assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	1	753473-754340	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Type III-A,Type III-D,Type III-C,Type III-B	GTTGAACTTTAACATATAATGTATTTAAAT,GTTGAACTTTAACATATAATGTATTTAAAT,GTTGAACTTTAACATATAATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	11,12,13	13	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	csx1|502aa|up_2|NZ_CP009933.1_750246_751752_+,NA|149aa|down_1|NZ_CP009933.1_755248_755695_-,NA|150aa|down_6|NZ_CP009933.1_763863_764313_+	NA|268aa|up_9|NZ_CP009933.1_742468_743272_+	pfam10997, Amj, Alternate to MurJ	cmr1gr7|372aa|up_8|NZ_CP009933.1_743976_745092_+	pfam03787, RAMPs, RAMP superfamily	cmr4gr7|345aa|up_7|NZ_CP009933.1_745094_746129_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|118aa|up_6|NZ_CP009933.1_746121_746475_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|296aa|up_5|NZ_CP009933.1_746490_747378_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cas10|585aa|up_4|NZ_CP009933.1_747391_749146_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|367aa|up_3|NZ_CP009933.1_749142_750243_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	csx1|502aa|up_2|NZ_CP009933.1_750246_751752_+	NA	cmr4gr7|298aa|up_1|NZ_CP009933.1_751744_752638_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|139aa|up_0|NZ_CP009933.1_752655_753072_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	NA|157aa|down_0|NZ_CP009933.1_754364_754835_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|149aa|down_1|NZ_CP009933.1_755248_755695_-	NA	NA|104aa|down_2|NZ_CP009933.1_756442_756754_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|185aa|down_3|NZ_CP009933.1_756874_757429_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|800aa|down_4|NZ_CP009933.1_760802_763202_+	PRK13208, valS, valyl-tRNA synthetase; Reviewed	NA|138aa|down_5|NZ_CP009933.1_763376_763790_+	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|150aa|down_6|NZ_CP009933.1_763863_764313_+	NA	NA|561aa|down_7|NZ_CP009933.1_764462_766145_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|555aa|down_8|NZ_CP009933.1_768663_770328_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	cas6|236aa|down_9|NZ_CP009933.1_770461_771169_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	2	757646-760176	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Type III-A,Type III-D,Type III-C,Type III-B	GTTGAACTTTAACATAGGATGTATTTAAAT,GTTGAACTTTAACATAGGATGTATTTAAAT,GTTGAACTTTAACATAGGATGTATTTAAAT,GTTGAACTTTAACATAGGATGTATTTAAAT	30,30,30,30	0	0	NA	NA	III-B:III-B:III-B:III-B	36,38,38,36	38	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	csx1|502aa|up_6|NZ_CP009933.1_750246_751752_+,NA|149aa|up_2|NZ_CP009933.1_755248_755695_-,NA|150aa|down_2|NZ_CP009933.1_763863_764313_+	cmr6gr7|296aa|up_9|NZ_CP009933.1_746490_747378_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cas10|585aa|up_8|NZ_CP009933.1_747391_749146_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|367aa|up_7|NZ_CP009933.1_749142_750243_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	csx1|502aa|up_6|NZ_CP009933.1_750246_751752_+	NA	cmr4gr7|298aa|up_5|NZ_CP009933.1_751744_752638_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|139aa|up_4|NZ_CP009933.1_752655_753072_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	NA|157aa|up_3|NZ_CP009933.1_754364_754835_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|149aa|up_2|NZ_CP009933.1_755248_755695_-	NA	NA|104aa|up_1|NZ_CP009933.1_756442_756754_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|185aa|up_0|NZ_CP009933.1_756874_757429_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|800aa|down_0|NZ_CP009933.1_760802_763202_+	PRK13208, valS, valyl-tRNA synthetase; Reviewed	NA|138aa|down_1|NZ_CP009933.1_763376_763790_+	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|150aa|down_2|NZ_CP009933.1_763863_764313_+	NA	NA|561aa|down_3|NZ_CP009933.1_764462_766145_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|555aa|down_4|NZ_CP009933.1_768663_770328_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	cas6|236aa|down_5|NZ_CP009933.1_770461_771169_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|251aa|down_6|NZ_CP009933.1_771438_772191_+	smart00650, rADc, Ribosomal RNA adenine dimethylases	NA|128aa|down_7|NZ_CP009933.1_772748_773132_+	cd07241, VOC_BsYyaH, vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH	NA|141aa|down_8|NZ_CP009933.1_773229_773652_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|173aa|down_9|NZ_CP009933.1_773700_774219_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	3	766433-768564	4,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cmr6gr7,cas10,cmr3gr5,csx1,cmr4gr7,cmr5gr11,cas6	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Type III-A,Type III-D,Type III-C,Type III-B	GTTGAACTTTAACATAGGATGTATTTAAAT,GTTGAACTTTAACATAGGATGTATTTAAAT,GTTGAACTTTAACATAGGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	31,32,32	32	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	NA|149aa|up_6|NZ_CP009933.1_755248_755695_-,NA|150aa|up_1|NZ_CP009933.1_763863_764313_+,NA|122aa|down_7|NZ_CP009933.1_775224_775590_+	cmr4gr7|298aa|up_9|NZ_CP009933.1_751744_752638_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|139aa|up_8|NZ_CP009933.1_752655_753072_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	NA|157aa|up_7|NZ_CP009933.1_754364_754835_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|149aa|up_6|NZ_CP009933.1_755248_755695_-	NA	NA|104aa|up_5|NZ_CP009933.1_756442_756754_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|185aa|up_4|NZ_CP009933.1_756874_757429_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|800aa|up_3|NZ_CP009933.1_760802_763202_+	PRK13208, valS, valyl-tRNA synthetase; Reviewed	NA|138aa|up_2|NZ_CP009933.1_763376_763790_+	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|150aa|up_1|NZ_CP009933.1_763863_764313_+	NA	NA|561aa|up_0|NZ_CP009933.1_764462_766145_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|555aa|down_0|NZ_CP009933.1_768663_770328_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	cas6|236aa|down_1|NZ_CP009933.1_770461_771169_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|251aa|down_2|NZ_CP009933.1_771438_772191_+	smart00650, rADc, Ribosomal RNA adenine dimethylases	NA|128aa|down_3|NZ_CP009933.1_772748_773132_+	cd07241, VOC_BsYyaH, vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH	NA|141aa|down_4|NZ_CP009933.1_773229_773652_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|173aa|down_5|NZ_CP009933.1_773700_774219_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|245aa|down_6|NZ_CP009933.1_774221_774956_-	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|122aa|down_7|NZ_CP009933.1_775224_775590_+	NA	NA|89aa|down_8|NZ_CP009933.1_775861_776128_+	pfam08765, Mor, Mor transcription activator family	NA|253aa|down_9|NZ_CP009933.1_776351_777110_+	pfam08241, Methyltransf_11, Methyltransferase domain
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	4	803483-803974	5,4,4	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Type I-B	GTTGAACTATAACATAGGATGTATTTAAAT,GTTGAACTATAACATAGGATGTATTTAAAT,GTTGAACTATAACATAGGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	7,7,7	7	TypeI-B	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	NA|60aa|up_4|NZ_CP009933.1_797720_797900_+,NA	NA|273aa|up_9|NZ_CP009933.1_792640_793459_+	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|255aa|up_8|NZ_CP009933.1_793976_794741_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|195aa|up_7|NZ_CP009933.1_794834_795419_+	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|227aa|up_6|NZ_CP009933.1_795566_796247_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|221aa|up_5|NZ_CP009933.1_796251_796914_+	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]	NA|60aa|up_4|NZ_CP009933.1_797720_797900_+	NA	NA|274aa|up_3|NZ_CP009933.1_798289_799111_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|225aa|up_2|NZ_CP009933.1_799251_799926_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|464aa|up_1|NZ_CP009933.1_800843_802235_-	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|51aa|up_0|NZ_CP009933.1_803120_803273_+	pfam14261, DUF4351, Domain of unknown function (DUF4351)	cas6|236aa|down_0|NZ_CP009933.1_804639_805347_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|589aa|down_1|NZ_CP009933.1_805363_807130_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|311aa|down_2|NZ_CP009933.1_807122_808055_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|243aa|down_3|NZ_CP009933.1_808058_808787_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|866aa|down_4|NZ_CP009933.1_808800_811398_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|165aa|down_5|NZ_CP009933.1_811446_811941_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|334aa|down_6|NZ_CP009933.1_812207_813209_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|96aa|down_7|NZ_CP009933.1_813210_813498_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|626aa|down_8|NZ_CP009933.1_817211_819089_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|666aa|down_9|NZ_CP009933.1_819606_821604_+	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	5	813678-814564	6,5,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Type I-B	GTTGAACTATAACATAGGATGTATTTAAAT,GTTGAACTATAACATAGGATGTATTTAAAT,GTTGAACTATAACATAGGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	13,13,13	13	TypeI-B	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	NA,NA	NA|464aa|up_9|NZ_CP009933.1_800843_802235_-	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|51aa|up_8|NZ_CP009933.1_803120_803273_+	pfam14261, DUF4351, Domain of unknown function (DUF4351)	cas6|236aa|up_7|NZ_CP009933.1_804639_805347_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|589aa|up_6|NZ_CP009933.1_805363_807130_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|311aa|up_5|NZ_CP009933.1_807122_808055_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|243aa|up_4|NZ_CP009933.1_808058_808787_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|866aa|up_3|NZ_CP009933.1_808800_811398_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|165aa|up_2|NZ_CP009933.1_811446_811941_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|334aa|up_1|NZ_CP009933.1_812207_813209_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|96aa|up_0|NZ_CP009933.1_813210_813498_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|626aa|down_0|NZ_CP009933.1_817211_819089_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|666aa|down_1|NZ_CP009933.1_819606_821604_+	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|265aa|down_2|NZ_CP009933.1_821821_822616_-	cd02223, cupin_Bh2720-like, Bacillus halodurans Bh2720 and related proteins, cupin domain	NA|84aa|down_3|NZ_CP009933.1_822962_823214_+	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|574aa|down_4|NZ_CP009933.1_823213_824935_+	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3	NA|391aa|down_5|NZ_CP009933.1_824934_826107_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|308aa|down_6|NZ_CP009933.1_826164_827088_-	cd07564, nitrilases_CHs, Nitrilases, cyanide hydratase (CH)s, and similar proteins (class 1 nitrilases)	NA|459aa|down_7|NZ_CP009933.1_827208_828585_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|375aa|down_8|NZ_CP009933.1_828734_829859_+	COG2108, COG2108, Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]	NA|227aa|down_9|NZ_CP009933.1_829918_830599_-	COG2364, COG2364, Predicted membrane protein [Function unknown]
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	6	1794038-1794120	6	CRISPRCasFinder	no		PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Orphan	AAGCAAACTGTTCTTGTGGAGCTGGA	26	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	NA|69aa|up_0|NZ_CP009933.1_1793260_1793467_+,NA|380aa|down_8|NZ_CP009933.1_1801055_1802195_+	NA|304aa|up_9|NZ_CP009933.1_1783488_1784400_+	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold	NA|171aa|up_8|NZ_CP009933.1_1784697_1785210_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|272aa|up_7|NZ_CP009933.1_1785219_1786035_-	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|375aa|up_6|NZ_CP009933.1_1786041_1787166_-	cd13631, PBP2_Ct-PDT_like, Catalytic domain of prephenate dehydratase from Chlorobium tepidum and similar proteins, subgroup 2; the type 2 periplasmic binding protein fold	NA|358aa|up_5|NZ_CP009933.1_1787180_1788254_-	pfam01264, Chorismate_synt, Chorismate synthase	NA|427aa|up_4|NZ_CP009933.1_1788231_1789512_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|354aa|up_3|NZ_CP009933.1_1789531_1790593_-	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis	NA|286aa|up_2|NZ_CP009933.1_1790596_1791454_-	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]	NA|338aa|up_1|NZ_CP009933.1_1791472_1792486_-	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed	NA|69aa|up_0|NZ_CP009933.1_1793260_1793467_+	NA	NA|147aa|down_0|NZ_CP009933.1_1794392_1794833_-	cd00518, H2MP, Hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP)	NA|221aa|down_1|NZ_CP009933.1_1794829_1795492_-	cd05390, HypB, nickel incorporation protein HypB	NA|116aa|down_2|NZ_CP009933.1_1795495_1795843_-	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|467aa|down_3|NZ_CP009933.1_1795950_1797351_-	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit	NA|278aa|down_4|NZ_CP009933.1_1797368_1798202_-	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion]	NA|141aa|down_5|NZ_CP009933.1_1798245_1798668_-	COG4892, COG4892, Predicted heme/steroid binding protein [General function prediction only]	NA|316aa|down_6|NZ_CP009933.1_1798962_1799910_-	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|276aa|down_7|NZ_CP009933.1_1800005_1800833_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|380aa|down_8|NZ_CP009933.1_1801055_1802195_+	NA	NA|87aa|down_9|NZ_CP009933.1_1802253_1802514_+	pfam06961, DUF1294, Protein of unknown function (DUF1294)
GCF_000968375.1_ASM96837v1	NZ_CP009933	Clostridium scatologenes strain ATCC 25775 chromosome, complete genome	7	5455041-5455161	7	CRISPRCasFinder	no		PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	Orphan	TAAATAGGAGGTTAAAGGTCTAAATGACCTTTAACG	36	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,DEDDh,cmr1gr7,cmr4gr7,cmr6gr7,cas10,cmr3gr5,csx1,cmr5gr11,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,WYL,DinG,RT,c2c9_V-U4,TnsE_C	NA,NA	NA|294aa|up_9|NZ_CP009933.1_5443914_5444796_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|450aa|up_8|NZ_CP009933.1_5444954_5446304_+	COG5276, COG5276, Uncharacterized conserved protein [Function unknown]	NA|287aa|up_7|NZ_CP009933.1_5446504_5447365_+	pfam18232, Chalcone_N, Chalcone isomerase N-terminal domain	NA|312aa|up_6|NZ_CP009933.1_5447418_5448354_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|168aa|up_5|NZ_CP009933.1_5448478_5448982_+	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|623aa|up_4|NZ_CP009933.1_5449069_5450938_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|302aa|up_3|NZ_CP009933.1_5451153_5452059_+	PRK05805, PRK05805, phosphate butyryltransferase; Validated	NA|231aa|up_2|NZ_CP009933.1_5452119_5452812_+	cd00984, DnaB_C, DnaB helicase C terminal domain	NA|68aa|up_1|NZ_CP009933.1_5452913_5453117_+	PRK09626, oorD, 2-oxoglutarate-acceptor oxidoreductase subunit OorD; Reviewed	NA|360aa|up_0|NZ_CP009933.1_5453216_5454296_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated	NA|182aa|down_0|NZ_CP009933.1_5455231_5455777_+	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase	NA|356aa|down_1|NZ_CP009933.1_5456397_5457465_+	PRK03011, PRK03011, butyrate kinase; Provisional	NA|898aa|down_2|NZ_CP009933.1_5457501_5460195_+	cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related enzymes	NA|87aa|down_3|NZ_CP009933.1_5460230_5460491_+	pfam18671, 4HPAD_g_N, 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal	NA|313aa|down_4|NZ_CP009933.1_5460500_5461439_+	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|272aa|down_5|NZ_CP009933.1_5461770_5462586_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|219aa|down_6|NZ_CP009933.1_5463153_5463810_+	COG0490, COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism]	NA|323aa|down_7|NZ_CP009933.1_5464132_5465101_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|214aa|down_8|NZ_CP009933.1_5465093_5465735_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_9|NZ_CP009933.1_5465787_5466609_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]
