assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001011095.1_ASM101109v1	NZ_CP011403	Lactobacillus salivarius str. Ren chromosome, complete genome	1	124138-124948	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,csn2	RT,cas1,cas2,csn2,DEDDh,DinG,csa3,cas3,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,WYL	Type II-A	GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC,GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC,GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC	36,36,36	1	1	124174-124203	NZ_CP011403.1_355055-355084	NA:NA:NA	9,11,10	11	TypeII-A	RT,cas1,cas2,csn2,DEDDh,DinG,csa3,cas3,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,WYL,cas14j,c2c4_V-U1	NA|166aa|up_4|NZ_CP011403.1_117362_117860_+,NA	NA|130aa|up_9|NZ_CP011403.1_111904_112294_+	pfam06115, DUF956, Domain of unknown function (DUF956)	NA|517aa|up_8|NZ_CP011403.1_112414_113965_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|364aa|up_7|NZ_CP011403.1_114385_115477_+	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase	NA|395aa|up_6|NZ_CP011403.1_115484_116669_+	cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains	NA|199aa|up_5|NZ_CP011403.1_116670_117267_+	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily	NA|166aa|up_4|NZ_CP011403.1_117362_117860_+	NA	NA|55aa|up_3|NZ_CP011403.1_117861_118026_-	pfam07963, N_methyl, Prokaryotic N-terminal methylation motif	cas1|302aa|up_2|NZ_CP011403.1_122249_123155_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP011403.1_123132_123438_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_0|NZ_CP011403.1_123434_124106_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|103aa|down_0|NZ_CP011403.1_125117_125426_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|202aa|down_1|NZ_CP011403.1_125441_126047_+	COG4709, COG4709, Predicted membrane protein [Function unknown]	NA|322aa|down_2|NZ_CP011403.1_126049_127015_+	pfam13349, DUF4097, Putative adhesin	NA|77aa|down_3|NZ_CP011403.1_127033_127264_+	pfam04024, PspC, PspC domain	NA|104aa|down_4|NZ_CP011403.1_127602_127914_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|505aa|down_5|NZ_CP011403.1_128315_129830_+	PRK00047, glpK, glycerol kinase GlpK	NA|610aa|down_6|NZ_CP011403.1_129842_131672_+	NF033461, glycerol3P_ox_1, type 1 glycerol-3-phosphate oxidase	NA|236aa|down_7|NZ_CP011403.1_131707_132415_+	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|363aa|down_8|NZ_CP011403.1_132533_133622_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|267aa|down_9|NZ_CP011403.1_133639_134440_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]
GCF_001011095.1_ASM101109v1	NZ_CP011403	Lactobacillus salivarius str. Ren chromosome, complete genome	2	772733-774023	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas1,cas2,csm6	RT,cas1,cas2,csn2,DEDDh,DinG,csa3,cas3,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,WYL	Type III-D,Type III-A,Type III-C,Type III-B	AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC,AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC,AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC	36,36,36	2	2	772848-772886|772997-773034	NZ_CP011404.1_61896-61858|NZ_CP011403.1_1287063-1287026	NA:NA:NA	14,17,17	17	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	RT,cas1,cas2,csn2,DEDDh,DinG,csa3,cas3,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,WYL,cas14j,c2c4_V-U1	NA,NA|70aa|down_4|NZ_CP011403.1_780184_780394_-,NA|62aa|down_5|NZ_CP011403.1_781271_781457_+,NA|163aa|down_6|NZ_CP011403.1_781453_781942_-	NA|297aa|up_9|NZ_CP011403.1_762526_763417_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|535aa|up_8|NZ_CP011403.1_763430_765035_+	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]	cas6|245aa|up_7|NZ_CP011403.1_765239_765974_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas10|764aa|up_6|NZ_CP011403.1_766006_768298_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|147aa|up_5|NZ_CP011403.1_768299_768740_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|222aa|up_4|NZ_CP011403.1_768759_769425_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|301aa|up_3|NZ_CP011403.1_769428_770331_+	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain	csm5gr7|331aa|up_2|NZ_CP011403.1_770347_771340_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	cas1|303aa|up_1|NZ_CP011403.1_771364_772273_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|up_0|NZ_CP011403.1_772275_772581_+	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	csm6|350aa|down_0|NZ_CP011403.1_774290_775340_+	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	NA|219aa|down_1|NZ_CP011403.1_775492_776149_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|223aa|down_2|NZ_CP011403.1_776164_776833_+	sd00006, TPR, Tetratricopeptide repeat	NA|825aa|down_3|NZ_CP011403.1_776825_779300_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|70aa|down_4|NZ_CP011403.1_780184_780394_-	NA	NA|62aa|down_5|NZ_CP011403.1_781271_781457_+	NA	NA|163aa|down_6|NZ_CP011403.1_781453_781942_-	NA	NA|254aa|down_7|NZ_CP011403.1_782076_782838_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|175aa|down_8|NZ_CP011403.1_782946_783471_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|116aa|down_9|NZ_CP011403.1_783612_783960_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]
GCF_001011095.1_ASM101109v1	NZ_CP011405	Lactobacillus salivarius str. Ren plasmid pR2, complete sequence	1	598-755	1	CRISPRCasFinder	no			Orphan	AAACCCTTGATACAAGCGGAACTGCAAAAAATGCAGTT	38	0	0	NA	NA	NA	1	1	Orphan	RT,cas1,cas2,csn2,DEDDh,DinG,csa3,cas3,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,WYL,cas14j,c2c4_V-U1	NA,NA|49aa|down_0|NZ_CP011405.1_1454_1601_+,NA|69aa|down_2|NZ_CP011405.1_3930_4137_-,NA|30aa|down_3|NZ_CP011405.1_7089_7179_-,NA|227aa|down_6|NZ_CP011405.1_8979_9660_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|49aa|down_0|NZ_CP011405.1_1454_1601_+	NA	NA|94aa|down_1|NZ_CP011405.1_2751_3033_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|69aa|down_2|NZ_CP011405.1_3930_4137_-	NA	NA|30aa|down_3|NZ_CP011405.1_7089_7179_-	NA	NA|116aa|down_4|NZ_CP011405.1_7437_7785_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|341aa|down_5|NZ_CP011405.1_7953_8976_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|227aa|down_6|NZ_CP011405.1_8979_9660_+	NA	NA|289aa|down_7|NZ_CP011405.1_10475_11342_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|287aa|down_8|NZ_CP011405.1_11343_12204_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|151aa|down_9|NZ_CP011405.1_12209_12662_+	smart00850, LytTR, LytTr DNA-binding domain
