The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	657675	676460	5278254	terminase,head,protease,transposase,tail,integrase,portal,capsid	uncultured_Caudovirales_phage(80.0%)	21	657605:657625	673752:673772
657605:657625	attL	GTATCCTATAGGTATCCTAGA	NA	NA	NA	NA
WP_046654812.1|657675_659100_+|integrase	integrase family protein	integrase	NA	NA	NA	NA
WP_004174241.1|659096_659711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004174242.1|659858_660065_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_071533773.1|660173_660365_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_046653341.1|660504_660765_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_071533744.1|660757_660958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653342.1|660962_661262_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_046653344.1|661258_663058_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	49.0	3.9e-130
WP_046653346.1|663337_663583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004176137.1|663953_664985_-|transposase	IS630-like element ISEc33 family transposase	transposase	NA	NA	NA	NA
WP_046653347.1|665819_666986_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	89.9	1.0e-195
WP_046653348.1|667036_667597_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
WP_004174256.1|667598_668834_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	95.9	1.0e-233
WP_046653351.1|668830_669169_+|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	47.7	9.6e-22
WP_046653352.1|669161_669455_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	81.4	9.4e-42
WP_044245563.1|669454_669898_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	63.3	4.9e-50
WP_040211070.1|670173_670530_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	97.4	1.6e-59
WP_046653357.1|670513_672175_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	96.0	0.0e+00
WP_148552461.1|672301_673471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002917636.1|674012_674519_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
673752:673772	attR	GTATCCTATAGGTATCCTAGA	NA	NA	NA	NA
WP_004174339.1|674618_676460_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.3e-35
>prophage 2
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	1687121	1695226	5278254	tRNA,transposase	Planktothrix_phage(28.57%)	7	NA	NA
WP_004175147.1|1687121_1687985_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_046653648.1|1687995_1688769_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	3.3e-25
WP_004151134.1|1689009_1689906_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_000019473.1|1690261_1691242_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_046653651.1|1691348_1692710_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004175198.1|1693028_1693751_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_046653654.1|1693747_1695226_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 3
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	1946468	1999508	5278254	plate,protease,transposase	Staphylococcus_phage(20.0%)	57	NA	NA
WP_019705163.1|1946468_1947215_+|protease	proteasome-type protease	protease	NA	NA	NA	NA
WP_026008344.1|1947653_1948640_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_004189318.1|1948632_1949433_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_004145488.1|1949470_1949593_-	nitrilotriacetate monooxygenase	NA	NA	NA	NA	NA
WP_004219597.1|1949890_1950034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910764.1|1950210_1951152_+	transcriptional regulator TdcA	NA	NA	NA	NA	NA
WP_032441318.1|1951245_1952235_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA	NA
WP_004200322.1|1952260_1953592_+	threonine/serine transporter TdcC	NA	NA	NA	NA	NA
WP_029602072.1|1953619_1954828_+	propionate kinase	NA	NA	NA	NA	NA
WP_004175487.1|1954856_1957151_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.7	1.1e-158
WP_004225356.1|1957201_1957348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026008343.1|1957637_1958696_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004175489.1|1958805_1959720_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019705159.1|1959729_1961016_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_004148803.1|1961012_1961888_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	41.5	9.5e-05
WP_004175491.1|1961884_1962604_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.0	1.5e-11
WP_002910720.1|1962609_1963503_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004180410.1|1963786_1965430_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	50.4	5.7e-136
WP_002910717.1|1965479_1965956_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002910715.1|1966056_1966983_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004175494.1|1967286_1968582_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.8	9.6e-62
WP_026008342.1|1968593_1969403_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_004152315.1|1969377_1970277_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046653733.1|1970386_1970869_-	cold shock domain-containing protein	NA	NA	NA	NA	NA
WP_073971752.1|1970966_1971758_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.2	3.0e-05
WP_002910652.1|1971783_1972323_-	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
WP_002910650.1|1972437_1972767_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_004148795.1|1972937_1973099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653737.1|1973336_1974677_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_023280277.1|1974673_1975327_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_046653741.1|1975330_1977028_+	OmpA family protein	NA	NA	NA	NA	NA
WP_040216883.1|1977489_1979976_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_046653744.1|1979999_1981355_+	S-type Pyocin	NA	NA	NA	NA	NA
WP_002910593.1|1981355_1981865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653746.1|1981861_1982398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162487897.1|1982474_1982999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040216887.1|1983082_1983592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040216891.1|1983588_1983780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343205.1|1983957_1984986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343204.1|1985003_1985315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343203.1|1985336_1986230_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BSL8	Microcystis_phage	28.8	8.8e-14
WP_014343202.1|1986275_1986392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343201.1|1986413_1987307_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BSL8	Microcystis_phage	27.3	1.7e-12
WP_038435084.1|1987332_1987461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019473.1|1987736_1988717_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_162487910.1|1988790_1989024_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA	NA
WP_014343198.1|1988987_1989560_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	33.3	3.9e-07
WP_014343197.1|1989693_1989921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343196.1|1989904_1990039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343194.1|1990240_1990483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004175522.1|1990780_1991047_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_014343193.1|1991050_1992208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653757.1|1992191_1995602_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_046653759.1|1995735_1997499_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_162487911.1|1997528_1998545_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_077256175.1|1998525_1999062_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_032418818.1|1999064_1999508_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 4
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	2073390	2119992	5278254	head,terminase,integrase	Escherichia_phage(19.05%)	63	2073199:2073220	2120958:2120979
2073199:2073220	attL	TTTTGTATGTGCTCTTTCGTGC	NA	NA	NA	NA
WP_046653769.1|2073390_2074614_+|integrase	site-specific integrase	integrase	A0A1P8DTG6	Proteus_phage	59.0	2.5e-136
WP_046653772.1|2074796_2075024_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	58.0	2.2e-14
WP_046653774.1|2075020_2075212_-	DUF1382 family protein	NA	A0A0P0ZC60	Stx2-converting_phage	62.7	7.8e-13
WP_046653776.1|2075208_2075895_-	hypothetical protein	NA	M1F3E2	Salmonella_phage	60.7	3.1e-67
WP_046653778.1|2075887_2076232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046653780.1|2076228_2076450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077257445.1|2076446_2078132_-	phage N-6-adenine-methyltransferase	NA	Q6V7R9	Burkholderia_virus	56.8	2.0e-107
WP_046653782.1|2078128_2078434_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046653785.1|2078468_2078951_-	siphovirus Gp157 family protein	NA	G8C7S9	Escherichia_phage	92.5	8.2e-75
WP_046653787.1|2078947_2079862_-	DNA recombinase	NA	G8C7T0	Escherichia_phage	90.8	4.3e-157
WP_016529276.1|2079871_2080156_-	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	8.6e-40
WP_040182104.1|2080244_2080439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162487899.1|2080431_2080557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046653792.1|2081083_2081902_-	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_046653794.1|2081898_2082723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046653796.1|2083032_2083731_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	83.6	1.8e-107
WP_046653798.1|2083842_2084070_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
WP_004139615.1|2084109_2084331_+	bacteriophage CII family protein	NA	NA	NA	NA	NA
WP_046653800.1|2084416_2085277_+	replication protein	NA	K7PGT1	Enterobacteria_phage	49.5	6.0e-60
WP_046653802.1|2085273_2086122_+	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.1	2.3e-88
WP_046653803.1|2086118_2086421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653806.1|2086417_2086642_+	hypothetical protein	NA	H9C169	Pectobacterium_phage	50.0	6.4e-14
WP_071844628.1|2087511_2088297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148552462.1|2088409_2088781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148552463.1|2089065_2089338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004884220.1|2089582_2090038_+	dLP12 prophage	NA	K7P7B8	Enterobacteria_phage	69.5	1.0e-55
WP_046653814.1|2090037_2090208_+	hypothetical protein	NA	G8C7V4	Escherichia_phage	71.4	2.8e-14
WP_046653817.1|2090200_2090782_+	protein ninG	NA	E7C9S3	Salmonella_phage	43.8	1.8e-39
WP_046653819.1|2090778_2091009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653822.1|2091005_2091146_+	YlcG family protein	NA	NA	NA	NA	NA
WP_046653824.1|2091142_2091643_+	antiterminator	NA	G8C7V7	Escherichia_phage	91.5	5.7e-87
WP_046653826.1|2092689_2093004_+	hypothetical protein	NA	H6WRZ3	Salmonella_phage	83.7	6.3e-44
WP_046653828.1|2093006_2093510_+	lysozyme	NA	K7P7Q3	Enterobacteria_phage	80.2	8.5e-75
WP_046653830.1|2093506_2093896_+	DUF2570 domain-containing protein	NA	Q8SBD9	Shigella_phage	46.0	7.7e-23
WP_071844629.1|2094187_2094763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654825.1|2095475_2096111_+	hypothetical protein	NA	I6S676	Salmonella_phage	80.2	2.3e-101
WP_046653833.1|2096141_2096609_+	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	73.8	1.1e-57
WP_046653834.1|2096592_2097891_+|terminase	PBSX family phage terminase large subunit	terminase	Q5G8Y7	Enterobacteria_phage	94.8	2.3e-241
WP_046653835.1|2097903_2099373_+	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	55.9	4.5e-148
WP_046653836.1|2099299_2100310_+|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	67.1	1.2e-112
WP_052741619.1|2100310_2100655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046653837.1|2100677_2102033_+	hypothetical protein	NA	F1C5D9	Cronobacter_phage	52.4	1.1e-127
WP_016529582.1|2102032_2102494_+	hypothetical protein	NA	B1GS72	Salmonella_phage	50.3	5.0e-29
WP_023283359.1|2102490_2103546_+	hypothetical protein	NA	A0A291AXD4	Shigella_phage	53.5	1.2e-102
WP_046653839.1|2103578_2103863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653840.1|2103865_2104246_+	hypothetical protein	NA	A0A0M3LQS8	Mannheimia_phage	42.1	4.2e-18
WP_071844633.1|2104245_2104419_+	50S ribosomal protein L13	NA	Q5G8X7	Enterobacteria_phage	52.6	3.2e-13
WP_046654827.1|2104418_2104781_+	hypothetical protein	NA	A0A0M3LSC9	Mannheimia_phage	49.2	1.6e-19
WP_032444927.1|2104783_2105152_+	hypothetical protein	NA	F1C5E3	Cronobacter_phage	82.0	2.5e-47
WP_046653844.1|2105148_2105532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046653847.1|2105590_2106355_+	immunoglobulin domain-containing protein	NA	G0ZNE6	Cronobacter_phage	43.4	9.4e-41
WP_046653848.1|2106422_2107112_+	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	54.2	6.0e-63
WP_046653852.1|2107529_2108366_+	hypothetical protein	NA	A0A0M4R2T6	Salmonella_phage	43.6	7.1e-50
WP_046653854.1|2108682_2109261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071844635.1|2109296_2109626_+	hypothetical protein	NA	A0A222YZ97	Escherichia_phage	53.3	4.2e-22
WP_046653856.1|2109668_2112302_+	tape measure protein	NA	A0A1B1W284	Salmonella_phage	38.1	4.8e-84
WP_046653859.1|2112342_2112522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071844636.1|2112498_2112768_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
WP_023283377.1|2112894_2113371_+	hypothetical protein	NA	A0A2P1MXB5	Escherichia_phage	49.0	3.0e-37
WP_046653863.1|2113370_2113841_+	hypothetical protein	NA	R9TPR6	Aeromonas_phage	39.1	4.7e-27
WP_023328737.1|2113837_2114233_+	hypothetical protein	NA	F1C5F2	Cronobacter_phage	55.6	1.2e-36
WP_046653866.1|2114219_2116697_+	MoaD/ThiS family protein	NA	F1C5A7	Cronobacter_phage	45.5	3.6e-198
WP_046653868.1|2119179_2119992_+	hypothetical protein	NA	A0A2H4N7C5	Pectobacterium_phage	35.7	8.5e-40
2120958:2120979	attR	TTTTGTATGTGCTCTTTCGTGC	NA	NA	NA	NA
>prophage 5
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	2729652	2739067	5278254		Escherichia_phage(87.5%)	9	NA	NA
WP_162487903.1|2729652_2731287_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	55.7	4.4e-181
WP_004176258.1|2731341_2732607_+	MFS transporter	NA	NA	NA	NA	NA
WP_020805010.1|2732637_2733726_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	1.8e-210
WP_004176262.1|2733812_2734073_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
WP_063864697.1|2734370_2735231_+	class A beta-lactamase SHV-63	NA	A0A077SL40	Escherichia_phage	99.0	2.9e-155
WP_046654237.1|2735251_2736013_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	99.2	7.2e-134
WP_002903955.1|2736274_2737177_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_004183946.1|2737188_2738454_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.3	6.6e-233
WP_002210516.1|2738446_2739067_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 6
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	3022330	3052256	5278254	holin,terminase,integrase	Enterobacteria_phage(24.14%)	39	3017063:3017078	3049562:3049577
3017063:3017078	attL	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_046654357.1|3022330_3023731_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.5	1.2e-126
WP_004190663.1|3023730_3025038_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	58.9	3.6e-149
WP_046654359.1|3025015_3026011_-|terminase	terminase small subunit	terminase	Q5QF76	Pseudomonas_virus	45.5	1.5e-38
WP_038421382.1|3026569_3026815_-	DUF2560 family protein	NA	A0A286N2R1	Klebsiella_phage	97.5	1.6e-34
WP_029603003.1|3027139_3027412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031591489.1|3027544_3027829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004190672.1|3028064_3028340_-	hypothetical protein	NA	A0A286N2Q8	Klebsiella_phage	72.5	2.2e-08
WP_004190674.1|3028336_3028681_-	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	80.7	2.0e-38
WP_046654365.1|3028677_3029217_-	glycoside hydrolase family 108 protein	NA	A0A286N2Q6	Klebsiella_phage	98.3	5.7e-101
WP_024176410.1|3029213_3029513_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	83.8	4.5e-39
WP_046654367.1|3030633_3031260_-	YagU family protein	NA	NA	NA	NA	NA
WP_046654369.1|3031512_3032328_-	molecular chaperone	NA	A0A286N2Q2	Klebsiella_phage	74.1	9.5e-108
WP_046654371.1|3032324_3032621_-	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	74.0	9.2e-37
WP_016946309.1|3032829_3033426_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	80.1	1.3e-90
WP_004184503.1|3033804_3034038_-	DinI-like family protein	NA	K7PM44	Enterobacteria_phage	68.8	2.9e-25
WP_032413665.1|3034790_3035090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038991414.1|3035185_3035614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020804600.1|3035617_3035839_-	hypothetical protein	NA	A9YWV3	Burkholderia_phage	49.4	1.3e-11
WP_020804604.1|3035835_3036090_-	hypothetical protein	NA	S5MQM0	Escherichia_phage	50.6	1.4e-09
WP_020804603.1|3036082_3036286_-	hypothetical protein	NA	A0A2R2Z313	Escherichia_phage	84.8	3.8e-26
WP_032417027.1|3037059_3037395_-	DUF977 family protein	NA	H6WRX9	Salmonella_phage	43.0	1.3e-10
WP_032417026.1|3037402_3038152_-	ATP-binding protein	NA	H6WRX8	Salmonella_phage	83.1	1.3e-119
WP_032417025.1|3038154_3039069_-	DNA-binding protein	NA	V5URT9	Shigella_phage	54.1	1.0e-89
WP_020804480.1|3039083_3039272_-	ClpX C4-type zinc finger	NA	NA	NA	NA	NA
WP_023287506.1|3039359_3039896_-	bacteriophage regulatory protein CII	NA	K7PJT7	Enterobacteria_phage	70.4	2.1e-63
WP_029503646.1|3039898_3040132_-	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	61.6	2.1e-20
WP_004190707.1|3040236_3040632_+	helix-turn-helix transcriptional regulator	NA	K7PM35	Enterobacteria_phage	74.0	3.1e-48
WP_136085610.1|3040649_3040748_+	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_020805737.1|3041892_3042096_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	76.1	6.3e-21
WP_158423358.1|3042460_3042691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020804303.1|3042984_3043176_+	YebW family protein	NA	NA	NA	NA	NA
WP_020804294.1|3043184_3043340_+	hypothetical protein	NA	K7P7H7	Enterobacteria_phage	71.2	5.7e-14
WP_038991407.1|3043477_3046576_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	55.5	8.2e-293
WP_032421692.1|3046588_3047698_+	recombinase RecT	NA	H6WRX0	Salmonella_phage	87.0	9.1e-186
WP_022631172.1|3047738_3047978_+	DUF4060 family protein	NA	M9P0E0	Enterobacteria_phage	67.5	6.8e-22
WP_046654382.1|3048198_3049416_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	51.5	9.5e-120
WP_004151901.1|3049562_3050453_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
3049562:3049577	attR	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_004140266.1|3050452_3051445_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
WP_004140269.1|3051446_3052256_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 7
NZ_CP011313	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 chromosome, complete genome	5278254	3454887	3464351	5278254	protease,tRNA	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_004179158.1|3454887_3456609_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_004141853.1|3456635_3457355_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3457708_3457927_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002896522.1|3458047_3460327_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_002896520.1|3460357_3460675_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3461000_3461222_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_004150848.1|3461298_3463239_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896440.1|3463235_3464351_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 1
NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	361964	534	64122	361964	transposase,protease,holin,integrase	Escherichia_phage(21.74%)	59	27823:27882	70116:71456
WP_001567368.1|534_1938_+|transposase	ISNCY-like element ISKpn21 family transposase	transposase	NA	NA	NA	NA
WP_025368661.1|2806_3538_+	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_016947102.1|3770_4529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181725.1|4594_4984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124990483.1|5011_5341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001100942.1|5568_6216_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_023287203.1|6552_7794_-	hypothetical protein	NA	A0A2D1GNA9	Pseudoalteromonas_phage	25.1	4.8e-10
WP_004026611.1|7878_8454_-	tellurium resistance cAMP binding protein TerE	NA	K4JRX3	Caulobacter_phage	42.6	9.6e-30
WP_004026609.1|8540_9119_-	tellurium resistance membrane protein TerD	NA	K4JRX3	Caulobacter_phage	40.8	1.9e-33
WP_004026607.1|9157_10198_-	tellurium resistance membrane protein TerC	NA	K7QKE8	Escherichia_phage	46.5	1.8e-71
WP_004026604.1|10221_10677_-	tellurium resistance membrane protein TerB	NA	NA	NA	NA	NA
WP_046654854.1|10699_11851_-	tellurium resistance system protein TerA	NA	NA	NA	NA	NA
WP_004210240.1|11847_12432_-	tellurium resistance protein	NA	K4JRX3	Caulobacter_phage	29.9	1.8e-12
WP_046654855.1|12743_13802_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
WP_032720945.1|13813_14956_+	adenine/guanine phosphoribosyltransferase	NA	A0A172Q0Y1	Acinetobacter_phage	27.9	1.1e-32
WP_046654856.1|14948_15722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004210251.1|15723_16803_+|protease	cysteine protease StiP family protein	protease	A0A172Q0S8	Acinetobacter_phage	33.8	1.1e-39
WP_014386544.1|16802_17759_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA	NA
WP_046654857.1|17769_18993_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_004026591.1|18995_19454_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_014386542.1|19933_20572_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_000654812.1|20923_21892_-|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	99.7	2.1e-186
WP_029497196.1|21978_22263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654859.1|22498_22774_-	hypothetical protein	NA	G8C7W1	Escherichia_phage	56.2	2.3e-18
WP_046654860.1|22776_23406_-	glycoside hydrolase family 19 protein	NA	F1C591	Cronobacter_phage	74.4	9.3e-87
WP_000243811.1|23405_23687_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	48.4	4.8e-19
WP_001294159.1|23673_24060_-	membrane protein	NA	A0A192Y8P2	Salmonella_phage	90.6	1.6e-57
WP_001018764.1|24225_24465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038806622.1|24615_25194_-	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	57.2	4.9e-50
WP_046654861.1|25190_25832_-	DNA methyltransferase	NA	I6PDF5	Cronobacter_phage	68.4	3.7e-83
WP_050484678.1|25828_26473_-	NinG family protein	NA	A0A1W6JNX3	Morganella_phage	54.3	1.9e-39
WP_046654952.1|26442_27228_-	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	61.4	6.6e-82
27823:27882	attL	GAAAACGGAATCTATGGTCACTCCCGTTTTTGCAACACCGATTTTGACGACAAGTTGGCT	NA	NA	NA	NA
WP_000427623.1|28087_29092_-|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
WP_123252884.1|29669_30761_+	DNA-binding transcriptional repressor LacI	NA	C6ZCU4	Enterobacteria_phage	97.2	2.8e-187
WP_046654862.1|30868_33928_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	96.0	0.0e+00
WP_046654864.1|33979_35233_+	lactose permease	NA	NA	NA	NA	NA
WP_003846919.1|35289_35460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021553367.1|37500_38505_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_021553366.1|38988_39678_+	D-galactonate utilization transcriptional regulator DgoR	NA	NA	NA	NA	NA
WP_021553365.1|39674_40553_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA	NA
WP_021553364.1|40536_41154_+	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA	NA
WP_021553363.1|41150_42299_+	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	33.6	7.2e-53
WP_021553359.1|44238_45696_+	DUF560 domain-containing protein	NA	NA	NA	NA	NA
WP_050576801.1|45880_48649_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_053517089.1|48694_49033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052455076.1|49036_49489_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_021553356.1|50138_50993_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_040209996.1|51002_51260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040209999.1|51256_52567_+	MFS transporter	NA	NA	NA	NA	NA
WP_077257460.1|52703_53672_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	91.0	3.2e-171
WP_023328948.1|54591_54906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004026565.1|55149_55602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|56871_57576_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000240536.1|58331_59183_+	replication protein	NA	NA	NA	NA	NA
WP_001043265.1|59490_60306_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.6	3.5e-09
WP_001082319.1|60366_61170_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA	NA
WP_000480968.1|61169_62006_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
WP_001067855.1|62066_62771_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000935452.1|62817_64122_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
70116:71456	attR	AGCCAACTTGTCGTCAAAATCGGTGTTGCAAAAACGGGAGTGACCATAGATTCCGTTTTCTGAGACGACCCCTATTATGGCGAAGGTATCATTCAGGAAGCGTTGATGAAGGATTATCTCTGTAAAAAGTTATTCAACCGGCTTTCCGGTACCCTGGTGATCAGAGCGCGCTGCGGCAATAACATTACTGGCCTGGCATGTTGCAATATTCTTTATCCCTCGCCCCGATACAGCGGTCAGCTGCATATTAAAGAGCTGTATGTTTCTCAGTGCGATCGAAATAAGGGCACGGGTAAAGCGATAATGCGCTTTATAGCCCGGCTTGCGCTTGAACAGGAATGCCTTAGCCTTAGCTGGAACGCTGAAAAATCCAACCCCGGCGCTAACCGTTTTTATCAGGCTCTGGGAGGCAGAATAAATGATCATATCGTCAATTATTACCTCCACGGGGAGAGCCTGAGCAAACTGGCCTCAGGCATTTGAGAAGCACACGGTCACACTGCTTCCGGTAGTCAATAAACCGGTAAACCAGCAATAGACATAAGCGGCTATTTAACGACCCTGCCCTGAACCGACGACCGGGTCGAATTTGCTTTCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGCGTTTAAGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGGAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAGCTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGATTTTTTTCTCC	NA	NA	NA	NA
>prophage 2
NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	361964	68905	182935	361964	transposase,integrase	Escherichia_phage(21.95%)	113	84070:84087	176047:176062
WP_000427623.1|68905_69910_+|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
WP_000656305.1|70220_70598_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000412211.1|70798_71458_-	type A-1 chloramphenicol O-acetyltransferase	NA	G3CFL0	Escherichia_phage	100.0	8.4e-131
WP_048268720.1|72796_74089_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.7	7.2e-17
WP_046654869.1|74076_74550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_131368068.1|75280_75766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004176137.1|77225_78257_+|transposase	IS630-like element ISEc33 family transposase	transposase	NA	NA	NA	NA
WP_046654872.1|78549_79329_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_046654873.1|79328_79955_-	aldolase	NA	A0A077SK32	Escherichia_phage	84.0	4.9e-96
WP_046654874.1|79951_81211_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	64.6	3.2e-147
WP_046654956.1|81743_82505_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	63.5	1.3e-82
WP_113772116.1|82894_84015_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.4	3.3e-50
84070:84087	attL	CAACGGGGAGCAGGTCAA	NA	NA	NA	NA
WP_162487917.1|84351_85686_+	MFS transporter	NA	NA	NA	NA	NA
84070:84087	attL	CAACGGGGAGCAGGTCAA	NA	NA	NA	NA
WP_046654877.1|85703_86681_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_052741626.1|86852_88829_-	S8 family peptidase	NA	NA	NA	NA	NA
WP_113772117.1|88922_90070_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	90.4	2.3e-144
WP_046654880.1|90372_91359_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023328886.1|91484_91790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654881.1|93490_96142_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	34.0	4.6e-151
WP_046654959.1|98321_98921_+	recombinase family protein	NA	NA	NA	NA	NA
WP_046654882.1|98948_99785_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_012561111.1|99849_100248_-	VOC family protein	NA	NA	NA	NA	NA
WP_046654883.1|100291_101401_-	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.5	2.9e-30
WP_017384071.1|101435_101711_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_077257461.1|102073_102604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039390023.1|103222_103531_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046654885.1|103627_104752_-	alkene reductase	NA	NA	NA	NA	NA
WP_046654887.1|105628_105985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654888.1|106895_108029_-	alcohol dehydrogenase catalytic domain-containing protein	NA	E3SJ82	Synechococcus_phage	28.6	7.5e-10
WP_046654889.1|108601_109534_-	nucleoside recognition family protein	NA	NA	NA	NA	NA
WP_046654890.1|109716_110592_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_046654962.1|110705_111551_+	DMT family transporter	NA	NA	NA	NA	NA
WP_046654891.1|111626_112463_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046654892.1|112757_113417_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_046654893.1|113458_114343_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046654894.1|114571_115552_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_046654895.1|116667_117660_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_046654896.1|118122_118539_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_039390198.1|118535_118766_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_071844662.1|119924_120251_-	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
WP_052741628.1|120783_121857_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_077254676.1|121932_122901_-|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	98.8	3.9e-185
WP_046654899.1|124639_124819_-	general stress protein	NA	NA	NA	NA	NA
WP_158423359.1|125077_125236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654900.1|125846_127943_-	pyrroloquinoline quinone-dependent dehydrogenase	NA	NA	NA	NA	NA
WP_046654901.1|127953_128319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046654902.1|128334_128541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654903.1|128705_129131_-	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	72.9	1.0e-52
WP_046654904.1|129143_130433_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	70.2	6.0e-165
WP_046654905.1|130477_130798_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	46.7	1.7e-20
WP_046654906.1|130883_131582_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.1	6.5e-89
WP_046654907.1|131676_132093_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_046654908.1|132089_132320_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_046654909.1|132865_133168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110247212.1|133246_134056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654911.1|134055_134832_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	89.3	1.0e-50
WP_046654912.1|135269_136610_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
135014:135031	attR	TTGACCTGCTCCCCGTTG	NA	NA	NA	NA
WP_004026352.1|137408_137669_+	hypothetical protein	NA	NA	NA	NA	NA
135014:135031	attR	TTGACCTGCTCCCCGTTG	NA	NA	NA	NA
WP_004026354.1|137777_138248_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_004026357.1|138244_138688_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_004181894.1|138787_140059_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	58.3	3.9e-140
WP_004181893.1|140058_140481_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	49.3	6.3e-31
WP_004181891.1|142689_143481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004181864.1|143725_144433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883274.1|144426_146301_-	DEAD/DEAH box helicase	NA	A0A127AW80	Bacillus_phage	27.1	5.2e-08
WP_004197662.1|146303_146870_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA	NA
WP_004197663.1|146872_147664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883268.1|147726_148140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046654913.1|148223_148712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016947074.1|148763_149174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883249.1|149203_149611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883245.1|149620_150016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004883242.1|150463_151705_-	hypothetical protein	NA	A0A2P9HXK7	Yersinia_phage	28.9	6.7e-12
WP_046654914.1|152588_153035_-	DUF957 domain-containing protein	NA	NA	NA	NA	NA
WP_032719463.1|153328_153937_-	hypothetical protein	NA	K4JV11	Caulobacter_phage	41.0	4.4e-25
WP_046654915.1|154006_154456_-	hypothetical protein	NA	A0A1I9KFG8	Aeromonas_phage	40.0	2.3e-18
WP_004197222.1|154907_155675_-	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	62.7	3.5e-43
WP_004197199.1|155738_156263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001029679.1|156747_157569_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_000267723.1|157555_159664_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000019473.1|161059_162040_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_001243518.1|162530_164057_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000251879.1|164057_165674_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_001271300.1|165904_166282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000119696.1|166691_167063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001444089.1|167123_167621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000704156.1|167689_168214_-	streptothricin N-acetyltransferase Sat2	NA	NA	NA	NA	NA
WP_000777554.1|168308_168782_-	trimethoprim-resistant dihydrofolate reductase DfrA1	NA	G3MBI7	Bacillus_virus	32.1	3.7e-19
WP_004176137.1|169170_170202_+|transposase	IS630-like element ISEc33 family transposase	transposase	NA	NA	NA	NA
WP_000071896.1|170268_170805_+|integrase	class 2 integron integrase IntI2	integrase	A0A1P8DJJ6	Virus_Rctr41k	34.4	6.9e-14
WP_000497519.1|170919_171246_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	52.0	2.1e-18
WP_001353740.1|171433_171673_-	DUF1819 family protein	NA	NA	NA	NA	NA
WP_046654917.1|172291_172579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162487916.1|172634_172796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197207.1|172859_173132_-	hypothetical protein	NA	I7B2L9	Escherichia_phage	48.9	1.5e-12
WP_004197220.1|173215_173422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046654918.1|173723_173918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046654966.1|173920_174517_-	DUF551 domain-containing protein	NA	A0A0S1S1U7	Klebsiella_phage	94.1	2.4e-20
WP_016947068.1|174600_175083_-	hypothetical protein	NA	A0A077SLK5	Escherichia_phage	58.3	4.4e-12
WP_158423360.1|175420_175756_-	hypothetical protein	NA	J9Q804	Salmonella_phage	51.4	5.6e-14
WP_004141386.1|176283_176496_-	hypothetical protein	NA	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	45.5	8.1e-11
WP_032719523.1|176902_177418_-	DUF262 domain-containing protein	NA	A0A2H4FWH2	Salmonella_phage	68.2	3.7e-65
WP_052741629.1|177448_177952_-	hypothetical protein	NA	A0A1V0E5L6	Salmonella_phage	66.2	2.8e-25
WP_046654920.1|177998_178214_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024198083.1|178540_178927_-	hypothetical protein	NA	H6WRY2	Salmonella_phage	85.1	3.7e-17
WP_046654921.1|179342_179987_-	hypothetical protein	NA	A0A125RNQ8	Pseudomonas_phage	51.6	5.4e-05
WP_042919262.1|179983_180211_-	hypothetical protein	NA	A9YWV3	Burkholderia_phage	48.1	2.5e-10
WP_004026413.1|180688_180877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040209848.1|180873_181371_-	hypothetical protein	NA	A0A2I6TCG8	Escherichia_phage	67.1	2.0e-23
WP_004026415.1|181463_181682_-	hypothetical protein	NA	R9TRD3	Aeromonas_phage	66.7	4.4e-20
WP_004197205.1|181847_182099_-	hypothetical protein	NA	S5MQM0	Escherichia_phage	76.7	1.9e-22
WP_004026416.1|182219_182534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026417.1|182614_182935_-	hypothetical protein	NA	J9Q750	Salmonella_phage	50.9	2.2e-28
>prophage 3
NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	361964	206762	213954	361964		Burkholderia_phage(33.33%)	10	NA	NA
WP_004883140.1|206762_207965_+	type II restriction endonuclease	NA	E5E3X4	Burkholderia_phage	37.7	1.8e-33
WP_004883137.1|208054_209470_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.9	3.1e-106
WP_004026464.1|209596_210340_-	DNA replication protein DnaC	NA	V5UQI5	Shigella_phage	49.6	1.8e-60
WP_004196690.1|210336_210771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004026466.1|210803_211064_-	hypothetical protein	NA	A0A0M3LSW2	Mannheimia_phage	41.0	5.9e-11
WP_004026468.1|211317_211761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004196726.1|211991_212351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040120493.1|212535_212946_-	hypothetical protein	NA	Q71TH9	Escherichia_phage	60.8	4.6e-42
WP_004181824.1|213070_213385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196710.1|213375_213954_-	HNH endonuclease	NA	W0LI46	Edwardsiella_phage	57.6	1.2e-40
>prophage 4
NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	361964	264386	315922	361964	transposase,integrase	Enterobacteria_phage(25.0%)	50	269824:269839	301006:301021
WP_025368604.1|264386_265613_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	76.6	6.2e-143
WP_040120489.1|265649_266075_+|transposase	IS200/IS605 family transposase	transposase	I4AZM1	Saccharomonospora_phage	51.5	1.8e-33
WP_042935575.1|266360_267587_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	79.3	1.7e-156
WP_004181778.1|267816_268101_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	59.1	4.7e-22
WP_025368601.1|268090_268339_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_042935572.1|268629_270429_+	ATP-dependent helicase	NA	E3T5J8	Cafeteria_roenbergensis_virus	25.6	3.3e-28
269824:269839	attL	AGAAAAGTTACTTTTC	NA	NA	NA	NA
WP_046654939.1|270762_271758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181774.1|271902_272256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654940.1|272317_273139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004186944.1|273166_274219_+	AAA domain-containing protein	NA	NA	NA	NA	NA
WP_004026538.1|274312_275389_+	DUF3150 domain-containing protein	NA	NA	NA	NA	NA
WP_071844669.1|276703_277480_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_004181768.1|277551_277782_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654942.1|277892_279137_+	topoisomerase	NA	A0A0H5AWB1	Pseudomonas_phage	25.5	1.4e-09
WP_004181766.1|279205_279745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181765.1|279889_280108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004026547.1|280695_280938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181762.1|280985_281450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024198103.1|281459_281867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042934803.1|281909_282869_+	DNA replication protein	NA	NA	NA	NA	NA
WP_042934801.1|282865_283624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042934798.1|283620_283944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042934796.1|284094_284412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014386529.1|284477_285614_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_021529705.1|287553_290559_-|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.9	0.0e+00
WP_001235713.1|290722_291280_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
WP_000027057.1|291462_292323_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_000557452.1|292464_293325_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA	NA
WP_000587836.1|293337_293631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085956516.1|293662_294821_+|transposase	IS3-like element ISKpn11 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	32.3	1.5e-18
WP_004197549.1|294887_295073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085947932.1|295964_296725_-|transposase	IS5-like element ISKpn12 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	38.8	2.0e-11
WP_004197545.1|296849_297122_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_113772118.1|297217_297502_+	hypothetical protein	NA	A0A1W6JNS2	Morganella_phage	47.0	7.1e-10
WP_000019473.1|297547_298528_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_148552480.1|298585_298846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046654943.1|300724_301528_+	hypothetical protein	NA	NA	NA	NA	NA
301006:301021	attR	AGAAAAGTTACTTTTC	NA	NA	NA	NA
WP_156652358.1|301691_302768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004186900.1|302928_303813_-	hypothetical protein	NA	J9Q7H0	Salmonella_phage	43.2	2.6e-50
WP_001067855.1|303924_304629_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_113772119.1|304605_304971_+	hypothetical protein	NA	A0A1B0VDR3	Salmonella_phage	100.0	3.8e-40
WP_000239590.1|305226_306102_+	class A extended-spectrum beta-lactamase CTX-M-15	NA	A0A1B0VBP7	Salmonella_phage	82.4	1.1e-125
WP_001393253.1|306148_306481_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
WP_001067855.1|308802_309507_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_002063889.1|310700_311243_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000557452.1|311255_312116_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA	NA
WP_001067855.1|312222_312927_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001334766.1|313558_314389_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA	NA
WP_063840321.1|314519_315074_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001067855.1|315217_315922_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
