The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	1389776	1429834	5107633	protease,plate	Cronobacter_phage(20.0%)	30	NA	NA
WP_045781828.1|1389776_1391117_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_045781829.1|1391113_1391803_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_045781830.1|1391799_1393503_+	OmpA family protein	NA	NA	NA	NA	NA
WP_045781831.1|1393507_1393999_+	type VI secretion system effector Hcp	NA	NA	NA	NA	NA
WP_045781832.1|1394172_1396827_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.4	9.4e-96
WP_045781833.1|1396823_1399316_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	2.3e-19
WP_045781834.1|1399570_1401493_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	30.5	1.7e-59
WP_045781835.1|1401493_1401757_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_045781836.1|1402511_1403252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045781837.1|1405501_1405765_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_045781838.1|1405764_1407195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045781839.1|1407200_1410620_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_045781840.1|1410619_1412221_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_045781841.1|1412269_1414024_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_045781842.1|1413987_1415073_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_045781843.1|1415050_1415596_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_045781844.1|1415595_1416051_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_045781845.1|1416466_1417891_+	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_148674361.1|1418489_1419422_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	80.5	2.8e-132
WP_045781847.1|1419632_1420238_+	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	W5SAS9	Pithovirus	28.3	2.0e-09
WP_045781848.1|1420234_1420894_+	heme exporter protein CcmB	NA	NA	NA	NA	NA
WP_045781849.1|1420923_1421664_+	heme ABC transporter permease	NA	NA	NA	NA	NA
WP_045781850.1|1421660_1421873_+	heme exporter protein CcmD	NA	NA	NA	NA	NA
WP_045781851.1|1421873_1422353_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_045781852.1|1422349_1424305_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_045781853.1|1424301_1424859_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_045784555.1|1424858_1425932_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_045781854.1|1425945_1426704_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
WP_045781855.1|1426871_1428824_+|protease	protease modulator HflK	protease	NA	NA	NA	NA
WP_045781856.1|1428820_1429834_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 2
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	1488275	1497659	5107633	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
WP_045781904.1|1488275_1489391_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	39.8	1.4e-08
WP_045781905.1|1489387_1491334_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	7.7e-39
WP_008461102.1|1491412_1491634_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
WP_008461103.1|1491957_1492278_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	47.2	2.4e-14
WP_045781906.1|1492305_1494579_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.4	5.6e-166
WP_002211347.1|1494676_1494895_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_045781907.1|1495180_1495876_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_045781908.1|1495937_1497659_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	F2Y2R6	Organic_Lake_phycodnavirus	23.6	9.6e-17
>prophage 3
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	1885935	1897079	5107633	tRNA	Pseudomonas_phage(28.57%)	10	NA	NA
WP_008456585.1|1885935_1887864_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.4	6.7e-128
WP_071530481.1|1887867_1888410_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	34.1	1.1e-16
WP_006118955.1|1888501_1888699_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_000124850.1|1888743_1889100_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_187107652.1|1889320_1889389_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_045782215.1|1889523_1890507_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	42.1	1.4e-33
WP_045782216.1|1890521_1892909_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	25.0	1.8e-05
WP_001229265.1|1892913_1893213_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
WP_045782217.1|1894077_1895583_-	hypothetical protein	NA	A0A125RNN9	Pseudomonas_phage	38.3	2.8e-60
WP_045782218.1|1895591_1897079_-	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	53.4	2.3e-144
>prophage 4
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	3162378	3170689	5107633		Enterobacteria_phage(42.86%)	8	NA	NA
WP_045783144.1|3162378_3163596_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.3e-12
WP_045783145.1|3163585_3164386_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_045783146.1|3164398_3164947_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	2.6e-53
WP_045783147.1|3164950_3165823_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.5	4.2e-37
WP_045783148.1|3165832_3166702_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.3	7.8e-108
WP_045783149.1|3166715_3167804_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.6	8.3e-99
WP_045783150.1|3168190_3169090_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	41.4	1.0e-49
WP_045783151.1|3169264_3170689_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	33.7	1.1e-18
>prophage 5
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	3781956	3802134	5107633	lysis,plate	uncultured_Caudovirales_phage(33.33%)	23	NA	NA
WP_045784708.1|3781956_3782517_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	83.6	1.3e-84
WP_045783573.1|3784722_3785403_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	75.7	1.5e-98
WP_045783574.1|3785399_3786599_-|plate	baseplate J/gp47 family protein	plate	A0A0M4RD32	Salmonella_phage	71.2	9.9e-154
WP_045783575.1|3786599_3786950_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	56.4	7.6e-30
WP_045783576.1|3788694_3789003_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	53.0	7.1e-24
WP_045783577.1|3789012_3789591_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	44.9	2.4e-33
WP_045783578.1|3789590_3791342_-	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	34.5	5.3e-63
WP_045783579.1|3791519_3791933_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	59.7	2.4e-38
WP_045783580.1|3791936_3792377_-	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	64.4	2.5e-46
WP_045783581.1|3792387_3793527_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	61.3	2.6e-127
WP_045783582.1|3793530_3794070_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	43.0	4.0e-38
WP_045783583.1|3794271_3795150_-	triacylglycerol lipase	NA	NA	NA	NA	NA
WP_045783584.1|3795357_3795816_-|lysis	lysis protein	lysis	Q2A0C4	Sodalis_phage	44.6	1.9e-20
WP_045783585.1|3795812_3796304_-	lysozyme	NA	A0A2H4JCH1	uncultured_Caudovirales_phage	52.8	5.1e-40
WP_045783586.1|3796303_3796603_-	hypothetical protein	NA	O64361	Escherichia_phage	45.9	7.4e-18
WP_045783587.1|3796655_3796991_-	antitermination protein	NA	Q716D8	Shigella_phage	49.1	7.1e-17
WP_045783588.1|3797355_3798102_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PIE7	Escherichia_phage	46.3	1.1e-46
WP_045783589.1|3798364_3798625_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	50.0	4.2e-17
WP_008459499.1|3798621_3799002_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_045783590.1|3799001_3799733_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_045783591.1|3799807_3800545_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_008459503.1|3800548_3801457_-	GTPase Era	NA	NA	NA	NA	NA
WP_008459505.1|3801453_3802134_-	ribonuclease III	NA	A0A0P0YM82	Yellowstone_lake_phycodnavirus	29.7	4.3e-21
>prophage 6
NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	5107633	4107785	4116979	5107633		uncultured_Mediterranean_phage(28.57%)	8	NA	NA
WP_016239675.1|4107785_4108352_+	helix-turn-helix domain-containing protein	NA	M1PL54	Cellulophaga_phage	44.9	7.2e-38
WP_004114867.1|4108441_4109017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001530776.1|4109028_4110483_-	hypothetical protein	NA	A0A0R6PHE0	Moraxella_phage	28.3	5.8e-23
WP_148674384.1|4110642_4113210_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	21.2	1.1e-29
WP_008458325.1|4113278_4114271_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_045783779.1|4114327_4115467_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	6.6e-06
WP_045783780.1|4115597_4116224_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	48.8	2.4e-34
WP_039287134.1|4116217_4116979_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	45.1	2.4e-52
