assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000967155.2_HUSEC2011CHR1	NZ_HF572917	Escherichia coli strain HUSEC2011	1	585335-585431	1	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|454aa|up_9|NZ_HF572917.1_573214_574576_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_HF572917.1_574632_575934_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_HF572917.1_575955_577101_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_HF572917.1_577229_578015_-	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|412aa|up_5|NZ_HF572917.1_578025_579261_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_HF572917.1_579282_580332_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_HF572917.1_580648_582316_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_HF572917.1_582325_583585_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_HF572917.1_583595_584411_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_HF572917.1_584407_585301_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_HF572917.1_585495_586563_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_HF572917.1_586559_587069_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_HF572917.1_587186_587909_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_HF572917.1_587911_588406_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_HF572917.1_588579_589965_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_HF572917.1_590000_590522_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_HF572917.1_590629_590842_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_HF572917.1_590843_591710_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_HF572917.1_592190_592733_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_HF572917.1_592952_593645_+	PRK15195, PRK15195, molecular chaperone FimC
GCF_000967155.2_HUSEC2011CHR1	NZ_HF572917	Escherichia coli strain HUSEC2011	2	1912775-1912905	2	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|60aa|up_7|NZ_HF572917.1_1908034_1908214_-,NA|35aa|up_5|NZ_HF572917.1_1908824_1908929_-,NA|361aa|up_0|NZ_HF572917.1_1911639_1912722_-,NA|181aa|down_3|NZ_HF572917.1_1914471_1915014_+,NA|128aa|down_5|NZ_HF572917.1_1916272_1916656_+,NA|238aa|down_6|NZ_HF572917.1_1916659_1917373_+,NA|120aa|down_7|NZ_HF572917.1_1917404_1917764_+,NA|70aa|down_8|NZ_HF572917.1_1917732_1917942_-	NA|106aa|up_9|NZ_HF572917.1_1907162_1907480_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|162aa|up_8|NZ_HF572917.1_1907530_1908016_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|60aa|up_7|NZ_HF572917.1_1908034_1908214_-	NA	NA|71aa|up_6|NZ_HF572917.1_1908423_1908636_-	pfam01848, HOK_GEF, Hok/gef family	NA|35aa|up_5|NZ_HF572917.1_1908824_1908929_-	NA	NA|195aa|up_4|NZ_HF572917.1_1909044_1909629_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|132aa|up_3|NZ_HF572917.1_1909685_1910081_-	pfam06163, DUF977, Bacterial protein of unknown function (DUF977)	NA|257aa|up_2|NZ_HF572917.1_1910096_1910867_-	pfam07789, DUF1627, Protein of unknown function (DUF1627)	NA|247aa|up_1|NZ_HF572917.1_1910892_1911633_-	PRK12377, PRK12377, putative replication protein; Provisional	NA|361aa|up_0|NZ_HF572917.1_1911639_1912722_-	NA	NA|99aa|down_0|NZ_HF572917.1_1912975_1913272_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|67aa|down_1|NZ_HF572917.1_1913410_1913611_-	pfam09048, Cro, Cro	NA|238aa|down_2|NZ_HF572917.1_1913711_1914425_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|181aa|down_3|NZ_HF572917.1_1914471_1915014_+	NA	NA|259aa|down_4|NZ_HF572917.1_1915001_1915778_+	pfam08861, DUF1828, Domain of unknown function DUF1828	NA|128aa|down_5|NZ_HF572917.1_1916272_1916656_+	NA	NA|238aa|down_6|NZ_HF572917.1_1916659_1917373_+	NA	NA|120aa|down_7|NZ_HF572917.1_1917404_1917764_+	NA	NA|70aa|down_8|NZ_HF572917.1_1917732_1917942_-	NA	NA|74aa|down_9|NZ_HF572917.1_1918398_1918620_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed
GCF_000967155.2_HUSEC2011CHR1	NZ_HF572917	Escherichia coli strain HUSEC2011	3	3262888-3262977	3	CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC	29	0	0	NA	NA	I-E	1	1	TypeI-E	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|254aa|up_9|NZ_HF572917.1_3254700_3255462_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_HF572917.1_3255442_3256492_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_HF572917.1_3256488_3256968_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_HF572917.1_3256967_3257678_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_HF572917.1_3257696_3258008_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_HF572917.1_3258201_3258525_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_HF572917.1_3258574_3259180_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_HF572917.1_3259179_3260607_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_HF572917.1_3260608_3261517_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_HF572917.1_3261768_3262806_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_HF572917.1_3263073_3263367_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_HF572917.1_3263366_3264287_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_HF572917.1_3264283_3264934_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_HF572917.1_3264915_3265662_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_HF572917.1_3265672_3266728_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_HF572917.1_3266739_3267276_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_HF572917.1_3267272_3268835_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_HF572917.1_3268932_3271632_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|371aa|down_8|NZ_HF572917.1_3271985_3273098_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|51aa|down_9|NZ_HF572917.1_3273174_3273327_-	pfam01848, HOK_GEF, Hok/gef family
GCF_000967155.2_HUSEC2011CHR1	NZ_HF572917	Escherichia coli strain HUSEC2011	4	3290026-3290847	4,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,GGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,28	0	0	NA	NA	I-E:I-E:I-E	13,13,13	13	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA|47aa|down_1|NZ_HF572917.1_3291996_3292137_+	NA|424aa|up_9|NZ_HF572917.1_3278669_3279941_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_HF572917.1_3279931_3280192_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_HF572917.1_3280208_3280784_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_HF572917.1_3280931_3281792_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_HF572917.1_3281788_3282568_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_HF572917.1_3282545_3283955_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_HF572917.1_3283976_3285431_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_HF572917.1_3285500_3286286_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_HF572917.1_3286604_3287882_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_HF572917.1_3287908_3289387_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_HF572917.1_3291186_3291858_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_HF572917.1_3291996_3292137_+	NA	NA|433aa|down_2|NZ_HF572917.1_3293082_3294381_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_HF572917.1_3294468_3296106_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_HF572917.1_3296333_3297125_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_HF572917.1_3297195_3297531_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_HF572917.1_3297530_3297779_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_HF572917.1_3297856_3300091_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_HF572917.1_3300138_3301440_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_HF572917.1_3301496_3304253_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
