The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	341433	376260	4817335	portal,tail,integrase,head,protease,terminase,capsid	Sinorhizobium_phage(29.03%)	46	343783:343798	381970:381985
WP_052700009.1|341433_343602_-	hypothetical protein	NA	A0A076G8H4	Sinorhizobium_phage	49.3	3.6e-170
WP_045679239.1|343651_344047_-	hypothetical protein	NA	A0A076G6J4	Sinorhizobium_phage	48.9	1.1e-29
343783:343798	attL	CGGCGATATCGCCGTC	NA	NA	NA	NA
WP_045679240.1|344054_344657_-	hypothetical protein	NA	A0A076G707	Sinorhizobium_phage	53.0	1.7e-61
WP_045679241.1|344656_345391_-	hypothetical protein	NA	A0A076GD29	Sinorhizobium_phage	51.8	4.4e-64
WP_045679242.1|345394_347785_-	hypothetical protein	NA	A0A1B0T6I6	Pelagibaca_phage	31.6	6.8e-21
WP_052699655.1|347777_348320_-	gene transfer agent family protein	NA	A0A2D2W210	Sinorhizobium_phage	34.2	1.7e-07
WP_045679243.1|348319_348763_-	hypothetical protein	NA	B4UTQ3	Rhizobium_phage	26.8	3.3e-06
WP_144409431.1|348986_349346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052699657.1|349342_349786_-	HK97 gp10 family phage protein	NA	A0A141GEW6	Brucella_phage	39.0	3.9e-15
WP_045679244.1|349778_350189_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_158498592.1|350185_350533_-|head,tail	head-tail adaptor protein	head,tail	B4UTP9	Rhizobium_phage	34.0	1.8e-07
WP_045679245.1|350514_351090_-	class I SAM-dependent methyltransferase	NA	A0A0E3HYS4	Synechococcus_phage	29.8	4.6e-16
WP_045679246.1|351083_351674_-	hypothetical protein	NA	Q71TJ0	Escherichia_phage	35.9	1.6e-27
WP_045679247.1|351670_352240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679248.1|352233_352695_-	hypothetical protein	NA	M4QNT5	Tetraselmis_viridis_virus	48.7	2.7e-27
WP_045679249.1|353084_354407_-|capsid	phage major capsid protein	capsid	A0A218MGA4	Pseudomonas_phage	47.0	1.8e-84
WP_045679250.1|354403_355267_-|protease	Clp protease ClpP	protease	A0A0U4B0J0	Pseudomonas_phage	54.8	9.8e-71
WP_045679251.1|355253_356591_-|portal	phage portal protein	portal	H2BDA8	Pseudomonas_virus	43.3	5.1e-82
WP_144409647.1|356590_358231_-|terminase	terminase large subunit	terminase	I3ULZ6	Rhodobacter_phage	57.8	1.5e-168
WP_082074572.1|358292_358775_-	hypothetical protein	NA	I3ULZ5	Rhodobacter_phage	46.1	3.0e-29
WP_045679253.1|358852_359221_-	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	61.7	8.0e-30
WP_045679254.1|359364_360159_-	hypothetical protein	NA	R9TRT9	Rhizobium_phage	45.8	8.2e-56
WP_045679255.1|360588_362601_-	hypothetical protein	NA	R9TSC7	Rhizobium_phage	56.4	5.8e-207
WP_045679256.1|362593_363835_-	hypothetical protein	NA	R9TNC4	Rhizobium_phage	47.9	3.2e-99
WP_045679257.1|366209_366524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158498593.1|366513_366675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679258.1|366665_367070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679259.1|367062_367347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052699659.1|367343_367730_-	HNH endonuclease	NA	K4IB44	Streptomyces_phage	40.4	3.3e-10
WP_045679260.1|367726_368383_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_045679261.1|368379_368649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679262.1|368651_369107_-	hypothetical protein	NA	A0A291AUS4	Sinorhizobium_phage	35.1	3.9e-10
WP_158498594.1|369345_369513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679263.1|369509_369725_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_052699660.1|369818_370157_+	helix-turn-helix transcriptional regulator	NA	Q8W6G7	Sinorhizobium_phage	62.7	2.4e-17
WP_144409435.1|370197_370431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045679265.1|370677_370974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_179945012.1|371039_371663_+	hypothetical protein	NA	A0A076G6F8	Sinorhizobium_phage	50.8	4.8e-11
WP_144409437.1|371659_371911_+	hypothetical protein	NA	A0A2H4PHJ9	Dickeya_phage	38.8	2.2e-07
WP_045679266.1|372067_372283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045679267.1|372282_372933_+	hypothetical protein	NA	R9TQJ1	Rhizobium_phage	49.8	5.7e-47
WP_045679268.1|372944_373412_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	68.7	4.1e-55
WP_045679269.1|373423_373687_+	DUF2312 domain-containing protein	NA	Q8W6H2	Sinorhizobium_phage	71.1	4.5e-27
WP_144409439.1|373683_373986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052699661.1|373972_375091_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	33.6	1.5e-39
WP_045679271.1|375252_376260_+|integrase	site-specific integrase	integrase	D6PIF1	uncultured_phage	28.7	1.9e-12
381970:381985	attR	CGGCGATATCGCCGTC	NA	NA	NA	NA
>prophage 2
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	2933226	3012484	4817335	tail,plate,head,terminase,tRNA,transposase	Ochrobactrum_phage(20.69%)	90	NA	NA
WP_045685225.1|2933226_2934093_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	54.7	4.7e-73
WP_045681919.1|2934154_2935081_-	glutaminase	NA	NA	NA	NA	NA
WP_045681921.1|2935210_2935828_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_045681923.1|2936120_2936948_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_045681925.1|2936937_2937585_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_045681927.1|2937658_2938378_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_045681929.1|2938480_2939179_+	DUF899 family protein	NA	NA	NA	NA	NA
WP_045681931.1|2939322_2940537_+	pyrophosphate--fructose-6-phosphate 1-phosphotransferase	NA	NA	NA	NA	NA
WP_045681933.1|2940588_2941224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045681935.1|2941326_2942553_+	DUF3419 family protein	NA	NA	NA	NA	NA
WP_045681937.1|2942539_2943187_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_144409690.1|2943243_2944425_-	Bcr/CflA family efflux MFS transporter	NA	NA	NA	NA	NA
WP_045681941.1|2944623_2944959_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_045681944.1|2945068_2945302_-	BolA family transcriptional regulator	NA	NA	NA	NA	NA
WP_045681945.1|2945304_2947557_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.8	6.6e-159
WP_045681947.1|2947673_2949128_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_045681949.1|2949232_2950483_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_045681952.1|2950580_2950907_+	transcriptional activator HlyU	NA	NA	NA	NA	NA
WP_045681954.1|2951045_2951273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045681956.1|2952499_2952865_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_045681958.1|2952855_2953434_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
WP_045681960.1|2953448_2954048_+	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_045681962.1|2954086_2955277_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_045681963.1|2955393_2956359_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
WP_045681966.1|2956368_2957667_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA	NA
WP_045681967.1|2957751_2959833_+	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
WP_045681968.1|2959843_2960887_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA	NA
WP_045681969.1|2960927_2961419_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA	NA
WP_045681971.1|2961558_2962173_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
WP_045681979.1|2962221_2962530_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
WP_045681980.1|2962537_2964547_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
WP_045681981.1|2964546_2966058_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_045685226.1|2966075_2967515_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
WP_045681982.1|2967516_2968269_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_045681983.1|2968285_2969959_+	ribonuclease J	NA	NA	NA	NA	NA
WP_045681985.1|2969962_2970619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082074737.1|2970765_2971029_+	DUF1467 family protein	NA	NA	NA	NA	NA
WP_045681989.1|2971520_2972840_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_045681991.1|2972924_2974223_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_045681994.1|2974234_2974942_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	33.0	5.0e-12
WP_045681996.1|2975615_2975885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144409560.1|2976423_2977428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045681997.1|2977396_2977750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045681998.1|2977751_2978525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682000.1|2978571_2979387_-	DNA adenine methylase	NA	R9U1F2	Rhizobium_phage	73.9	9.2e-111
WP_045682002.1|2979533_2980181_-	DUF4376 domain-containing protein	NA	A0A067ZI91	Vibrio_phage	33.1	7.0e-13
WP_052699841.1|2980195_2980906_-|tail	phage tail protein	tail	A0A077K818	Ralstonia_phage	50.0	5.9e-29
WP_045682004.1|2980906_2981500_-	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_045682006.1|2981496_2982651_-|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	30.7	5.4e-24
WP_045685228.1|2982647_2983112_-	phage GP46 family protein	NA	NA	NA	NA	NA
WP_082074738.1|2983167_2983689_-|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_082074912.1|2983744_2984923_-	hypothetical protein	NA	M4M9L5	Vibrio_phage	29.0	2.7e-26
WP_045682008.1|2984984_2986217_-	DNA circularization N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_144409561.1|2986216_2988532_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	27.6	2.8e-27
WP_045682011.1|2988655_2989129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682012.1|2989125_2989488_-|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_045682013.1|2989500_2990985_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	M1Q565	Vibrio_phage	28.3	9.0e-48
WP_045682015.1|2990988_2991225_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_052699842.1|2991227_2991800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682016.1|2991801_2992239_-	DUF1320 domain-containing protein	NA	NA	NA	NA	NA
WP_045682018.1|2992312_2992720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682020.1|2992812_2993706_-|head	Mu-like prophage major head subunit gpT family protein	head	A0A1B0T6J4	Pelagibaca_phage	51.0	9.2e-80
WP_045682029.1|2993740_2994133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682031.1|2994133_2995156_-	hypothetical protein	NA	M4SNT6	Rhodobacter_phage	36.1	6.7e-42
WP_045682033.1|2995228_2995735_-	phage virion morphogenesis protein	NA	A0A2K9VH22	Faecalibacterium_phage	35.9	3.0e-11
WP_144409562.1|2995849_2997007_-	hypothetical protein	NA	J9STS2	Pseudomonas_phage	42.9	4.6e-47
WP_045682038.1|2997041_2998649_-	DUF935 domain-containing protein	NA	M4SPR8	Rhodobacter_phage	41.9	4.6e-106
WP_082074739.1|2998651_3000007_-|terminase	terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	60.9	1.2e-152
WP_045682040.1|3000003_3000597_-	DUF3486 family protein	NA	A0A219VH75	Ochrobactrum_phage	56.4	2.4e-52
WP_045682041.1|3000599_3000896_-	hypothetical protein	NA	M4SPS4	Rhodobacter_phage	45.3	9.9e-15
WP_052699843.1|3000892_3001231_-	DUF2730 family protein	NA	NA	NA	NA	NA
WP_045682043.1|3001220_3001424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682045.1|3001449_3001812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144409563.1|3001811_3002075_-	NAD(P)+ transhydrogenase beta chain	NA	A0A219VHD7	Ochrobactrum_phage	39.4	9.8e-06
WP_045682049.1|3002071_3002773_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B1INV7	uncultured_Mediterranean_phage	50.7	6.6e-33
WP_045682051.1|3002847_3003219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682057.1|3003208_3003424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045685234.1|3003420_3003669_-	hypothetical protein	NA	A0A1B0T6G9	Thiobacimonas_phage	47.4	9.2e-06
WP_045682059.1|3003686_3004310_-	regulatory protein GemA	NA	M4STB3	Rhodobacter_phage	45.9	3.9e-37
WP_045682061.1|3004372_3005110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045685236.1|3005175_3005844_-	DUF3164 family protein	NA	A0A1B0T6L8	Pelagibaca_phage	62.2	9.0e-72
WP_045682063.1|3005942_3006182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682065.1|3006178_3006481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682066.1|3006480_3007509_-	AAA family ATPase	NA	A0A219VHC7	Ochrobactrum_phage	55.8	4.4e-102
WP_045682068.1|3007606_3009565_-|transposase	Mu transposase C-terminal domain-containing protein	transposase	A0A219VHD4	Ochrobactrum_phage	64.0	3.1e-173
WP_045682070.1|3009561_3010020_-	hypothetical protein	NA	A0A219VHC5	Ochrobactrum_phage	66.4	7.3e-49
WP_045682072.1|3010016_3010826_-	ParB N-terminal domain-containing protein	NA	A0A219VHB6	Ochrobactrum_phage	57.4	4.3e-68
WP_052699844.1|3010825_3011179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045682074.1|3011372_3011660_-	helix-turn-helix domain-containing protein	NA	R9U1A5	Rhizobium_phage	46.4	1.9e-07
WP_052699845.1|3011803_3012484_+	LexA family transcriptional regulator	NA	G8GWB1	Rhodobacter_phage	45.6	2.0e-55
>prophage 3
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	3569830	3579894	4817335		uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_045682857.1|3569830_3570340_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	57.5	9.3e-45
WP_045682859.1|3570408_3570981_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	57.5	8.9e-44
WP_045682861.1|3571012_3571507_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.6	3.2e-26
WP_045682862.1|3571583_3572288_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_045682864.1|3572371_3575182_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.2	2.7e-101
WP_045682866.1|3575430_3576060_+	MarC family protein	NA	NA	NA	NA	NA
WP_045682868.1|3576164_3576695_-	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	75.8	7.9e-47
WP_045682870.1|3576972_3579894_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.2	0.0e+00
>prophage 4
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	3715789	3798009	4817335	portal,tail,integrase,head,terminase,capsid,tRNA,transposase	Sinorhizobium_phage(40.0%)	85	3751969:3752001	3799310:3799342
WP_045683040.1|3715789_3718447_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	36.0	4.5e-74
WP_045683042.1|3718559_3719579_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_158498654.1|3719939_3720116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683044.1|3720361_3721240_+	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	37.8	1.0e-43
WP_045683046.1|3721317_3721887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158498655.1|3721892_3723578_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	29.2	3.5e-11
WP_045685396.1|3723838_3724102_+	DUF4031 domain-containing protein	NA	A0A291LA06	Bordetella_phage	60.6	1.7e-18
WP_045683047.1|3724123_3724564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045685397.1|3724671_3725994_-	dNTP triphosphohydrolase	NA	NA	NA	NA	NA
WP_045683049.1|3726033_3726669_-	DnaJ domain-containing protein	NA	Q8QNB4	Ectocarpus_siliculosus_virus	53.2	2.9e-11
WP_045683051.1|3727096_3728323_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.4	1.8e-30
WP_045683053.1|3728343_3729255_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_045683056.1|3729356_3730364_+	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA	NA
WP_052699904.1|3730509_3731511_+	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA	NA
WP_045683058.1|3731597_3733013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082074789.1|3733336_3733828_+	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_045683061.1|3733885_3734863_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
WP_045683063.1|3734859_3735897_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_045683065.1|3736077_3737361_-	beta-ketoacyl-ACP synthase	NA	NA	NA	NA	NA
WP_045683067.1|3737372_3738581_-	beta-ketoacyl-ACP synthase	NA	NA	NA	NA	NA
WP_045683071.1|3738582_3739071_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_144409593.1|3739124_3739412_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_045683072.1|3739508_3740864_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_045683073.1|3741062_3741791_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_052699905.1|3741979_3748690_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_052700043.1|3749743_3751168_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_045683081.1|3751559_3751865_+	ETC complex I subunit	NA	NA	NA	NA	NA
3751969:3752001	attL	GACGGTCGCAGGTTCGAATCCTGCAGGGGTCGC	NA	NA	NA	NA
WP_045683082.1|3752603_3752945_+	hypothetical protein	NA	A0A141GEY3	Brucella_phage	41.2	8.2e-13
WP_045683084.1|3753929_3754118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045683086.1|3755105_3755429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045685403.1|3755439_3755859_-	hypothetical protein	NA	A0A1X9HVL7	Ruegeria_phage	46.0	2.4e-30
WP_045683087.1|3755858_3756800_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_045683088.1|3756844_3757201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683090.1|3757193_3758345_-	hypothetical protein	NA	G8GWG3	Rhodobacter_phage	37.4	1.2e-20
WP_045683092.1|3758348_3758615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683093.1|3758619_3759264_-	DUF4376 domain-containing protein	NA	A0A2L0V114	Agrobacterium_phage	70.4	2.3e-40
WP_045683094.1|3759263_3760121_-	hypothetical protein	NA	W6EKG4	Rhizobium_phage	45.9	1.9e-10
WP_052699906.1|3760117_3763315_-	host specificity protein J	NA	W6E8G0	Rhizobium_phage	41.4	4.6e-166
WP_045683095.1|3763330_3763927_-|tail	tail assembly protein	tail	V9QL88	Rhizobium_phage	38.7	1.3e-24
WP_045683097.1|3764009_3764237_+	DUF4160 domain-containing protein	NA	NA	NA	NA	NA
WP_045683099.1|3764211_3764685_+	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
WP_082074790.1|3764814_3765171_+	HigA family addiction module antidote protein	NA	A0A191ZBZ4	Erwinia_phage	41.0	2.0e-06
WP_045683101.1|3765105_3765801_-	C40 family peptidase	NA	L7TLZ5	Rhizobium_phage	37.8	3.2e-40
WP_052699908.1|3765814_3766570_-|tail	phage minor tail protein L	tail	L7TNY8	Rhizobium_phage	43.7	4.0e-52
WP_052699909.1|3766566_3766935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683103.1|3766931_3767279_-|tail	phage tail protein	tail	A0A1B1IV54	uncultured_Mediterranean_phage	35.8	1.2e-11
WP_052699910.1|3767278_3769264_-	hypothetical protein	NA	A0A291AUM6	Sinorhizobium_phage	31.7	3.6e-60
WP_082074791.1|3769260_3769491_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_045683109.1|3769487_3769895_-	hypothetical protein	NA	A0A291AUM7	Sinorhizobium_phage	55.9	7.5e-29
WP_045683110.1|3769894_3770311_-	hypothetical protein	NA	A0A291AUM5	Sinorhizobium_phage	49.6	1.0e-28
WP_045683112.1|3770338_3770590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082074793.1|3770981_3771401_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
WP_045683117.1|3771534_3772431_+	DMT family transporter	NA	NA	NA	NA	NA
WP_045683118.1|3772556_3773021_-	hypothetical protein	NA	A0A291AUM4	Sinorhizobium_phage	50.3	3.5e-38
WP_045683121.1|3773020_3773356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683123.1|3773352_3773802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683125.1|3773862_3774894_-|capsid	major capsid protein	capsid	A0A291AUL7	Sinorhizobium_phage	75.4	7.2e-153
WP_045683126.1|3774934_3775291_-|head	head decoration protein	head	A0A291AUM0	Sinorhizobium_phage	63.2	4.1e-31
WP_045685408.1|3775295_3775841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082074924.1|3775866_3776724_-	S49 family peptidase	NA	A0A291AUM2	Sinorhizobium_phage	73.9	2.7e-113
WP_045683130.1|3776755_3778513_-|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	71.8	1.1e-246
WP_144409596.1|3778509_3778743_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_045683132.1|3778758_3780813_-|terminase	phage terminase large subunit family protein	terminase	A0A291AUK9	Sinorhizobium_phage	68.1	1.6e-289
WP_045683133.1|3780809_3781472_-	hypothetical protein	NA	A0A291AUL0	Sinorhizobium_phage	45.2	4.6e-36
WP_052699912.1|3781613_3782354_-	hypothetical protein	NA	A0A291AUL1	Sinorhizobium_phage	53.5	6.7e-60
WP_045683134.1|3782594_3783230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683135.1|3783226_3783958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683136.1|3783950_3784391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052699913.1|3784374_3785205_-	YdaU family protein	NA	A0A076GD06	Sinorhizobium_phage	44.6	8.4e-27
WP_045683138.1|3785201_3785942_-	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	71.2	2.4e-94
WP_144409599.1|3785938_3786220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144409600.1|3786216_3786786_-	hypothetical protein	NA	K4JV62	Caulobacter_virus	31.7	2.8e-05
WP_045683140.1|3786787_3787270_-	hypothetical protein	NA	A0A291AUS4	Sinorhizobium_phage	30.8	1.0e-08
WP_045683141.1|3787442_3787655_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_045685414.1|3787741_3788530_+	LexA family transcriptional regulator	NA	A0A291AUK0	Sinorhizobium_phage	65.9	2.6e-62
WP_144409601.1|3788916_3789676_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.6	2.5e-25
WP_144409602.1|3789690_3790359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052699917.1|3791057_3791483_+	hypothetical protein	NA	A0A291AUJ2	Sinorhizobium_phage	56.7	3.3e-19
WP_052699918.1|3791485_3791728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045684868.1|3792332_3793592_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	37.3	4.2e-46
WP_045680329.1|3793588_3794467_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	47.2	3.2e-53
WP_052699920.1|3794580_3795111_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A141GEZ3	Brucella_phage	38.0	6.8e-30
WP_045685420.1|3795360_3795594_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_082074795.1|3795586_3796921_+	DNA (cytosine-5-)-methyltransferase	NA	M4QPY5	Micromonas_pusilla_virus	46.9	6.0e-35
WP_144409603.1|3796932_3798009_+	hypothetical protein	NA	Q858T2	Yersinia_virus	29.2	1.2e-28
3799310:3799342	attR	GCGACCCCTGCAGGATTCGAACCTGCGACCGTC	NA	NA	NA	NA
>prophage 5
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	3902389	3915385	4817335	tRNA	uncultured_Mediterranean_phage(81.82%)	13	NA	NA
WP_045683287.1|3902389_3904945_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	47.2	1.3e-62
WP_045683289.1|3905114_3905465_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	33.7	7.9e-11
WP_144409609.1|3905674_3906544_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
WP_045683291.1|3906628_3908143_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2H4JB19	uncultured_Caudovirales_phage	30.3	3.9e-06
WP_082074925.1|3908249_3908903_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.8	8.9e-16
WP_045683293.1|3908914_3909676_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	40.4	6.7e-39
WP_045683295.1|3909679_3910963_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.5	6.7e-100
WP_045683296.1|3911071_3911890_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	42.1	1.8e-50
WP_052699928.1|3911889_3912441_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_045683298.1|3912479_3912683_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	53.6	7.3e-09
WP_045683300.1|3912719_3913796_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	29.5	6.6e-16
WP_082074801.1|3913844_3914558_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	42.6	4.8e-39
WP_045683302.1|3914554_3915385_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.3	4.4e-36
>prophage 6
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	3974482	4038273	4817335	portal,tail,head,protease,capsid,tRNA	Paracoccus_phage(11.76%)	60	NA	NA
WP_045683374.1|3974482_3976312_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	42.6	1.0e-101
WP_045683376.1|3976395_3976830_-	DUF1489 family protein	NA	NA	NA	NA	NA
WP_045683378.1|3976883_3978296_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_045683380.1|3978783_3979470_+	DUF599 family protein	NA	NA	NA	NA	NA
WP_045683382.1|3979481_3980426_+	DUF1624 domain-containing protein	NA	NA	NA	NA	NA
WP_045683383.1|3980459_3980849_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_045683385.1|3980905_3982315_-	magnesium transporter	NA	NA	NA	NA	NA
WP_045683387.1|3982519_3984814_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA	NA
WP_045683389.1|3984810_3985140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052699930.1|3985415_3988010_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_082074807.1|3988561_3988705_+	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_082074808.1|3988966_3989110_+	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_045683390.1|3989235_3990348_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_045683391.1|3990367_3991066_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_045683392.1|3991186_3992677_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_045683393.1|3992699_3993803_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	38.6	5.0e-19
WP_045683394.1|3994117_3995317_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_052699931.1|3995416_3996820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683396.1|3996840_3997245_-	DUF2155 domain-containing protein	NA	NA	NA	NA	NA
WP_045683398.1|3997349_3997748_-	NADH:ubiquinone oxidoreductase subunit NDUFA12	NA	NA	NA	NA	NA
WP_082074810.1|3997838_3998429_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_045685472.1|3998815_4000318_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_045685474.1|4000616_4000874_+	YjhX family toxin	NA	NA	NA	NA	NA
WP_045685475.1|4001027_4002458_+	DUF1254 domain-containing protein	NA	A0A1J0FA30	Only_Syngen_Nebraska_virus	31.2	7.6e-44
WP_045683403.1|4002553_4002820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683405.1|4002861_4003617_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_045683407.1|4003742_4005338_-	phosphoglycerate dehydrogenase	NA	A0A2R8FCS0	Cedratvirus	36.8	1.9e-43
WP_045683409.1|4005421_4006591_-	phosphoserine transaminase	NA	NA	NA	NA	NA
WP_045683411.1|4007031_4007736_+	porin family protein	NA	O11861	Bartonella_henselae_phage	27.3	2.2e-12
WP_045683413.1|4007908_4008649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045683415.1|4008738_4010097_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_052699932.1|4010248_4013206_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA	NA
WP_045683417.1|4013283_4014708_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_144409612.1|4014717_4015461_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_045683420.1|4015547_4017089_-	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	33.9	1.2e-29
WP_045683422.1|4017194_4017653_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_045683424.1|4017649_4019644_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_045683426.1|4019640_4020087_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_045683428.1|4020083_4021217_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA	NA
WP_045683430.1|4021333_4021750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683432.1|4021873_4023250_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_045683433.1|4023246_4023909_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_045685480.1|4023952_4024174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683434.1|4024347_4024557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045683436.1|4024567_4028413_-|tail	glycoside hydrolase/phage tail family protein	tail	A0A0B5A7K5	Paracoccus_phage	36.5	7.4e-211
WP_045683438.1|4028413_4028854_-	C40 family peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	44.1	6.8e-28
WP_045683440.1|4028850_4029741_-	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	41.0	4.1e-56
WP_045683441.1|4029737_4030367_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	45.6	2.3e-45
WP_045683443.1|4030377_4030950_-|tail	phage tail tape measure protein	tail	A0A1W6JP49	Morganella_phage	34.1	1.5e-11
WP_082074812.1|4030939_4031122_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_045683445.1|4031178_4031547_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_045683447.1|4031543_4031954_-|tail	phage major tail protein, TP901-1 family	tail	I3UM07	Rhodobacter_phage	38.9	1.2e-18
WP_045683450.1|4031987_4032395_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_045685481.1|4032391_4032721_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_045683452.1|4032720_4033287_-|head,tail	phage head-tail connector protein	head,tail	C7BGH1	Burkholderia_phage	30.0	2.5e-06
WP_082074927.1|4033360_4034587_-|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	41.8	8.2e-79
WP_045683456.1|4034626_4035316_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0R6PKF0	Moraxella_phage	44.6	7.2e-32
WP_045683458.1|4035315_4036473_-|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	36.1	8.6e-62
WP_045683460.1|4036551_4036869_-	Dabb family protein	NA	NA	NA	NA	NA
WP_082074813.1|4036968_4038273_-	DNA-packaging protein	NA	A0A1V0DY66	Dinoroseobacter_phage	39.4	6.9e-68
>prophage 7
NZ_CP010803	Martelella endophytica strain YC6887 chromosome, complete genome	4817335	4396996	4403416	4817335		uncultured_Caudovirales_phage(33.33%)	8	NA	NA
WP_179945009.1|4396996_4397785_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	41.5	2.7e-35
WP_045683942.1|4397781_4398438_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_082074830.1|4398508_4398898_+	RidA family protein	NA	M1IAZ8	Acanthocystis_turfacea_Chlorella_virus	39.0	1.1e-13
WP_045683943.1|4398949_4399144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045683944.1|4399445_4400930_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	64.2	5.1e-168
WP_045683947.1|4400941_4401796_+	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	38.7	5.0e-43
WP_045683949.1|4402034_4403126_+	choloylglycine hydrolase family protein	NA	A0A1J0F9I3	Only_Syngen_Nebraska_virus	35.9	5.1e-40
WP_045683952.1|4403206_4403416_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	55.0	8.9e-10
