bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164300|33|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801185	801153	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801153-801185	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164300|33|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801244	801212	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801212-801244	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164300|33|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	1415618	1415586	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1415586-1415618	ATTGGGAATACAATTTCTCTTTGTTGGGGTCCA	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795619|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	100.00	31	0	0	1	31	287502	287472	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	9e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287472-287502	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795619|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	287447	287417	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287417-287447	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795619|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	1631903	1631933	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1631903-1631933	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597447|33|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801153	801185	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801153-801185	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597447|33|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801212	801244	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801212-801244	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808397	808427	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808397-808427	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808453	808483	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808453-808483	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808509	808539	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808509-808539	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	65763	65793	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	65763-65793	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	363287	363257	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	363257-363287	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	629334	629304	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	629304-629334	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	808564	808594	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808564-808594	CACATTATCGTAAGCTGACTTTCCGTCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	852921	852951	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	852921-852951	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1121268	1121238	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1121238-1121268	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1327310	1327280	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1327280-1327310	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1415630	1415660	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1415630-1415660	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1612115	1612085	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1612085-1612115	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1929435	1929465	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1929435-1929465	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2265949	2265979	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2265949-2265979	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020532	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276750|31|NC_020532|CRISPRCasFinder	NC_020532.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2441327	2441357	164274-164358|403520-403621|754648-754730|795595-795673|852586-852667|1327289-1327378|1597421-1597505|2156361-2156441|2168682-2168767|2276725-2276805	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2441327-2441357	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
