assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000980835.1_ASM98083v1	NZ_CP011312	Corynebacterium kutscheri strain DSM 20755 chromosome, complete genome	1	901149-901665	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	8,8,7	8	TypeI-E	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|196aa|up_0|NZ_CP011312.1_900391_900979_-,NA|233aa|down_1|NZ_CP011312.1_903870_904569_+,NA|84aa|down_3|NZ_CP011312.1_904874_905126_+,NA|63aa|down_4|NZ_CP011312.1_905394_905583_-	NA|531aa|up_9|NZ_CP011312.1_889488_891081_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|339aa|up_8|NZ_CP011312.1_891230_892247_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|262aa|up_7|NZ_CP011312.1_892298_893084_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|317aa|up_6|NZ_CP011312.1_893086_894037_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|347aa|up_5|NZ_CP011312.1_894225_895266_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|371aa|up_4|NZ_CP011312.1_895271_896384_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|266aa|up_3|NZ_CP011312.1_896675_897473_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|375aa|up_2|NZ_CP011312.1_897573_898698_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|497aa|up_1|NZ_CP011312.1_898761_900252_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|196aa|up_0|NZ_CP011312.1_900391_900979_-	NA	NA|341aa|down_0|NZ_CP011312.1_901903_902926_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|233aa|down_1|NZ_CP011312.1_903870_904569_+	NA	NA|80aa|down_2|NZ_CP011312.1_904651_904891_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|down_3|NZ_CP011312.1_904874_905126_+	NA	NA|63aa|down_4|NZ_CP011312.1_905394_905583_-	NA	cas2|115aa|down_5|NZ_CP011312.1_906007_906352_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas6e|220aa|down_6|NZ_CP011312.1_907330_907990_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_7|NZ_CP011312.1_907989_908691_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|378aa|down_8|NZ_CP011312.1_908687_909821_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_9|NZ_CP011312.1_909869_910502_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)
GCF_000980835.1_ASM98083v1	NZ_CP011312	Corynebacterium kutscheri strain DSM 20755 chromosome, complete genome	2	903370-903443	2	CRISPRCasFinder	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	ATCCCCGCTCGCGCGGGGACAAC	23	0	0	NA	NA	NA	1	1	TypeI-E	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|196aa|up_1|NZ_CP011312.1_900391_900979_-,NA|233aa|down_0|NZ_CP011312.1_903870_904569_+,NA|84aa|down_2|NZ_CP011312.1_904874_905126_+,NA|63aa|down_3|NZ_CP011312.1_905394_905583_-	NA|339aa|up_9|NZ_CP011312.1_891230_892247_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|262aa|up_8|NZ_CP011312.1_892298_893084_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|317aa|up_7|NZ_CP011312.1_893086_894037_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|347aa|up_6|NZ_CP011312.1_894225_895266_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|371aa|up_5|NZ_CP011312.1_895271_896384_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|266aa|up_4|NZ_CP011312.1_896675_897473_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|375aa|up_3|NZ_CP011312.1_897573_898698_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|497aa|up_2|NZ_CP011312.1_898761_900252_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|196aa|up_1|NZ_CP011312.1_900391_900979_-	NA	NA|341aa|up_0|NZ_CP011312.1_901903_902926_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|233aa|down_0|NZ_CP011312.1_903870_904569_+	NA	NA|80aa|down_1|NZ_CP011312.1_904651_904891_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|down_2|NZ_CP011312.1_904874_905126_+	NA	NA|63aa|down_3|NZ_CP011312.1_905394_905583_-	NA	cas2|115aa|down_4|NZ_CP011312.1_906007_906352_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas6e|220aa|down_5|NZ_CP011312.1_907330_907990_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_6|NZ_CP011312.1_907989_908691_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|378aa|down_7|NZ_CP011312.1_908687_909821_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_8|NZ_CP011312.1_909869_910502_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|550aa|down_9|NZ_CP011312.1_910482_912132_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)
GCF_000980835.1_ASM98083v1	NZ_CP011312	Corynebacterium kutscheri strain DSM 20755 chromosome, complete genome	3	905753-905963	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-E	GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC,GGAACATCCCCGCTCGCGCGGGGACAAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	TypeI-E	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|196aa|up_5|NZ_CP011312.1_900391_900979_-,NA|233aa|up_3|NZ_CP011312.1_903870_904569_+,NA|84aa|up_1|NZ_CP011312.1_904874_905126_+,NA|63aa|up_0|NZ_CP011312.1_905394_905583_-,NA	NA|371aa|up_9|NZ_CP011312.1_895271_896384_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|266aa|up_8|NZ_CP011312.1_896675_897473_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|375aa|up_7|NZ_CP011312.1_897573_898698_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|497aa|up_6|NZ_CP011312.1_898761_900252_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|196aa|up_5|NZ_CP011312.1_900391_900979_-	NA	NA|341aa|up_4|NZ_CP011312.1_901903_902926_+	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|233aa|up_3|NZ_CP011312.1_903870_904569_+	NA	NA|80aa|up_2|NZ_CP011312.1_904651_904891_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|84aa|up_1|NZ_CP011312.1_904874_905126_+	NA	NA|63aa|up_0|NZ_CP011312.1_905394_905583_-	NA	cas2|115aa|down_0|NZ_CP011312.1_906007_906352_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas6e|220aa|down_1|NZ_CP011312.1_907330_907990_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_2|NZ_CP011312.1_907989_908691_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|378aa|down_3|NZ_CP011312.1_908687_909821_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_4|NZ_CP011312.1_909869_910502_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|550aa|down_5|NZ_CP011312.1_910482_912132_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|954aa|down_6|NZ_CP011312.1_912225_915087_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|182aa|down_7|NZ_CP011312.1_915615_916161_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|135aa|down_8|NZ_CP011312.1_916117_916522_+	pfam07739, TipAS, TipAS antibiotic-recognition domain	NA|731aa|down_9|NZ_CP011312.1_917015_919208_-	COG1511, COG1511, Predicted membrane protein [Function unknown]
GCF_000980835.1_ASM98083v1	NZ_CP011312	Corynebacterium kutscheri strain DSM 20755 chromosome, complete genome	4	1877364-1877940	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Orphan	GTTGTCCCCGCTCGCGCGGGGATGTTCC,GTTGTCCCCGCTCGCGCGGGGATGTTCC,GTTGTCCCCGCTCGCGCGGGGATGTTCC	28,28,28	0	0	NA	NA	NA:NA:NA	9,9,9	9	Orphan	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|63aa|up_3|NZ_CP011312.1_1862268_1862457_-,NA|100aa|down_0|NZ_CP011312.1_1878109_1878409_-	NA|484aa|up_9|NZ_CP011312.1_1856430_1857882_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|246aa|up_8|NZ_CP011312.1_1858118_1858856_-	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|272aa|up_7|NZ_CP011312.1_1858865_1859681_+	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase	NA|198aa|up_6|NZ_CP011312.1_1859744_1860338_+	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|129aa|up_5|NZ_CP011312.1_1860489_1860876_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|200aa|up_4|NZ_CP011312.1_1861492_1862092_+	pfam06737, Transglycosylas, Transglycosylase-like domain	NA|63aa|up_3|NZ_CP011312.1_1862268_1862457_-	NA	NA|729aa|up_2|NZ_CP011312.1_1862523_1864710_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|564aa|up_1|NZ_CP011312.1_1864809_1866501_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|212aa|up_0|NZ_CP011312.1_1866510_1867146_+	pfam11580, DUF3239, Protein of unknown function (DUF3239)	NA|100aa|down_0|NZ_CP011312.1_1878109_1878409_-	NA	NA|252aa|down_1|NZ_CP011312.1_1878408_1879164_-	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]	NA|356aa|down_2|NZ_CP011312.1_1879160_1880228_-	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|332aa|down_3|NZ_CP011312.1_1880220_1881216_-	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|337aa|down_4|NZ_CP011312.1_1881314_1882325_-	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|361aa|down_5|NZ_CP011312.1_1882642_1883725_+	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]	NA|248aa|down_6|NZ_CP011312.1_1883721_1884465_-	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins	NA|523aa|down_7|NZ_CP011312.1_1885441_1887010_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)	NA|387aa|down_8|NZ_CP011312.1_1887006_1888167_+	cd17268, RMtype1_S_Ara36733I_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|1042aa|down_9|NZ_CP011312.1_1888163_1891289_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
GCF_000980835.1_ASM98083v1	NZ_CP011312	Corynebacterium kutscheri strain DSM 20755 chromosome, complete genome	5	2051969-2052039	5	CRISPRCasFinder	no	csa3	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	Type I-A	CCAGAACCATGACATACCTGGCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	NA|84aa|up_4|NZ_CP011312.1_2046108_2046360_+,NA|347aa|down_5|NZ_CP011312.1_2060978_2062019_+	csa3|123aa|up_9|NZ_CP011312.1_2040853_2041222_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|635aa|up_8|NZ_CP011312.1_2041218_2043123_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|275aa|up_7|NZ_CP011312.1_2043151_2043976_+	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]	NA|370aa|up_6|NZ_CP011312.1_2043994_2045104_+	cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant	NA|273aa|up_5|NZ_CP011312.1_2045167_2045986_-	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|84aa|up_4|NZ_CP011312.1_2046108_2046360_+	NA	NA|407aa|up_3|NZ_CP011312.1_2046373_2047594_+	pfam06259, Abhydrolase_8, Alpha/beta hydrolase	NA|345aa|up_2|NZ_CP011312.1_2047693_2048728_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|507aa|up_1|NZ_CP011312.1_2048945_2050466_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|134aa|up_0|NZ_CP011312.1_2050939_2051341_-	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|213aa|down_0|NZ_CP011312.1_2052834_2053473_-	PRK14164, PRK14164, heat shock protein GrpE; Provisional	NA|610aa|down_1|NZ_CP011312.1_2053435_2055265_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|448aa|down_2|NZ_CP011312.1_2055768_2057112_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|412aa|down_3|NZ_CP011312.1_2057208_2058444_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|665aa|down_4|NZ_CP011312.1_2058954_2060949_+	pfam04213, HtaA, Htaa	NA|347aa|down_5|NZ_CP011312.1_2060978_2062019_+	NA	NA|853aa|down_6|NZ_CP011312.1_2062110_2064669_-	pfam17961, Big_8, Bacterial Ig domain	NA|615aa|down_7|NZ_CP011312.1_2065134_2066979_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|534aa|down_8|NZ_CP011312.1_2067361_2068963_-	pfam01384, PHO4, Phosphate transporter family	NA|174aa|down_9|NZ_CP011312.1_2069463_2069985_+	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial
