assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000973085.1_ASM97308v1	NZ_CP011280	Sneathia amnii strain SN35 chromosome, complete genome	1	6276-6367	1	CRISPRCasFinder	no		RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	Orphan	AGTAAAAAAAGAAGAACCAAAACCAAAACCAA	32	0	0	NA	NA	NA	1	1	Orphan	RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	NA|270aa|up_1|NZ_CP011280.1_2638_3448_+,NA|122aa|down_8|NZ_CP011280.1_15346_15712_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|463aa|up_4|NZ_CP011280.1_12_1401_+	PRK00149, dnaA, chromosomal replication initiator protein DnaA	NA|68aa|up_3|NZ_CP011280.1_1402_1606_+	pfam13275, S4_2, S4 domain	NA|348aa|up_2|NZ_CP011280.1_1605_2649_+	COG1195, RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]	NA|270aa|up_1|NZ_CP011280.1_2638_3448_+	NA	NA|893aa|up_0|NZ_CP011280.1_3431_6110_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|82aa|down_0|NZ_CP011280.1_6665_6911_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|408aa|down_1|NZ_CP011280.1_8097_9321_-	PRK12383, PRK12383, putative mutase; Provisional	NA|381aa|down_2|NZ_CP011280.1_9313_10456_-	cd06811, PLPDE_III_yhfX_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme yhfX	NA|368aa|down_3|NZ_CP011280.1_10458_11562_-	pfam00266, Aminotran_5, Aminotransferase class-V	NA|408aa|down_4|NZ_CP011280.1_11569_12793_-	PRK03642, PRK03642, putative periplasmic esterase; Provisional	NA|292aa|down_5|NZ_CP011280.1_12803_13679_-	PRK09875, PRK09875, phosphotriesterase-related protein	NA|435aa|down_6|NZ_CP011280.1_13689_14994_-	pfam10797, YhfT, Protein of unknown function	NA|120aa|down_7|NZ_CP011280.1_14990_15350_-	pfam10941, DUF2620, Protein of unknown function DUF2620	NA|122aa|down_8|NZ_CP011280.1_15346_15712_-	NA	NA|303aa|down_9|NZ_CP011280.1_15761_16670_-	pfam14503, YhfZ_C, YhfZ C-terminal domain
GCF_000973085.1_ASM97308v1	NZ_CP011280	Sneathia amnii strain SN35 chromosome, complete genome	2	96177-96265	2	CRISPRCasFinder	no		RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	Orphan	TAATAAAGTATACCACTAAAAAA	23	0	0	NA	NA	NA	1	1	Orphan	RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	NA|79aa|up_9|NZ_CP011280.1_88134_88371_+,NA|67aa|down_0|NZ_CP011280.1_96277_96478_-,NA|357aa|down_1|NZ_CP011280.1_96477_97548_-	NA|79aa|up_9|NZ_CP011280.1_88134_88371_+	NA	NA|234aa|up_8|NZ_CP011280.1_88697_89399_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|389aa|up_7|NZ_CP011280.1_89628_90795_+	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085	NA|282aa|up_6|NZ_CP011280.1_90921_91767_-	COG2100, COG2100, Predicted Fe-S oxidoreductase [General function prediction only]	NA|106aa|up_5|NZ_CP011280.1_91759_92077_-	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|459aa|up_4|NZ_CP011280.1_92086_93463_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|216aa|up_3|NZ_CP011280.1_93473_94121_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|134aa|up_2|NZ_CP011280.1_94122_94524_-	pfam11687, DUF3284, Domain of unknown function (DUF3284)	NA|438aa|up_1|NZ_CP011280.1_94525_95839_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|102aa|up_0|NZ_CP011280.1_95843_96149_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|67aa|down_0|NZ_CP011280.1_96277_96478_-	NA	NA|357aa|down_1|NZ_CP011280.1_96477_97548_-	NA	NA|219aa|down_2|NZ_CP011280.1_97673_98330_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|626aa|down_3|NZ_CP011280.1_98319_100197_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|597aa|down_4|NZ_CP011280.1_100454_102245_+	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN	NA|601aa|down_5|NZ_CP011280.1_102410_104213_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|431aa|down_6|NZ_CP011280.1_104547_105840_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|124aa|down_7|NZ_CP011280.1_106101_106473_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|down_8|NZ_CP011280.1_106488_106959_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|693aa|down_9|NZ_CP011280.1_106976_109055_+	PRK00007, PRK00007, elongation factor G; Reviewed
GCF_000973085.1_ASM97308v1	NZ_CP011280	Sneathia amnii strain SN35 chromosome, complete genome	3	588428-589278	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas12a,cas4,cas1,cas2	RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	Type V-A	TATTTGAAAGCATCTTTTAATTTCTACTATTGTAGAT,ATTTGAAAGCATNTTTTAATTTCTACTATTGTAGAT,ATTTGGAAGCATATTTTAATTTCTACTATTGTAGAT	37,36,36	0	0	NA	NA	NA:NA:NA	13,13,4	13	TypeV-A	RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	NA|189aa|up_7|NZ_CP011280.1_580839_581406_+,NA|64aa|up_6|NZ_CP011280.1_581457_581649_-,NA|170aa|up_5|NZ_CP011280.1_581770_582280_-,NA|70aa|down_1|NZ_CP011280.1_592389_592599_+,NA|84aa|down_2|NZ_CP011280.1_592595_592847_+,NA|65aa|down_3|NZ_CP011280.1_592908_593103_+,NA|68aa|down_4|NZ_CP011280.1_593148_593352_+,NA|67aa|down_5|NZ_CP011280.1_593908_594109_-,NA|321aa|down_9|NZ_CP011280.1_597895_598858_-	NA|192aa|up_9|NZ_CP011280.1_579588_580164_+	cd13926, N-acetylmuramidase_GH108, N-acetylmuramidase domain of the glycosyl hydrolase 108 family	NA|110aa|up_8|NZ_CP011280.1_580168_580498_+	COG3280, TreY, Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]	NA|189aa|up_7|NZ_CP011280.1_580839_581406_+	NA	NA|64aa|up_6|NZ_CP011280.1_581457_581649_-	NA	NA|170aa|up_5|NZ_CP011280.1_581770_582280_-	NA	NA|304aa|up_4|NZ_CP011280.1_582297_583209_-	pfam13475, DUF4116, Domain of unknown function (DUF4116)	cas12a|1000aa|up_3|NZ_CP011280.1_583446_586446_+	TIGR04330, conserved_hypothetical_protein, CRISPR-associated protein Cpf1, subtype PREFRAN	cas4|186aa|up_2|NZ_CP011280.1_586450_587008_+	TIGR04328, hypothetical_protein_HMPREF9709_01098, CRISPR-associated protein Cas4, subtype PREFRAN	cas1|331aa|up_1|NZ_CP011280.1_587004_587997_+	TIGR04329, hypothetical_protein_SbacW_07302_partial, CRISPR-associated endonuclease Cas1, subtype PREFRAN	cas2|91aa|up_0|NZ_CP011280.1_588001_588274_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|466aa|down_0|NZ_CP011280.1_589863_591261_+	PRK00448, polC, DNA polymerase III PolC; Validated	NA|70aa|down_1|NZ_CP011280.1_592389_592599_+	NA	NA|84aa|down_2|NZ_CP011280.1_592595_592847_+	NA	NA|65aa|down_3|NZ_CP011280.1_592908_593103_+	NA	NA|68aa|down_4|NZ_CP011280.1_593148_593352_+	NA	NA|67aa|down_5|NZ_CP011280.1_593908_594109_-	NA	NA|580aa|down_6|NZ_CP011280.1_594144_595884_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|561aa|down_7|NZ_CP011280.1_595873_597556_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|59aa|down_8|NZ_CP011280.1_597687_597864_+	pfam04024, PspC, PspC domain	NA|321aa|down_9|NZ_CP011280.1_597895_598858_-	NA
GCF_000973085.1_ASM97308v1	NZ_CP011280	Sneathia amnii strain SN35 chromosome, complete genome	4	1173037-1173127	4	CRISPRCasFinder	no		RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	Orphan	TTCGAGGGACATTTCGAGGGACAT	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas14j,cas12a,cas4,cas1,cas2,DEDDh,DinG,cas3	NA,NA	NA|659aa|up_9|NZ_CP011280.1_1158163_1160140_-	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|123aa|up_8|NZ_CP011280.1_1160359_1160728_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|370aa|up_7|NZ_CP011280.1_1160728_1161838_-	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|589aa|up_6|NZ_CP011280.1_1161809_1163576_-	PRK05667, dnaG, DNA primase; Validated	NA|61aa|up_5|NZ_CP011280.1_1163632_1163815_-	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6	NA|188aa|up_4|NZ_CP011280.1_1163801_1164365_-	PRK00300, gmk, guanylate kinase; Provisional	NA|1324aa|up_3|NZ_CP011280.1_1164405_1168377_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1146aa|up_2|NZ_CP011280.1_1168391_1171829_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|123aa|up_1|NZ_CP011280.1_1171968_1172337_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|162aa|up_0|NZ_CP011280.1_1172369_1172855_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|466aa|down_0|NZ_CP011280.1_1173207_1174605_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|323aa|down_1|NZ_CP011280.1_1174625_1175594_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|406aa|down_2|NZ_CP011280.1_1175593_1176811_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|358aa|down_3|NZ_CP011280.1_1176923_1177997_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|268aa|down_4|NZ_CP011280.1_1178064_1178868_+	TIGR01533, Lipoprotein_E, 5'-nucleotidase, lipoprotein e(P4) family	NA|147aa|down_5|NZ_CP011280.1_1178894_1179335_-	pfam05014, Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase	NA|409aa|down_6|NZ_CP011280.1_1179336_1180563_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|337aa|down_7|NZ_CP011280.1_1180636_1181647_-	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|285aa|down_8|NZ_CP011280.1_1181711_1182566_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|835aa|down_9|NZ_CP011280.1_1182565_1185070_-	TIGR03599, YloV, DAK2 domain fusion protein YloV
