bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164299|33|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801212	801180	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801180-801212	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164299|33|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801271	801239	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801239-801271	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164299|33|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	1415653	1415621	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1415621-1415653	ATTGGGAATACAATTTCTCTTTGTTGGGGTCCA	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795646|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	100.00	31	0	0	1	31	287501	287471	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	9e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287471-287501	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795646|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	287446	287416	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287416-287446	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795646|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	1631585	1631615	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1631585-1631615	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597129|33|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801180	801212	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801180-801212	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597129|33|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801239	801271	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801239-801271	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808424	808454	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808424-808454	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808480	808510	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808480-808510	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808536	808566	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808536-808566	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	65765	65795	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	65765-65795	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	363284	363254	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	363254-363284	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	629361	629331	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	629331-629361	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	808591	808621	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808591-808621	CACATTATCGTAAGCTGACTTTCCGTCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	852948	852978	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	852948-852978	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1121303	1121273	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1121273-1121303	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1327345	1327315	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1327315-1327345	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1415665	1415695	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1415665-1415695	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1611797	1611767	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1611767-1611797	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1929121	1929151	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1929121-1929151	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2265639	2265669	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2265639-2265669	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020536	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276440|31|NC_020536|CRISPRCasFinder	NC_020536.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2440956	2440986	164273-164357|403517-403618|754675-754757|795622-795700|852613-852694|1327324-1327413|1597103-1597187|2156051-2156131|2168372-2168457|2276415-2276495	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2440956-2440986	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
