assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000981545.1_Y1	NZ_LN829119	Candidatus Filomicrobium marinum strain strain Y chromosome 1	1	576837-577179	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3	Orphan	CAACGGACGAACGTCCGAAGGAA	23	0	0	NA	NA	NA	6	6	Orphan	csa3,DEDDh,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3	NA|102aa|up_6|NZ_LN829119.1_571365_571671_+,NA|359aa|up_5|NZ_LN829119.1_571663_572740_+,NA|116aa|up_1|NZ_LN829119.1_575624_575972_-,NA|74aa|down_0|NZ_LN829119.1_577963_578185_-,NA|82aa|down_1|NZ_LN829119.1_578189_578435_-,NA|108aa|down_2|NZ_LN829119.1_578431_578755_-,NA|85aa|down_3|NZ_LN829119.1_578747_579002_-,NA|61aa|down_4|NZ_LN829119.1_578979_579162_-,NA|79aa|down_5|NZ_LN829119.1_579161_579398_-,NA|130aa|down_6|NZ_LN829119.1_579983_580373_-	NA|202aa|up_9|NZ_LN829119.1_569308_569914_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|140aa|up_8|NZ_LN829119.1_570020_570440_+	pfam02643, DUF192, Uncharacterized ACR, COG1430	NA|102aa|up_7|NZ_LN829119.1_570738_571044_+	pfam04800, ETC_C1_NDUFA4, ETC complex I subunit conserved region	NA|102aa|up_6|NZ_LN829119.1_571365_571671_+	NA	NA|359aa|up_5|NZ_LN829119.1_571663_572740_+	NA	NA|139aa|up_4|NZ_LN829119.1_572779_573196_-	COG2361, COG2361, Uncharacterized conserved protein [Function unknown]	NA|99aa|up_3|NZ_LN829119.1_573197_573494_-	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|350aa|up_2|NZ_LN829119.1_574484_575534_-	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|116aa|up_1|NZ_LN829119.1_575624_575972_-	NA	NA|245aa|up_0|NZ_LN829119.1_576040_576775_-	cd02042, ParAB_family, partition proteins ParAB family	NA|74aa|down_0|NZ_LN829119.1_577963_578185_-	NA	NA|82aa|down_1|NZ_LN829119.1_578189_578435_-	NA	NA|108aa|down_2|NZ_LN829119.1_578431_578755_-	NA	NA|85aa|down_3|NZ_LN829119.1_578747_579002_-	NA	NA|61aa|down_4|NZ_LN829119.1_578979_579162_-	NA	NA|79aa|down_5|NZ_LN829119.1_579161_579398_-	NA	NA|130aa|down_6|NZ_LN829119.1_579983_580373_-	NA	NA|181aa|down_7|NZ_LN829119.1_580353_580896_-	pfam02464, CinA, Competence-damaged protein	NA|164aa|down_8|NZ_LN829119.1_580892_581384_-	cd07909, YciF, YciF bacterial stress response protein, ferritin-like iron-binding domain	NA|249aa|down_9|NZ_LN829119.1_581793_582540_-	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)
GCF_000981545.1_Y1	NZ_LN829119	Candidatus Filomicrobium marinum strain strain Y chromosome 1	2	3470363-3472099	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3	csa3,DEDDh,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3	Type I-A, Type I-E?	GGGTCGATCTCCGCGTGGGCGGAGGAGCC,GGGTCGATCTCCGCGTGGGCGGAGGAGCC,GGGTCGATCTCCGCGTGGGCGGAGGAGCC	29,29,29	0	0	NA	NA	NA:NA:NA	28,28,27	28	TypeI-A,TypeI-E?	csa3,DEDDh,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3	NA|57aa|up_7|NZ_LN829119.1_3460689_3460860_-,NA|165aa|up_3|NZ_LN829119.1_3466927_3467422_+,NA|144aa|up_2|NZ_LN829119.1_3467532_3467964_+,NA	NA|376aa|up_9|NZ_LN829119.1_3457469_3458597_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|607aa|up_8|NZ_LN829119.1_3458767_3460588_-	cd10278, PQQ_MDH, Large subunit of methanol dehydrogenase (moxF)	NA|57aa|up_7|NZ_LN829119.1_3460689_3460860_-	NA	NA|411aa|up_6|NZ_LN829119.1_3461621_3462854_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|1132aa|up_5|NZ_LN829119.1_3462913_3466309_-	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family	NA|82aa|up_4|NZ_LN829119.1_3466625_3466871_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|165aa|up_3|NZ_LN829119.1_3466927_3467422_+	NA	NA|144aa|up_2|NZ_LN829119.1_3467532_3467964_+	NA	NA|118aa|up_1|NZ_LN829119.1_3468530_3468884_+	pfam05713, MobC, Bacterial mobilisation protein (MobC)	NA|412aa|up_0|NZ_LN829119.1_3468883_3470119_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	cas2|102aa|down_0|NZ_LN829119.1_3472147_3472453_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|321aa|down_1|NZ_LN829119.1_3472455_3473418_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|279aa|down_2|NZ_LN829119.1_3473422_3474259_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|268aa|down_3|NZ_LN829119.1_3474255_3475059_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|406aa|down_4|NZ_LN829119.1_3475061_3476279_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|221aa|down_5|NZ_LN829119.1_3476275_3476938_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas3|884aa|down_6|NZ_LN829119.1_3478521_3481173_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|609aa|down_7|NZ_LN829119.1_3481619_3483446_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|208aa|down_8|NZ_LN829119.1_3483361_3483985_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|194aa|down_9|NZ_LN829119.1_3484046_3484628_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
