765	2819334		Bacillus_phage(66.67%)	5	NA	NA
WP_001176871.1|2435532_2436675_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	9.1e-56
WP_000779360.1|2436932_2437319_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482647.1|2437452_2437560_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064815.1|2438243_2440007_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.9	8.5e-37
WP_000486494.1|2440031_2441765_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 178
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2445226	2450998	2819334		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971548.1|2445226_2446342_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	4.6e-20
WP_000286878.1|2446352_2447045_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200943.1|2447055_2447523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|2447574_2448552_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|2448553_2449501_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|2450068_2450998_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 179
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2458891	2459623	2819334		Bacillus_virus(100.0%)	1	NA	NA
WP_000615458.1|2458891_2459623_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	5.3e-25
>prophage 180
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2476271	2477831	2819334		Escherichia_phage(100.0%)	1	NA	NA
WP_000692645.1|2476271_2477831_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 181
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2499054	2500089	2819334		Bacillus_virus(100.0%)	1	NA	NA
WP_000655972.1|2499054_2500089_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 182
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2511654	2515551	2819334		Hokovirus(33.33%)	4	NA	NA
WP_000477339.1|2511654_2513028_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	1.3e-13
WP_000249497.1|2513020_2513695_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2513830_2514886_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229911.1|2514885_2515551_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.2e-36
>prophage 183
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2519290	2520499	2819334		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2519290_2520499_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 184
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2532593	2533493	2819334		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|2532593_2533493_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 185
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2546553	2547435	2819334		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000730046.1|2546553_2547435_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.6	1.7e-62
>prophage 186
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2555313	2555949	2819334		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2555313_2555949_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 187
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2569513	2573897	2819334		Staphylococcus_phage(50.0%)	4	NA	NA
WP_011447058.1|2569513_2570152_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684143.1|2570876_2572001_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	5.5e-13
WP_000417016.1|2572081_2573035_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	2.9e-31
WP_000737705.1|2573396_2573897_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 188
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2577813	2578623	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717388.1|2577813_2578623_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.4e-07
>prophage 189
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2597605	2598211	2819334		Pithovirus(100.0%)	1	NA	NA
WP_000913019.1|2597605_2598211_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	3.8e-13
>prophage 190
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2610182	2613350	2819334		Leptospira_phage(100.0%)	1	NA	NA
WP_000592298.1|2610182_2613350_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.1	5.6e-63
>prophage 191
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2636809	2638476	2819334		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389676.1|2636809_2637619_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	9.7e-20
WP_000155386.1|2637615_2638476_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 192
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2642144	2643809	2819334		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_000130138.1|2642144_2643809_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.8	2.3e-44
>prophage 193
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2648892	2651986	2819334		Staphylococcus_phage(50.0%)	5	NA	NA
WP_001015500.1|2648892_2649741_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_001793363.1|2649959_2650085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333465.1|2650346_2650955_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_001802549.1|2651047_2651209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001793364.1|2651245_2651986_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.9e-14
>prophage 194
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2658307	2659720	2819334		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|2658307_2659720_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 195
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2663687	2665250	2819334		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|2663687_2665250_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 196
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2675451	2676420	2819334		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989091.1|2675451_2676420_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.3e-15
>prophage 197
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2692306	2693215	2819334		Klosneuvirus(100.0%)	1	NA	NA
WP_000167873.1|2692306_2693215_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 198
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2710577	2713397	2819334		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334465.1|2710577_2712383_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
WP_000908178.1|2712614_2713397_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.1	1.3e-08
>prophage 199
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2724582	2728416	2819334		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2724582_2725026_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2725146_2725857_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_000555148.1|2726171_2726834_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242310.1|2727114_2728416_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	59.0	4.7e-133
>prophage 200
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2736354	2737965	2819334		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2736354_2737965_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 201
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2745768	2753518	2819334		Bacillus_virus(25.0%)	9	NA	NA
WP_000273356.1|2745768_2746368_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2746368_2747445_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248733.1|2747431_2748268_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_072399444.1|2748300_2749398_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.8	7.9e-41
WP_000697334.1|2749394_2749814_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654185.1|2749920_2750445_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2750471_2751710_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2751737_2752367_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2752390_2753518_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 202
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2763920	2764316	2819334		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932692.1|2763920_2764316_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	37.6	1.9e-13
>prophage 203
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2770425	2771073	2819334		Tunisvirus(100.0%)	1	NA	NA
WP_001187628.1|2770425_2771073_-	HD domain-containing protein	NA	V9SGZ2	Tunisvirus	27.1	1.0e-08
>prophage 204
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2778272	2779793	2819334		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2778272_2779793_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 205
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2785480	2787508	2819334		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546599.1|2785480_2787508_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.4	3.3e-24
>prophage 206
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2792658	2796041	2819334		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2792658_2793021_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390829.1|2793368_2794370_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2794488_2794815_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_072399441.1|2794786_2795296_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041108.1|2795270_2796041_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 207
NZ_CP026073	Staphylococcus aureus strain FDAARGOS_42 chromosome, complete genome	2819334	2810003	2814727	2819334		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094582.1|2810003_2811533_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_000214552.1|2811562_2812567_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2812703_2812958_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047810.1|2812957_2814727_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	5.3e-63
