The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	159117	168160	2834575	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|159117_159636_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|159657_161931_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|162133_164413_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|164687_164948_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|164966_166106_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|166128_167154_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|167155_168160_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 2
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	291591	348901	2834575	protease,tRNA	Staphylococcus_phage(95.35%)	54	NA	NA
WP_016170631.1|291591_298152_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|298477_298789_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_016170632.1|298810_301228_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|301515_302697_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|302806_303760_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|303756_304320_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|304442_304844_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|305415_306243_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|306245_306365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|306476_307478_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|307599_308064_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|308076_309258_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|309268_309901_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000077358.1|309907_310951_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_001261668.1|311431_312934_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|313456_313771_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|313770_315063_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|315149_316004_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|316279_316504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|316702_317173_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|317285_317729_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|317715_318159_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|318454_319090_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|319529_320243_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|320502_320805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|321060_321426_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|321422_321776_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|323378_324212_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|324423_325332_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|325453_326650_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|327021_328614_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|328991_329738_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|329742_330216_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|330281_330539_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_016170739.1|330535_331537_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.0	2.6e-184
WP_000348364.1|331541_333020_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|333178_333634_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|333936_334587_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|334667_335663_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_016170738.1|335737_336364_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.3	2.0e-73
WP_000627540.1|336404_336746_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|336846_337419_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|338773_338869_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|338991_339093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|340168_341398_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_000028669.1|341390_342947_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_001791797.1|343110_343245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|343307_344027_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|344128_344236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|344184_344904_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_023604884.1|345024_345744_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.3	6.6e-129
WP_001039454.1|345801_346524_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|346648_347356_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_016170789.1|348319_348901_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.2	2.8e-53
>prophage 3
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	444329	544105	2834575	tail,transposase,protease,portal,holin,capsid,terminase,integrase,head,tRNA	Staphylococcus_phage(85.37%)	122	443665:443689	553241:553265
443665:443689	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000545370.1|444329_445757_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027917.1|445769_447227_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|447228_447531_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|447897_449436_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|449524_450724_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|450736_452740_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|452743_454936_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_047211503.1|454932_455625_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|455796_456099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|456207_457503_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|458362_459529_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|459559_459886_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|460177_460351_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|460331_460934_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|461204_462026_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_023604893.1|462018_463488_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|463671_464748_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|464767_465562_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|465633_465741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|465751_467314_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_047211504.1|467518_468616_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.3	1.3e-46
WP_000149686.1|468984_469545_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|469597_470527_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|470719_470893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|470944_472324_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|472443_473472_-	lactonase family protein	NA	NA	NA	NA	NA
WP_001807993.1|473741_473879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001284658.1|473930_474311_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_001096367.1|474300_476058_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
WP_000733622.1|476164_477010_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.9	4.4e-31
WP_000612779.1|477323_477734_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	53.5	3.1e-30
WP_000410574.1|479150_479516_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000026850.1|479524_481588_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000706213.1|481590_482703_-|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	31.6	1.7e-11
WP_000267034.1|483764_483938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|484388_485429_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|485485_486328_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|486324_486882_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|486941_487466_-	membrane protein	NA	NA	NA	NA	NA
WP_016170608.1|487586_488150_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|488215_488956_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|488955_489828_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|489824_490505_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|490505_491402_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|491398_491779_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|492036_492213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|492455_492554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|492753_494040_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|494318_494609_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001558588.1|494619_496053_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669789.1|497010_497190_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|497500_497761_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|497813_498164_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000727645.1|498846_499296_+	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000920041.1|500373_500865_-	staphylokinase	NA	A7TWR8	Staphylococcus_phage	100.0	8.0e-86
WP_000861038.1|501055_501811_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|501822_502077_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|502128_502236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072357969.1|502288_502465_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	96.6	6.5e-22
WP_000340977.1|502607_502982_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262620.1|503037_503325_-	hypothetical protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
WP_001000058.1|503370_503523_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_016170804.1|503515_507298_-	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	99.8	0.0e+00
WP_000567408.1|507313_508798_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_016170803.1|508794_513324_-|tail	phage tail tape measure protein	tail	W5R8I2	Staphylococcus_phage	95.0	0.0e+00
WP_001837493.1|513380_513518_-	hypothetical protein	NA	A0A068A227	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|513568_513919_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|513968_514193_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|514234_514879_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|514879_515287_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|515283_515688_-	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|515684_516047_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|516030_516315_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|516304_516589_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|516608_517754_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|517777_518515_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025272.1|518498_519686_-|portal	phage portal protein	portal	G4KNQ1	Staphylococcus_phage	100.0	4.6e-220
WP_016170799.1|519701_521363_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	98.6	0.0e+00
WP_000402904.1|521359_521704_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|521833_522133_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|522364_522781_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|522808_523009_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|523008_523158_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000592202.1|523154_523541_-	hypothetical protein	NA	A0A1X9IGZ2	Staphylococcus_phage	100.0	3.0e-64
WP_000608275.1|523533_523770_-	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	100.0	2.8e-36
WP_000141180.1|523762_523966_-	hypothetical protein	NA	A0A2I6PEQ8	Staphylococcus_phage	100.0	3.4e-30
WP_000195794.1|523962_524169_-	DUF1381 domain-containing protein	NA	A0A2I6PEM9	Staphylococcus_phage	100.0	1.6e-19
WP_023604907.1|524205_524739_-	dUTP diphosphatase	NA	A0A2I6PEN6	Staphylococcus_phage	98.3	3.3e-93
WP_000889682.1|524753_524915_-	hypothetical protein	NA	W5R9K6	Staphylococcus_phage	100.0	1.4e-23
WP_000028424.1|525197_525371_-	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	100.0	1.8e-24
WP_001065046.1|525360_525612_-	DUF1024 family protein	NA	G4KNP4	Staphylococcus_phage	96.4	4.1e-38
WP_025176279.1|525604_525955_-	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	90.0	2.2e-45
WP_023604909.1|525963_526206_-	hypothetical protein	NA	A0A1P8L6E3	Staphylococcus_phage	97.5	1.1e-40
WP_023604910.1|526209_526578_-	hypothetical protein	NA	A0A0H4J337	Staphylococcus_phage	98.4	6.3e-51
WP_000338528.1|527004_527223_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_025176251.1|527229_528099_-	DnaD domain protein	NA	A0EWX4	Staphylococcus_phage	96.6	5.9e-132
WP_000610649.1|528128_528599_-	single-stranded DNA-binding protein	NA	S4V682	Staphylococcus_phage	96.2	3.1e-79
WP_077517322.1|528599_529217_-	MBL fold metallo-hydrolase	NA	A0A1W6JPL3	Staphylococcus_phage	99.4	3.5e-86
WP_000138475.1|529297_530218_-	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_023604913.1|530219_532163_-	AAA family ATPase	NA	I1W619	Staphylococcus_phage	98.6	0.0e+00
WP_001205732.1|532171_532435_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291504.1|532443_532704_-	DUF1108 family protein	NA	A0EWW8	Staphylococcus_phage	96.5	4.4e-43
WP_016170555.1|532708_533011_-	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	97.0	1.0e-46
WP_000066011.1|533103_533265_-	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_001120936.1|533261_533582_-	DUF771 domain-containing protein	NA	A0A1W6JPI1	Staphylococcus_phage	100.0	7.4e-56
WP_025176250.1|533611_533830_-	hypothetical protein	NA	A0A068A2A3	Staphylococcus_phage	98.6	4.3e-31
WP_001025595.1|533826_534153_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_001294156.1|534479_534719_-	hypothetical protein	NA	A0ZS12	Staphylococcus_virus	100.0	2.9e-33
WP_016170553.1|534777_534981_+	hypothetical protein	NA	A0A2H4JBA9	uncultured_Caudovirales_phage	66.1	9.5e-17
WP_016170552.1|535097_535841_-	phage antirepressor KilAC domain-containing protein	NA	A0A0H3U319	Staphylococcus_phage	100.0	2.3e-137
WP_016170551.1|535891_536221_+	hypothetical protein	NA	A0A0H3U4Z1	Staphylococcus_phage	99.1	3.9e-52
WP_001025404.1|536209_536425_-	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000854072.1|536440_536704_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001801500.1|536700_536874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016170550.1|536836_537550_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	99.6	3.5e-130
WP_016170549.1|537565_538498_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	99.7	2.8e-172
WP_000591749.1|538503_538845_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000705248.1|539048_539231_+	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000825947.1|539330_539795_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_016170481.1|539853_540891_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	99.7	1.5e-179
WP_000595392.1|542011_543028_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|543049_544105_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
553241:553265	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
>prophage 4
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	1613175	1656889	2834575	tail,protease,portal,holin,terminase,capsid,integrase,head,plate	Staphylococcus_phage(92.75%)	69	1613065:1613082	1657625:1657642
1613065:1613082	attL	ATCATACAAGGATGGGAT	NA	NA	NA	NA
WP_016170637.1|1613175_1614381_-|integrase	site-specific integrase	integrase	A0A1X9H094	Staphylococcus_phage	98.8	2.1e-220
WP_000191459.1|1614506_1615121_+	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_001013104.1|1615117_1615264_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_001558060.1|1615353_1615749_-	hypothetical protein	NA	I1W601	Staphylococcus_phage	100.0	1.4e-69
WP_016170817.1|1615777_1616212_-	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	99.3	3.5e-24
WP_000525004.1|1616229_1616691_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333630.1|1616703_1617018_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_001121027.1|1617169_1617406_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_025176283.1|1617419_1618196_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	99.6	1.4e-140
WP_000939498.1|1618224_1618368_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|1618357_1618567_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001025401.1|1618622_1618868_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_016170627.1|1618836_1619202_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	99.2	1.2e-62
WP_001097552.1|1619256_1619472_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124160.1|1619496_1619760_+	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_047211484.1|1619773_1619935_+	DUF1270 family protein	NA	A0A2H4PQQ1	Staphylococcus_phage	98.1	1.2e-19
WP_000291090.1|1620026_1620287_+	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_000815401.1|1620296_1620518_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000139720.1|1620510_1621134_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934385.1|1621133_1621562_+	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_031888948.1|1621575_1622250_+	phi PV83 orf 19-like protein	NA	A0A0E3XBQ6	Staphylococcus_phage	98.2	5.8e-127
WP_000371251.1|1622356_1623205_-	DUF4393 domain-containing protein	NA	W5R9J9	Staphylococcus_phage	99.6	1.1e-159
WP_000132054.1|1623268_1623982_+	helix-turn-helix domain-containing protein	NA	A0A1J0MGB2	Staphylococcus_phage	79.3	9.2e-91
WP_000803056.1|1623991_1624771_+	ATP-binding protein	NA	Q9G022	Staphylococcus_virus	100.0	2.4e-145
WP_000237153.1|1624764_1624926_+	hypothetical protein	NA	D2JGK6	Staphylococcus_phage	100.0	4.5e-22
WP_001123673.1|1624938_1625160_+	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_001187252.1|1625578_1625764_+	DUF3113 family protein	NA	A0A0H3U473	Staphylococcus_phage	100.0	4.1e-27
WP_000907339.1|1625764_1626382_+	hypothetical protein	NA	A0A0H3U4U9	Staphylococcus_phage	100.0	4.2e-84
WP_000022736.1|1626381_1626636_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_060474161.1|1626635_1626884_+	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
WP_000693987.1|1626897_1627104_+	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	100.0	3.0e-34
WP_000695756.1|1627106_1627511_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
WP_000983953.1|1627507_1627702_+	hypothetical protein	NA	A0A0E3XCV8	Staphylococcus_phage	100.0	2.5e-27
WP_016060009.1|1628066_1628456_+	hypothetical protein	NA	I1W604	Staphylococcus_phage	100.0	1.4e-69
WP_001065061.1|1628448_1628697_+	DUF1024 family protein	NA	A0A2I6PEP2	Staphylococcus_phage	98.8	1.8e-38
WP_000185671.1|1628689_1629226_+	dUTP diphosphatase	NA	A0A2I6PEN6	Staphylococcus_phage	100.0	1.6e-95
WP_000195794.1|1629262_1629469_+	DUF1381 domain-containing protein	NA	A0A2I6PEM9	Staphylococcus_phage	100.0	1.6e-19
WP_000141180.1|1629465_1629669_+	hypothetical protein	NA	A0A2I6PEQ8	Staphylococcus_phage	100.0	3.4e-30
WP_000608275.1|1629661_1629898_+	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	100.0	2.8e-36
WP_171012236.1|1629887_1630277_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	99.2	8.9e-64
WP_000595263.1|1630273_1630426_+	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000265252.1|1630493_1630694_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_047211486.1|1630981_1632253_+	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	96.3	6.0e-133
WP_000513701.1|1632265_1632703_+	transcriptional regulator	NA	A0A2I6PDN2	Staphylococcus_phage	100.0	6.1e-77
WP_000196700.1|1632864_1633179_+	HNH endonuclease	NA	A0A2I6PDR3	Staphylococcus_phage	100.0	8.5e-57
WP_000778930.1|1633304_1633610_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PDN6	Staphylococcus_phage	100.0	3.7e-49
WP_000153549.1|1633599_1635291_+|terminase	terminase large subunit	terminase	A0A2I6PDP8	Staphylococcus_phage	99.8	0.0e+00
WP_001100670.1|1635295_1636534_+|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_000061868.1|1636517_1637291_+|protease	Clp protease ClpP	protease	A0A2I6PE26	Staphylococcus_phage	100.0	4.9e-138
WP_001142735.1|1637302_1638466_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000050975.1|1638534_1638813_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|1638824_1639157_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|1639153_1639555_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|1639555_1639951_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807540.1|1639985_1640627_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_000169127.1|1640718_1641174_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|1641231_1641582_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|1641623_1641782_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_047211487.1|1641795_1647996_+|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	99.9	0.0e+00
WP_001190533.1|1647995_1648820_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384462.1|1648828_1650412_+|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_000179860.1|1650411_1650702_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_016170708.1|1650717_1652628_+	hypothetical protein	NA	A0A2I6PF35	Staphylococcus_phage	99.8	0.0e+00
WP_047211488.1|1652627_1654094_+|plate	phage baseplate upper protein	plate	A0A2I6PEI6	Staphylococcus_phage	99.0	2.4e-271
WP_001166599.1|1654093_1654483_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|1654475_1654640_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466775.1|1654685_1654985_+	DUF2951 family protein	NA	M9QRV2	Staphylococcus_phage	98.0	5.9e-31
WP_000339146.1|1655120_1655423_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
WP_047211489.1|1655434_1656889_+	N-acetylmuramoyl-L-alanine amidase	NA	B7T0L1	Staphylococcus_virus	98.6	2.5e-284
1657625:1657642	attR	ATCATACAAGGATGGGAT	NA	NA	NA	NA
>prophage 5
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	2047619	2055440	2834575		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|2047619_2048675_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|2048674_2049361_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|2049335_2049809_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|2050151_2050592_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|2050871_2051456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|2051554_2052268_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|2052271_2052691_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|2052692_2053361_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|2053711_2054305_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|2054288_2055440_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 6
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	2071367	2082018	2834575		uncultured_Caudovirales_phage(62.5%)	10	NA	NA
WP_000193751.1|2071367_2072873_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|2073228_2073729_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|2073748_2074615_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|2075415_2075814_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|2075776_2077882_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|2077999_2078971_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|2079151_2079307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|2079345_2080317_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|2080303_2081260_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|2081256_2082018_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 7
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	2167541	2213192	2834575	tail,portal,holin,terminase,capsid,integrase,head,plate	Staphylococcus_phage(84.29%)	72	2165638:2165654	2199103:2199119
2165638:2165654	attL	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_001006450.1|2167541_2168792_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_025176267.1|2168781_2169246_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|2169396_2170794_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145726.1|2170861_2171911_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
WP_000337826.1|2172023_2172203_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|2172182_2173115_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_016170685.1|2173146_2173608_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	81.7	1.6e-64
WP_016170686.1|2173619_2173952_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	73.6	4.7e-37
WP_023604831.1|2174144_2174384_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	96.2	2.6e-37
WP_001148565.1|2174398_2175187_+	phage antirepressor KilAC domain-containing protein	NA	R9QSV3	Staphylococcus_phage	100.0	1.2e-144
WP_001148854.1|2175203_2175398_+	hypothetical protein	NA	Q4ZDS1	Staphylococcus_virus	90.5	4.6e-21
WP_000939503.1|2175428_2175572_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	91.3	1.8e-14
WP_000388992.1|2175592_2176150_-	hypothetical protein	NA	A0A2H4IYS4	uncultured_Caudovirales_phage	54.5	1.7e-47
WP_000977380.1|2176220_2176442_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	97.3	9.6e-31
WP_000048126.1|2176434_2176596_+	DUF1270 family protein	NA	A0A2H4PQQ1	Staphylococcus_phage	100.0	3.3e-20
WP_000291089.1|2176687_2176948_+	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_000815401.1|2176957_2177179_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000139720.1|2177171_2177795_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934385.1|2177794_2178223_+	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_001124438.1|2178236_2178911_+	hypothetical protein	NA	R4IH15	Staphylococcus_phage	96.9	1.4e-125
WP_001081076.1|2178907_2179057_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000414755.1|2179049_2179331_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190254.1|2179396_2180167_+	conserved phage C-terminal domain-containing protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000803062.1|2180176_2180956_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|2180949_2181108_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_001123695.1|2181120_2181342_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049794.1|2181351_2181756_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001187243.1|2181760_2181946_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|2181946_2182252_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_016170777.1|2182379_2182736_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	99.2	1.9e-60
WP_001562543.1|2182739_2182982_+	phage protein	NA	A0A0F6N3E1	Staphylococcus_phage	100.0	6.6e-41
WP_001557190.1|2182990_2183362_+	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_001065097.1|2183354_2183609_+	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_000714403.1|2183595_2183766_+	hypothetical protein	NA	A0A0H3U4U6	Staphylococcus_phage	100.0	8.2e-22
WP_001657251.1|2183758_2184295_+	dUTP diphosphatase	NA	A0A0H3U2Z8	Staphylococcus_phage	99.4	2.7e-95
WP_000195785.1|2184331_2184538_+	DUF1381 domain-containing protein	NA	A0A0F6N4I4	Staphylococcus_phage	100.0	1.1e-20
WP_000132920.1|2184534_2184729_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
WP_001072794.1|2184725_2184929_+	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_001657250.1|2184921_2185095_+	transcriptional activator RinB	NA	A0A0F6N3E7	Staphylococcus_phage	100.0	2.2e-22
WP_000990005.1|2185095_2185242_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162701.1|2185265_2185688_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_001038244.1|2185875_2186370_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
WP_000273011.1|2186372_2187668_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
WP_000909970.1|2187678_2189217_+|portal	phage portal protein	portal	A0A0F6N4I8	Staphylococcus_phage	100.0	2.4e-293
WP_001133044.1|2189223_2190219_+|capsid	minor capsid protein	capsid	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_000072208.1|2190291_2190462_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_000392151.1|2190570_2191191_+	DUF4355 domain-containing protein	NA	S4V984	Staphylococcus_phage	98.5	1.7e-69
WP_000438511.1|2191204_2192179_+|capsid	phage major capsid protein	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
WP_001114086.1|2192200_2192488_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_000208960.1|2192496_2192829_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268312.1|2192825_2193128_+	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_001017815.1|2193127_2193475_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_015990319.1|2193486_2193870_+	hypothetical protein	NA	B2ZYZ0	Staphylococcus_phage	100.0	2.6e-68
WP_023604958.1|2194531_2194897_+|tail	tail assembly chaperone	tail	A0A0F6N4J9	Staphylococcus_phage	99.2	1.8e-58
WP_000105584.1|2194926_2195271_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141480.1|2195287_2198755_+	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	100.0	4.2e-245
WP_000350675.1|2198767_2199715_+|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	100.0	2.8e-183
2199103:2199119	attR	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_000152718.1|2199723_2201622_+|tail	phage tail protein	tail	A0A0F6N3M1	Staphylococcus_phage	100.0	0.0e+00
WP_025176243.1|2201636_2203547_+	hypothetical protein	NA	A0A0F6N4K2	Staphylococcus_phage	99.8	0.0e+00
WP_016170469.1|2203546_2205370_+|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	99.8	0.0e+00
WP_000705896.1|2205369_2205747_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|2205750_2205924_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466777.1|2205963_2206263_+	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_001836236.1|2206399_2208298_+	glucosaminidase domain-containing protein	NA	A0A0F6N4K6	Staphylococcus_phage	100.0	0.0e+00
WP_016170467.1|2208310_2209549_+|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	99.3	5.0e-209
WP_016170466.1|2209554_2209950_+	hypothetical protein	NA	A0A2H4PQP8	Staphylococcus_phage	99.2	1.8e-67
WP_000351119.1|2210005_2210281_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001141517.1|2210267_2211680_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_001035620.1|2211739_2212297_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|2212671_2212824_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|2212894_2213005_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001286805.1|2213006_2213192_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
>prophage 8
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	2296276	2348290	2834575	bacteriocin,protease,tRNA	Streptococcus_phage(33.33%)	52	NA	NA
WP_016170570.1|2296276_2297266_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|2297559_2297955_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|2298325_2299045_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959282.1|2299165_2300152_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|2300199_2302008_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|2302467_2303274_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214070.1|2303296_2303662_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224619.1|2303765_2304359_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242103.1|2304544_2304892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|2304908_2305544_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|2305560_2306370_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669923.1|2306366_2307221_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|2307241_2308627_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|2308636_2310481_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|2310758_2311529_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|2311725_2312811_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570687.1|2313152_2314721_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288675.1|2314865_2315624_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600387.1|2315817_2316327_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154223.1|2316439_2317630_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258645.1|2317607_2318783_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340119.1|2319215_2320700_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|2320680_2320941_+	YueH family protein	NA	NA	NA	NA	NA
WP_016170656.1|2320940_2322503_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_000928413.1|2322804_2323608_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001795272.1|2323826_2326151_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021865.1|2326167_2327526_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414165.1|2327664_2329176_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|2329662_2330232_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|2330441_2330660_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|2330740_2331727_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|2331925_2332102_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033865.1|2332116_2332719_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_031763719.1|2333634_2333736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|2333745_2334018_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870829.1|2334061_2336026_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|2336028_2336349_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|2336345_2336987_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|2337074_2337365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|2337505_2337643_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|2337731_2338088_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|2338575_2339535_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|2339580_2339712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|2339775_2339991_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|2340155_2340707_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|2340758_2341697_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|2341878_2343240_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|2343226_2344900_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|2344886_2345690_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|2345682_2346504_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|2346741_2347071_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|2347108_2348290_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 9
NZ_CP026953	Staphylococcus aureus strain FDAARGOS_48 chromosome, complete genome	2834575	2368444	2376917	2834575		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|2368444_2368927_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010413.1|2368913_2370038_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|2370041_2370746_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|2370745_2371009_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|2371010_2371682_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|2371674_2373864_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|2373842_2375327_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|2375319_2376348_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|2376350_2376917_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
