The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	209612	217432	2697471		Hokovirus(16.67%)	10	NA	NA
WP_000244412.1|209612_210668_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000149344.1|210667_211354_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|211328_211802_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|212143_212584_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|212863_213448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|213546_214260_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|214263_214683_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|214684_215353_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|215703_216297_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217785.1|216280_217432_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 2
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	229404	244135	2697471		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|229404_230463_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197271.1|230813_231356_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429014.1|231979_232897_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_001790641.1|232987_233089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|233166_234672_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|235012_235513_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|235532_236399_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|237199_237598_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|237560_239666_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|239783_240755_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|241268_241424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|241462_242434_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245578.1|242420_243377_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|243373_244135_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	488540	497013	2697471		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|488540_489023_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010412.1|489009_490134_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|490137_490842_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|490841_491105_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|491106_491778_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|491770_493960_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|493938_495423_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030812.1|495415_496444_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238664.1|496446_497013_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 4
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	1032497	1040809	2697471	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1032497_1033283_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1033408_1034299_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|1034308_1035655_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683931.1|1035768_1036869_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1036871_1037549_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1037679_1038786_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217261.1|1039009_1040809_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 5
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	1109947	1118990	2697471	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1109947_1110466_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594993.1|1110487_1112761_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000749795.1|1112963_1115243_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1115517_1115778_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1115796_1116936_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019172.1|1116958_1117984_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1117985_1118990_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 6
NZ_CP026068	Staphylococcus aureus strain FDAARGOS_24 chromosome, complete genome	2697471	1244758	1326246	2697471	protease,transposase,tRNA	Staphylococcus_phage(93.44%)	77	NA	NA
WP_001050546.1|1244758_1251319_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	3.4e-304
WP_000836465.1|1251661_1251973_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001108732.1|1251994_1254409_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025061.1|1254699_1255881_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1255990_1256944_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1256940_1257504_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1257623_1258025_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1259603_1260431_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1260433_1260553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1260664_1261666_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1261787_1262252_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|1262264_1263446_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|1263456_1264089_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000384181.1|1264095_1265127_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
WP_001261681.1|1265619_1267122_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221179.1|1267644_1267959_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_000989123.1|1267958_1269251_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	1.9e-227
WP_000163235.1|1269268_1269664_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1269958_1270813_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1271088_1271313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671063.1|1271511_1271982_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	3.3e-81
WP_001153742.1|1272094_1272538_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|1272524_1272968_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|1273263_1273899_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1274338_1275052_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1275311_1275614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1275869_1276235_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|1276231_1276585_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|1278668_1279502_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|1279713_1280622_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000933822.1|1280746_1281940_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|1282310_1283903_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_103149850.1|1284038_1284524_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	34.7	1.1e-18
WP_002868962.1|1284898_1285645_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|1285649_1286123_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1286188_1286446_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|1286442_1287444_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|1287448_1288927_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|1289085_1289541_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_001795535.1|1289843_1290494_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_000070653.1|1290574_1291570_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_000669046.1|1291645_1292272_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|1292312_1292657_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000414205.1|1292754_1293306_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|1293523_1294165_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|1294278_1294464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|1294465_1294642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070812.1|1294652_1295036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|1295639_1295783_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|1295985_1296081_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|1296203_1296305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002868972.1|1296652_1297012_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000831218.1|1297549_1301662_-	SMEK domain-containing protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_000072624.1|1302511_1303711_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	100.0	8.5e-230
WP_073418824.1|1303703_1305443_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.6	1.5e-288
WP_001791797.1|1305423_1305558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|1305622_1306342_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|1306492_1307209_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_011447030.1|1307310_1307418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1307366_1308086_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038867.1|1308206_1308926_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001039447.1|1308983_1309706_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001039435.1|1309830_1310538_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001092763.1|1311501_1312068_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|1312541_1313240_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1313236_1313998_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1313994_1314687_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1314709_1316083_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1316092_1316611_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|1316626_1317871_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001092605.1|1317863_1320857_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000416756.1|1320921_1321065_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416759.1|1321801_1321945_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|1322186_1323170_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000878802.1|1323171_1324092_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	2.3e-174
WP_001790220.1|1324905_1325445_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000206350.1|1325457_1326246_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
