assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000970665.2_ASM97066v2	NZ_CP017295	Streptococcus gordonii strain IE35, complete genome	1	1619972-1620863	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Type II-A,Type II-C,Type II-B	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	13,13,11	13	TypeII-A,TypeII-C,TypeII-B	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA,NA	NA|428aa|up_9|NZ_CP017295.1_1608459_1609743_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|305aa|up_8|NZ_CP017295.1_1609880_1610795_-	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|113aa|up_7|NZ_CP017295.1_1610910_1611249_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|369aa|up_6|NZ_CP017295.1_1611266_1612373_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|389aa|up_5|NZ_CP017295.1_1612389_1613556_-	PRK05382, PRK05382, chorismate synthase; Validated	NA|356aa|up_4|NZ_CP017295.1_1613644_1614712_-	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|286aa|up_3|NZ_CP017295.1_1614789_1615647_-	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|226aa|up_2|NZ_CP017295.1_1615636_1616314_-	PRK02412, aroD, type I 3-dehydroquinate dehydratase	NA|388aa|up_1|NZ_CP017295.1_1616310_1617474_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|733aa|up_0|NZ_CP017295.1_1617714_1619913_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	csn2|348aa|down_0|NZ_CP017295.1_1620932_1621976_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NZ_CP017295.1_1621972_1622296_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|303aa|down_2|NZ_CP017295.1_1622300_1623209_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1137aa|down_3|NZ_CP017295.1_1623380_1626791_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|116aa|down_4|NZ_CP017295.1_1627196_1627544_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|109aa|down_5|NZ_CP017295.1_1627659_1627986_-	PRK14229, PRK14229, fluoride efflux transporter CrcB	NA|125aa|down_6|NZ_CP017295.1_1627982_1628357_-	PRK14221, PRK14221, fluoride efflux transporter CrcB	NA|89aa|down_7|NZ_CP017295.1_1628353_1628620_-	PRK07248, PRK07248, chorismate mutase	NA|461aa|down_8|NZ_CP017295.1_1629044_1630427_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|766aa|down_9|NZ_CP017295.1_1630617_1632915_-	TIGR02104, pulA_typeI, pullulanase, type I
GCF_000970665.2_ASM97066v2	NZ_CP017295	Streptococcus gordonii strain IE35, complete genome	2	1848224-1848368	2	CRISPRCasFinder	no		cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Orphan	CAACCTAAAAATGTCTCCCAGAC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA|83aa|up_8|NZ_CP017295.1_1836445_1836694_-,NA	NA|249aa|up_9|NZ_CP017295.1_1835667_1836414_-	pfam02517, Abi, CAAX protease self-immunity	NA|83aa|up_8|NZ_CP017295.1_1836445_1836694_-	NA	NA|515aa|up_7|NZ_CP017295.1_1837008_1838553_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|899aa|up_6|NZ_CP017295.1_1839096_1841793_-	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp	NA|129aa|up_5|NZ_CP017295.1_1842013_1842400_-	pfam09148, DUF1934, Domain of unknown function (DUF1934)	NA|434aa|up_4|NZ_CP017295.1_1842504_1843806_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|270aa|up_3|NZ_CP017295.1_1843807_1844617_+	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|410aa|up_2|NZ_CP017295.1_1844601_1845831_+	pfam02388, FemAB, FemAB family	NA|412aa|up_1|NZ_CP017295.1_1845845_1847081_+	pfam02388, FemAB, FemAB family	NA|219aa|up_0|NZ_CP017295.1_1847149_1847806_-	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain	NA|237aa|down_0|NZ_CP017295.1_1848372_1849083_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|255aa|down_1|NZ_CP017295.1_1849082_1849847_-	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|318aa|down_2|NZ_CP017295.1_1849846_1850800_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|290aa|down_3|NZ_CP017295.1_1850803_1851673_-	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|389aa|down_4|NZ_CP017295.1_1851831_1852998_-	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|90aa|down_5|NZ_CP017295.1_1853087_1853357_-	PRK02302, PRK02302, hypothetical protein; Provisional	NA|197aa|down_6|NZ_CP017295.1_1853434_1854025_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|210aa|down_7|NZ_CP017295.1_1854226_1854856_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|887aa|down_8|NZ_CP017295.1_1854953_1857614_-	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA	NA|389aa|down_9|NZ_CP017295.1_1858124_1859291_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
GCF_000970665.2_ASM97066v2	NZ_CP017295	Streptococcus gordonii strain IE35, complete genome	3	1977571-1977643	3	CRISPRCasFinder	no		cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Orphan	AAATAAGTTTCCGTGAGAACTAT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA,NA|190aa|down_0|NZ_CP017295.1_1977806_1978376_-,NA|175aa|down_3|NZ_CP017295.1_1979983_1980508_-	NA|262aa|up_9|NZ_CP017295.1_1965756_1966542_-	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|273aa|up_8|NZ_CP017295.1_1966543_1967362_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|329aa|up_7|NZ_CP017295.1_1967363_1968350_-	COG4586, COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|294aa|up_6|NZ_CP017295.1_1968642_1969524_-	PRK07315, PRK07315, fructose-bisphosphate aldolase; Provisional	NA|137aa|up_5|NZ_CP017295.1_1969930_1970341_-	pfam14526, Cass2, Integron-associated effector binding protein	NA|538aa|up_4|NZ_CP017295.1_1970411_1972025_-	PRK05380, pyrG, CTP synthetase; Validated	NA|315aa|up_3|NZ_CP017295.1_1972466_1973411_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|586aa|up_2|NZ_CP017295.1_1973571_1975329_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|589aa|up_1|NZ_CP017295.1_1975318_1977085_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|153aa|up_0|NZ_CP017295.1_1977077_1977536_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|190aa|down_0|NZ_CP017295.1_1977806_1978376_-	NA	NA|137aa|down_1|NZ_CP017295.1_1978384_1978795_-	PRK09218, PRK09218, peptide deformylase; Validated	NA|300aa|down_2|NZ_CP017295.1_1978843_1979743_-	pfam00480, ROK, ROK family	NA|175aa|down_3|NZ_CP017295.1_1979983_1980508_-	NA	NA|604aa|down_4|NZ_CP017295.1_1980623_1982435_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|308aa|down_5|NZ_CP017295.1_1982761_1983685_-	pfam18710, ComR_TPR, ComR tetratricopeptide	NA|462aa|down_6|NZ_CP017295.1_1983788_1985174_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|428aa|down_7|NZ_CP017295.1_1985307_1986591_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|545aa|down_8|NZ_CP017295.1_1986600_1988235_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|205aa|down_9|NZ_CP017295.1_1988231_1988846_-	COG5578, COG5578, Predicted integral membrane protein [Function unknown]
GCF_000970665.2_ASM97066v2	NZ_CP017295	Streptococcus gordonii strain IE35, complete genome	4	2128070-2128157	4	CRISPRCasFinder	no		cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Orphan	AAACTGACATTTTGTCAGTTTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA|571aa|up_6|NZ_CP017295.1_2121436_2123149_-,NA|333aa|up_5|NZ_CP017295.1_2123226_2124225_+,NA|272aa|up_4|NZ_CP017295.1_2124196_2125012_+,NA|156aa|up_3|NZ_CP017295.1_2125014_2125482_+,NA|537aa|up_1|NZ_CP017295.1_2125800_2127411_-,NA	NA|311aa|up_9|NZ_CP017295.1_2115076_2116009_-	smart00978, Tim44, Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane	NA|354aa|up_8|NZ_CP017295.1_2116059_2117121_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|944aa|up_7|NZ_CP017295.1_2117272_2120104_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|571aa|up_6|NZ_CP017295.1_2121436_2123149_-	NA	NA|333aa|up_5|NZ_CP017295.1_2123226_2124225_+	NA	NA|272aa|up_4|NZ_CP017295.1_2124196_2125012_+	NA	NA|156aa|up_3|NZ_CP017295.1_2125014_2125482_+	NA	NA|65aa|up_2|NZ_CP017295.1_2125606_2125801_-	pfam07853, DUF1648, Protein of unknown function (DUF1648)	NA|537aa|up_1|NZ_CP017295.1_2125800_2127411_-	NA	NA|238aa|up_0|NZ_CP017295.1_2127337_2128051_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|205aa|down_0|NZ_CP017295.1_2128191_2128806_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|80aa|down_1|NZ_CP017295.1_2128901_2129141_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|164aa|down_2|NZ_CP017295.1_2129179_2129671_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|97aa|down_3|NZ_CP017295.1_2129687_2129978_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|188aa|down_4|NZ_CP017295.1_2130189_2130753_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|274aa|down_5|NZ_CP017295.1_2130800_2131622_+	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]	NA|253aa|down_6|NZ_CP017295.1_2131715_2132474_-	COG1636, COG1636, Uncharacterized protein conserved in bacteria [Function unknown]	NA|541aa|down_7|NZ_CP017295.1_2132597_2134220_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|94aa|down_8|NZ_CP017295.1_2134242_2134524_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|268aa|down_9|NZ_CP017295.1_2134684_2135488_-	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]
