The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	661605	668222	3928357		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000210573.1|661605_662739_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
WP_000366564.1|662750_664001_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
WP_000543544.1|664100_664550_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_046121403.1|664575_665679_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	5.9e-44
WP_000493874.1|665683_666337_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
WP_001122865.1|666377_667487_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
WP_000864130.1|667751_668222_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
>prophage 2
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	1735693	1799578	3928357	capsid,terminase,tail,plate,integrase,portal,transposase,tRNA	Vibrio_phage(53.12%)	88	1751483:1751497	1801690:1801704
WP_046121687.1|1735693_1736653_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.1	7.4e-43
WP_071187841.1|1736683_1737238_-	DUF4875 domain-containing protein	NA	NA	NA	NA	NA
WP_000870860.1|1737913_1738309_-	DUF3465 domain-containing protein	NA	NA	NA	NA	NA
WP_080342440.1|1738343_1738502_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_032479100.1|1739271_1739667_-	DUF3465 domain-containing protein	NA	NA	NA	NA	NA
WP_158507619.1|1739834_1740572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000098716.1|1740623_1740887_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_001223794.1|1740879_1741134_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_001894429.1|1741989_1742271_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_080342443.1|1742219_1742333_-	acetyltransferase	NA	NA	NA	NA	NA
WP_046121691.1|1742389_1742746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121692.1|1742885_1743311_-	GNAT family N-acetyltransferase	NA	A0A1X9I6I8	Streptococcus_phage	25.0	3.5e-05
WP_080342631.1|1743336_1743447_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_046121693.1|1743443_1743902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121694.1|1744056_1744533_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_041051853.1|1744668_1745088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002044921.1|1745288_1745471_-	DUF645 family protein	NA	NA	NA	NA	NA
WP_001066474.1|1745764_1746601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121695.1|1746736_1747252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121696.1|1747371_1747848_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046121697.1|1747998_1748388_-	VOC family protein	NA	NA	NA	NA	NA
WP_046121698.1|1748645_1748894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080342445.1|1748933_1749059_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_080342446.1|1749398_1749524_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_002051091.1|1749975_1750464_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046122401.1|1750595_1751132_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_001245329.1|1751266_1751722_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
1751483:1751497	attL	ATGAACATGAATTGC	NA	NA	NA	NA
WP_046121699.1|1751851_1752247_-	DUF3465 domain-containing protein	NA	NA	NA	NA	NA
WP_046121700.1|1752410_1752875_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_000757220.1|1753121_1753259_-	YHYH domain-containing protein	NA	NA	NA	NA	NA
WP_046121701.1|1753476_1754526_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_046121702.1|1754518_1755250_-	response regulator	NA	NA	NA	NA	NA
WP_162484600.1|1755551_1755836_-	DUF3709 domain-containing protein	NA	NA	NA	NA	NA
WP_114755988.1|1755829_1755982_-	DUF3709 domain-containing protein	NA	NA	NA	NA	NA
WP_144407497.1|1755971_1756118_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_046121703.1|1756519_1757683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000841995.1|1757938_1758901_+|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	44.7	1.0e-63
WP_001138366.1|1758982_1759336_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_001885060.1|1759377_1759572_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001894072.1|1759675_1760227_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	35.1	9.2e-14
WP_001121787.1|1760230_1762159_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.6	2.6e-127
WP_001911595.1|1762427_1762655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000132861.1|1762779_1763451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000237646.1|1763450_1763981_-	type VI secretion system PAAR protein	NA	NA	NA	NA	NA
WP_080342451.1|1764501_1765677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121705.1|1766031_1767036_-|tail	tail protein	tail	R9TNM7	Vibrio_phage	39.5	3.1e-60
WP_046121706.1|1767026_1767233_-|tail	tail protein	tail	R9TR63	Vibrio_phage	52.2	4.5e-14
WP_000179074.1|1767216_1767612_-|tail	phage tail protein	tail	R9TMP6	Vibrio_phage	48.1	4.7e-28
WP_046121707.1|1767611_1769393_-	hypothetical protein	NA	R9TRP8	Vibrio_phage	42.1	5.9e-110
WP_052723531.1|1769496_1769799_-|tail	phage tail assembly protein	tail	Q75QK8	Wolbachia_phage	37.8	1.1e-08
WP_000896630.1|1769850_1770366_-|tail	phage major tail tube protein	tail	R9TR65	Vibrio_phage	39.1	1.9e-21
WP_046121708.1|1770365_1771460_-|tail	major tail sheath protein	tail	K4HZC3	Acidithiobacillus_phage	39.0	2.3e-80
WP_144407498.1|1771885_1772935_-	hypothetical protein	NA	H9C145	Vibrio_phage	47.6	2.5e-36
WP_046121709.1|1772936_1773494_-|tail	phage tail protein I	tail	R9TR33	Vibrio_phage	63.7	2.9e-63
WP_046121710.1|1773493_1774372_-|plate	phage baseplate protein	plate	R9TML5	Vibrio_phage	46.9	9.4e-69
WP_000993844.1|1774368_1774698_-	GPW/gp25 family protein	NA	A0A088FV58	Escherichia_phage	60.2	4.5e-32
WP_001279852.1|1774711_1775359_-|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_046121711.1|1775355_1775880_-	hypothetical protein	NA	R9TNK0	Vibrio_phage	35.3	5.1e-22
WP_046121712.1|1775872_1776478_-	hypothetical protein	NA	R9TR34	Vibrio_phage	53.7	7.9e-59
WP_046121713.1|1776440_1776791_-	hypothetical protein	NA	R9TMM0	Vibrio_phage	52.6	3.2e-28
WP_046121714.1|1776783_1777020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121715.1|1777072_1779052_-|capsid	phage major capsid protein	capsid	A0A1W6JT82	Escherichia_phage	46.8	4.9e-158
WP_046121716.1|1779008_1780577_-|portal	phage portal protein	portal	A0A088FVG5	Escherichia_phage	42.5	1.3e-116
WP_000236573.1|1780576_1781104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080342452.1|1781097_1783050_-|terminase	terminase	terminase	A2I2W6	Vibrio_virus	58.8	1.3e-211
WP_046121717.1|1783060_1783630_-	hypothetical protein	NA	B0ZSE9	Halomonas_phage	38.2	4.9e-26
WP_046121718.1|1784074_1785304_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	33.5	2.2e-55
WP_142740959.1|1785762_1786128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000731743.1|1786129_1786657_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	41.9	3.9e-30
WP_046121721.1|1786637_1786850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121722.1|1787146_1787770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046121723.1|1787763_1788786_+	DUF4868 domain-containing protein	NA	NA	NA	NA	NA
WP_052723533.1|1788856_1789441_-	Rha family transcriptional regulator	NA	A0A1C9IHV9	Salmonella_phage	61.1	7.2e-25
WP_046121724.1|1789717_1790302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121725.1|1790303_1790936_-	hypothetical protein	NA	A0A2I7RNS2	Vibrio_phage	59.7	1.6e-65
WP_046121726.1|1790935_1791355_-	hypothetical protein	NA	A0A2I7RHJ7	Vibrio_phage	29.5	1.6e-05
WP_046121727.1|1791323_1792307_-	hypothetical protein	NA	A0A067ZIA1	Vibrio_phage	48.1	1.8e-31
WP_046121728.1|1792487_1793033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_131476998.1|1793102_1793276_-	hypothetical protein	NA	R9TPV3	Vibrio_phage	78.2	4.6e-20
WP_033935861.1|1793371_1794088_+	helix-turn-helix transcriptional regulator	NA	R9TNM0	Vibrio_phage	86.1	3.1e-118
WP_000349794.1|1794235_1794505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046121729.1|1794531_1794837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139283473.1|1795141_1795300_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046121730.1|1795434_1796094_+	sce7726 family protein	NA	NA	NA	NA	NA
WP_046121731.1|1796037_1797096_-	beta family protein	NA	NA	NA	NA	NA
WP_046121732.1|1797092_1797635_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_052723534.1|1797647_1798325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046121733.1|1798387_1799578_-|integrase	site-specific integrase	integrase	I6R9B6	Salmonella_phage	33.7	3.2e-56
1801690:1801704	attR	GCAATTCATGTTCAT	NA	NA	NA	NA
>prophage 3
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	2643792	2650802	3928357		Vibrio_phage(100.0%)	9	NA	NA
WP_002029959.1|2643792_2644161_-	hypothetical protein	NA	G8IRV4	Vibrio_phage	98.3	3.3e-60
WP_052723535.1|2644232_2644484_+	hypothetical protein	NA	G8IRU4	Vibrio_phage	98.8	9.5e-43
WP_108347804.1|2644483_2645740_+	replication protein	NA	G8IRU5	Vibrio_phage	99.0	6.1e-247
WP_002029952.1|2645756_2646056_+	rstB2 protein	NA	G8IRU6	Vibrio_phage	100.0	1.6e-52
WP_000672170.1|2646323_2646533_+	hypothetical protein	NA	G8IRU8	Vibrio_phage	81.2	1.1e-20
WP_046121993.1|2646667_2648083_+	hypothetical protein	NA	G8IRU9	Vibrio_phage	68.6	2.5e-140
WP_046121994.1|2648082_2648427_+	DUF2523 domain-containing protein	NA	Q64EV1	Vibrio_phage	97.4	2.0e-59
WP_046121995.1|2648429_2649794_+	toxin	NA	G8IRV1	Vibrio_phage	97.8	1.4e-241
WP_016042361.1|2650430_2650802_-	phage protein	NA	G8IRV3	Vibrio_phage	100.0	1.1e-66
>prophage 4
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	2713888	2756318	3928357	transposase,protease	Staphylococcus_prophage(42.86%)	54	NA	NA
WP_043992422.1|2713888_2714572_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_000494051.1|2714629_2715811_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_001106209.1|2715932_2716400_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	NA	A0A2H5BH04	Vibrio_virus	64.3	4.1e-55
WP_000802768.1|2716404_2718525_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	64.7	3.5e-271
WP_046122020.1|2718987_2721774_-	nucleotide pyrophosphatase	NA	NA	NA	NA	NA
WP_046121496.1|2722424_2723465_+|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	81.2	1.5e-169
WP_001898634.1|2723716_2724256_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_000617997.1|2724427_2724724_-	Dabb family protein	NA	NA	NA	NA	NA
WP_000024294.1|2724948_2725401_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_000784954.1|2725400_2725871_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_000699012.1|2726002_2726521_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000869999.1|2726676_2726964_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000086649.1|2726960_2727242_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002044921.1|2727501_2727684_-	DUF645 family protein	NA	NA	NA	NA	NA
WP_144407500.1|2727977_2728370_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_046121687.1|2729073_2730033_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.1	7.4e-43
WP_001020574.1|2730055_2730634_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_000381184.1|2730830_2731115_+	DNA-damage-inducible protein J	NA	NA	NA	NA	NA
WP_000578475.1|2731111_2731390_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
WP_046122021.1|2731537_2731987_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000424242.1|2732122_2732611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046122022.1|2732753_2733758_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_032475742.1|2733965_2734391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000256034.1|2734661_2735096_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000451550.1|2735252_2735666_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046122023.1|2735824_2736334_-	ATPase AAA	NA	NA	NA	NA	NA
WP_046122024.1|2736470_2736974_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
WP_046121496.1|2738628_2739669_-|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	81.2	1.5e-169
WP_046122026.1|2739971_2740484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002023413.1|2740634_2741060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002053776.1|2741294_2741801_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046122430.1|2741938_2742538_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_046122027.1|2742682_2743147_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_046122028.1|2743400_2743661_-	DUF3709 domain-containing protein	NA	NA	NA	NA	NA
WP_046122029.1|2743943_2744720_-	FRG domain-containing protein	NA	NA	NA	NA	NA
WP_110168446.1|2744941_2744980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080342539.1|2744998_2745124_-	DUF645 family protein	NA	NA	NA	NA	NA
WP_000818171.1|2745436_2745739_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000861987.1|2745726_2745984_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_000703159.1|2746174_2746561_-	VOC family protein	NA	NA	NA	NA	NA
WP_080342637.1|2747658_2747781_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_046122031.1|2747777_2748275_-	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
WP_046122032.1|2748512_2749472_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.5	1.9e-43
WP_046122033.1|2749758_2750568_-	DUF4393 domain-containing protein	NA	NA	NA	NA	NA
WP_088129366.1|2750830_2750941_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_000351249.1|2750943_2751345_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_001080654.1|2751344_2751515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046122034.1|2751753_2751936_-	DUF645 family protein	NA	NA	NA	NA	NA
WP_000139834.1|2752252_2752807_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_108244118.1|2753019_2753058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001886422.1|2753073_2753202_-	DUF645 family protein	NA	NA	NA	NA	NA
WP_042981753.1|2753497_2753911_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_046122035.1|2754062_2754497_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046121687.1|2755358_2756318_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.1	7.4e-43
>prophage 5
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	3260762	3267955	3928357		Anguillid_herpesvirus(16.67%)	9	NA	NA
WP_001162850.1|3260762_3261191_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
WP_000107241.1|3261394_3262684_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.0	6.5e-34
WP_000872174.1|3262903_3263098_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124187.1|3263146_3263485_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_046122192.1|3263498_3265349_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	9.1e-106
WP_001105750.1|3265372_3265888_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000301571.1|3265936_3266260_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_000331703.1|3266320_3266704_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_000775253.1|3266740_3267955_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
>prophage 6
NZ_CP010811	Vibrio cholerae strain 1154-74 chromosome, complete genome	3928357	3501092	3508317	3928357		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_046122238.1|3501092_3501980_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	40.8	1.6e-55
WP_046122442.1|3502247_3504836_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.2	5.8e-34
WP_033928158.1|3504929_3505937_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
WP_000177559.1|3506010_3506946_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_046122239.1|3506945_3507572_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
WP_000698379.1|3507564_3508317_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
