assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000981845.1_ASM98184v1	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	1	142491-142578	1	CRISPRCasFinder	no	csa3,DinG	csa3,DinG,TnsE_C,c2c9_V-U4	Type I-A, Type IV-A?	CGGGGGGAATACTTCCAGCCAGCGGGT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,TnsE_C,c2c9_V-U4	NA|101aa|up_8|NZ_CP011314.1_132865_133168_+,NA|270aa|up_7|NZ_CP011314.1_133246_134056_+,NA|87aa|up_4|NZ_CP011314.1_137408_137669_+,NA|236aa|down_1|NZ_CP011314.1_143725_144433_-,NA|264aa|down_4|NZ_CP011314.1_146872_147664_-,NA|163aa|down_6|NZ_CP011314.1_148223_148712_-,NA|137aa|down_7|NZ_CP011314.1_148763_149174_-,NA|136aa|down_8|NZ_CP011314.1_149203_149611_-,NA|132aa|down_9|NZ_CP011314.1_149620_150016_-	NA|77aa|up_9|NZ_CP011314.1_132089_132320_-	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|101aa|up_8|NZ_CP011314.1_132865_133168_+	NA	NA|270aa|up_7|NZ_CP011314.1_133246_134056_+	NA	NA|259aa|up_6|NZ_CP011314.1_134055_134832_+	pfam00589, Phage_integrase, Phage integrase family	NA|447aa|up_5|NZ_CP011314.1_135269_136610_-	pfam13551, HTH_29, Winged helix-turn helix	NA|87aa|up_4|NZ_CP011314.1_137408_137669_+	NA	NA|157aa|up_3|NZ_CP011314.1_137777_138248_-	pfam08808, RES, RES domain	NA|148aa|up_2|NZ_CP011314.1_138244_138688_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|424aa|up_1|NZ_CP011314.1_138787_140059_-	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|141aa|up_0|NZ_CP011314.1_140058_140481_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|264aa|down_0|NZ_CP011314.1_142689_143481_-	pfam08317, Spc7, Spc7 kinetochore protein	NA|236aa|down_1|NZ_CP011314.1_143725_144433_-	NA	DinG|625aa|down_2|NZ_CP011314.1_144426_146301_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|189aa|down_3|NZ_CP011314.1_146303_146870_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	NA|264aa|down_4|NZ_CP011314.1_146872_147664_-	NA	NA|138aa|down_5|NZ_CP011314.1_147726_148140_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|163aa|down_6|NZ_CP011314.1_148223_148712_-	NA	NA|137aa|down_7|NZ_CP011314.1_148763_149174_-	NA	NA|136aa|down_8|NZ_CP011314.1_149203_149611_-	NA	NA|132aa|down_9|NZ_CP011314.1_149620_150016_-	NA
GCF_000981845.1_ASM98184v1	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	2	172036-172175	1	PILER-CR	no	TnsE_C	csa3,DinG,TnsE_C,c2c9_V-U4	Orphan	CCCAGTTCCCAACTATTTTGTCA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,WYL,TnsE_C,c2c9_V-U4	NA|126aa|up_8|NZ_CP011314.1_165904_166282_-,NA|124aa|up_7|NZ_CP011314.1_166691_167063_-,NA|166aa|up_6|NZ_CP011314.1_167123_167621_-,NA|96aa|down_0|NZ_CP011314.1_172291_172579_-,NA|54aa|down_1|NZ_CP011314.1_172634_172796_-,NA|91aa|down_2|NZ_CP011314.1_172859_173132_-,NA|69aa|down_3|NZ_CP011314.1_173215_173422_-,NA|65aa|down_4|NZ_CP011314.1_173723_173918_-,NA|161aa|down_6|NZ_CP011314.1_174600_175083_-,NA|112aa|down_7|NZ_CP011314.1_175420_175756_-,NA|71aa|down_8|NZ_CP011314.1_176283_176496_-	TnsE_C|539aa|up_9|NZ_CP011314.1_164057_165674_+	pfam18623, TnsE_C, TnsE C-terminal domain	NA|126aa|up_8|NZ_CP011314.1_165904_166282_-	NA	NA|124aa|up_7|NZ_CP011314.1_166691_167063_-	NA	NA|166aa|up_6|NZ_CP011314.1_167123_167621_-	NA	NA|175aa|up_5|NZ_CP011314.1_167689_168214_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|158aa|up_4|NZ_CP011314.1_168308_168782_-	cd00209, DHFR, Dihydrofolate reductase (DHFR)	NA|344aa|up_3|NZ_CP011314.1_169170_170202_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|179aa|up_2|NZ_CP011314.1_170268_170805_+	TIGR02249, Integrase/recombinase_E2_protein	NA|109aa|up_1|NZ_CP011314.1_170919_171246_+	TIGR02249, Integrase/recombinase_E2_protein	NA|80aa|up_0|NZ_CP011314.1_171433_171673_-	pfam08849, DUF1819, Putative inner membrane protein (DUF1819)	NA|96aa|down_0|NZ_CP011314.1_172291_172579_-	NA	NA|54aa|down_1|NZ_CP011314.1_172634_172796_-	NA	NA|91aa|down_2|NZ_CP011314.1_172859_173132_-	NA	NA|69aa|down_3|NZ_CP011314.1_173215_173422_-	NA	NA|65aa|down_4|NZ_CP011314.1_173723_173918_-	NA	NA|199aa|down_5|NZ_CP011314.1_173920_174517_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|161aa|down_6|NZ_CP011314.1_174600_175083_-	NA	NA|112aa|down_7|NZ_CP011314.1_175420_175756_-	NA	NA|71aa|down_8|NZ_CP011314.1_176283_176496_-	NA	NA|172aa|down_9|NZ_CP011314.1_176902_177418_-	pfam03235, DUF262, Protein of unknown function DUF262
GCF_000981845.1_ASM98184v1	NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	1	1186897-1187005	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TGTCCCACCCTGTACCACTTTTTTTAA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,TnsE_C,c2c9_V-U4	NA|182aa|up_9|NZ_CP011313.1_1180283_1180829_-,NA|53aa|up_7|NZ_CP011313.1_1181673_1181832_-,NA|69aa|up_6|NZ_CP011313.1_1182316_1182523_-,NA|1268aa|down_2|NZ_CP011313.1_1189824_1193628_-,NA|216aa|down_3|NZ_CP011313.1_1193816_1194464_-,NA|47aa|down_8|NZ_CP011313.1_1198124_1198265_-	NA|182aa|up_9|NZ_CP011313.1_1180283_1180829_-	NA	NA|150aa|up_8|NZ_CP011313.1_1180850_1181300_-	pfam05069, Phage_tail_S, Phage virion morphogenesis family	NA|53aa|up_7|NZ_CP011313.1_1181673_1181832_-	NA	NA|69aa|up_6|NZ_CP011313.1_1182316_1182523_-	NA	NA|338aa|up_5|NZ_CP011313.1_1182963_1183977_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|327aa|up_4|NZ_CP011313.1_1183987_1184968_-	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]	NA|125aa|up_3|NZ_CP011313.1_1184964_1185339_-	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]	NA|174aa|up_2|NZ_CP011313.1_1185335_1185857_-	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]	NA|95aa|up_1|NZ_CP011313.1_1185969_1186254_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|119aa|up_0|NZ_CP011313.1_1186348_1186705_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|690aa|down_0|NZ_CP011313.1_1187023_1189093_-	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|72aa|down_1|NZ_CP011313.1_1189128_1189344_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|1268aa|down_2|NZ_CP011313.1_1189824_1193628_-	NA	NA|216aa|down_3|NZ_CP011313.1_1193816_1194464_-	NA	NA|161aa|down_4|NZ_CP011313.1_1196385_1196868_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|159aa|down_5|NZ_CP011313.1_1196978_1197455_+	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin	NA|97aa|down_6|NZ_CP011313.1_1197444_1197735_+	PRK01777, PRK01777, RnfH family protein	NA|114aa|down_7|NZ_CP011313.1_1197801_1198143_-	PRK11548, PRK11548, outer membrane protein assembly factor BamE	NA|47aa|down_8|NZ_CP011313.1_1198124_1198265_-	NA	NA|554aa|down_9|NZ_CP011313.1_1198290_1199952_-	PRK10869, PRK10869, recombination and repair protein; Provisional
GCF_000981845.1_ASM98184v1	NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	2	2044964-2045065	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	34	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,TnsE_C,c2c9_V-U4	NA|38aa|up_6|NZ_CP011313.1_2036526_2036640_+,NA|44aa|down_6|NZ_CP011313.1_2051679_2051811_-,NA|62aa|down_9|NZ_CP011313.1_2055336_2055522_+	NA|217aa|up_9|NZ_CP011313.1_2032261_2032912_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|593aa|up_8|NZ_CP011313.1_2032922_2034701_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|463aa|up_7|NZ_CP011313.1_2035012_2036401_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional	NA|38aa|up_6|NZ_CP011313.1_2036526_2036640_+	NA	NA|1248aa|up_5|NZ_CP011313.1_2036806_2040550_+	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion]	NA|512aa|up_4|NZ_CP011313.1_2040546_2042082_+	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|237aa|up_3|NZ_CP011313.1_2042078_2042789_+	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|226aa|up_2|NZ_CP011313.1_2042788_2043466_+	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain	NA|299aa|up_1|NZ_CP011313.1_2043462_2044359_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|148aa|up_0|NZ_CP011313.1_2044466_2044910_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|281aa|down_0|NZ_CP011313.1_2046166_2047009_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|157aa|down_1|NZ_CP011313.1_2047051_2047522_-	PRK01617, PRK01617, hypothetical protein; Provisional	NA|301aa|down_2|NZ_CP011313.1_2047622_2048525_+	PRK10279, PRK10279, patatin-like phospholipase RssA	NA|338aa|down_3|NZ_CP011313.1_2048614_2049628_+	PRK10693, PRK10693, two-component system response regulator RssB	NA|301aa|down_4|NZ_CP011313.1_2049825_2050728_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|136aa|down_5|NZ_CP011313.1_2050849_2051257_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|44aa|down_6|NZ_CP011313.1_2051679_2051811_-	NA	NA|206aa|down_7|NZ_CP011313.1_2051818_2052436_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|892aa|down_8|NZ_CP011313.1_2052583_2055259_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|62aa|down_9|NZ_CP011313.1_2055336_2055522_+	NA
GCF_000981845.1_ASM98184v1	NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	3	4413208-4413302	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL,TnsE_C,c2c9_V-U4	NA|57aa|up_8|NZ_CP011313.1_4400254_4400425_+,NA	NA|282aa|up_9|NZ_CP011313.1_4399423_4400269_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|57aa|up_8|NZ_CP011313.1_4400254_4400425_+	NA	NA|570aa|up_7|NZ_CP011313.1_4400606_4402316_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP011313.1_4402326_4403829_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP011313.1_4403966_4404662_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP011313.1_4404837_4407195_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP011313.1_4407382_4410289_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP011313.1_4410301_4410961_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP011313.1_4411035_4411575_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP011313.1_4411754_4413119_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP011313.1_4413443_4415069_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP011313.1_4415058_4415757_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP011313.1_4415789_4416617_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP011313.1_4416860_4419209_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP011313.1_4419263_4420550_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP011313.1_4420555_4421545_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP011313.1_4421541_4422363_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP011313.1_4422365_4422743_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP011313.1_4422747_4423596_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP011313.1_4423847_4424327_-	PRK10769, folA, type 3 dihydrofolate reductase
