assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000959465.1_ASM95946v1	NZ_CP009643	Burkholderia mallei strain India86-567-2 chromosome II, complete sequence	1	322624-322769	1,1	PILER-CR,CRISPRCasFinder	no		cas3,csa3	Orphan	GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG,CGGAATGCCCGATCATCGGGATGC	53,24	0	0	NA	NA	NA:NA	2,1	2	Orphan	cas3,WYL,DEDDh,DinG,csa3	NA|201aa|up_7|NZ_CP009643.1_312564_313167_+,NA|66aa|up_3|NZ_CP009643.1_316677_316875_+,NA|74aa|down_5|NZ_CP009643.1_332109_332331_-	NA|348aa|up_9|NZ_CP009643.1_309604_310648_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_8|NZ_CP009643.1_310653_311886_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|201aa|up_7|NZ_CP009643.1_312564_313167_+	NA	NA|147aa|up_6|NZ_CP009643.1_313138_313579_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP009643.1_313913_315029_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP009643.1_315326_316262_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|66aa|up_3|NZ_CP009643.1_316677_316875_+	NA	NA|633aa|up_2|NZ_CP009643.1_316934_318833_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP009643.1_319143_321417_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP009643.1_321549_321945_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP009643.1_323326_324592_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP009643.1_324840_326682_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|601aa|down_2|NZ_CP009643.1_326756_328559_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP009643.1_329087_330119_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP009643.1_330115_331948_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|74aa|down_5|NZ_CP009643.1_332109_332331_-	NA	NA|150aa|down_6|NZ_CP009643.1_332327_332777_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP009643.1_333230_333884_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP009643.1_333951_334386_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|377aa|down_9|NZ_CP009643.1_334791_335922_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_000959465.1_ASM95946v1	NZ_CP009643	Burkholderia mallei strain India86-567-2 chromosome II, complete sequence	2	555095-555187	2	CRISPRCasFinder	no		cas3,csa3	Orphan	TCGCCGCCGCGCGCGACGACGCGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,DinG,csa3	NA|86aa|up_6|NZ_CP009643.1_550862_551120_-,NA|168aa|down_3|NZ_CP009643.1_559796_560300_+,NA|170aa|down_4|NZ_CP009643.1_560357_560867_-	NA|393aa|up_9|NZ_CP009643.1_546348_547527_-	PRK07058, PRK07058, acetate/propionate family kinase	NA|468aa|up_8|NZ_CP009643.1_547523_548927_-	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|598aa|up_7|NZ_CP009643.1_548937_550731_-	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|86aa|up_6|NZ_CP009643.1_550862_551120_-	NA	NA|535aa|up_5|NZ_CP009643.1_551091_552696_+	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|152aa|up_4|NZ_CP009643.1_552685_553141_+	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|164aa|up_3|NZ_CP009643.1_553137_553629_+	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|103aa|up_2|NZ_CP009643.1_553621_553930_+	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|234aa|up_1|NZ_CP009643.1_553926_554628_+	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|84aa|up_0|NZ_CP009643.1_554624_554876_+	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|671aa|down_0|NZ_CP009643.1_555622_557635_+	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|283aa|down_1|NZ_CP009643.1_557631_558480_+	pfam00231, ATP-synt, ATP synthase	NA|342aa|down_2|NZ_CP009643.1_558694_559720_+	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|168aa|down_3|NZ_CP009643.1_559796_560300_+	NA	NA|170aa|down_4|NZ_CP009643.1_560357_560867_-	NA	NA|535aa|down_5|NZ_CP009643.1_561368_562973_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|612aa|down_6|NZ_CP009643.1_563328_565164_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|375aa|down_7|NZ_CP009643.1_565313_566438_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|1072aa|down_8|NZ_CP009643.1_566440_569656_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|509aa|down_9|NZ_CP009643.1_570718_572245_-	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein
GCF_000959465.1_ASM95946v1	NZ_CP009643	Burkholderia mallei strain India86-567-2 chromosome II, complete sequence	3	1422171-1422333	2	PILER-CR	no		cas3,csa3	Orphan	GGCGGGCCGGCCGCCG---------------------------CGCGGGCG	51	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,DinG,csa3	NA|95aa|up_4|NZ_CP009643.1_1417733_1418018_-,NA|47aa|up_3|NZ_CP009643.1_1418415_1418556_-,NA|99aa|down_6|NZ_CP009643.1_1435158_1435455_+	NA|465aa|up_9|NZ_CP009643.1_1409266_1410661_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|230aa|up_8|NZ_CP009643.1_1410657_1411347_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|1078aa|up_7|NZ_CP009643.1_1411353_1414587_-	TIGR00914, Nickel-cobalt-cadmium_resistance_protein_NccA, heavy metal efflux pump, CzcA family	NA|490aa|up_6|NZ_CP009643.1_1414632_1416102_-	TIGR00999, Nickel-cobalt-cadmium_resistance_protein_NccB, Membrane Fusion Protein cluster 2 (function with RND porters)	NA|462aa|up_5|NZ_CP009643.1_1416112_1417498_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|95aa|up_4|NZ_CP009643.1_1417733_1418018_-	NA	NA|47aa|up_3|NZ_CP009643.1_1418415_1418556_-	NA	NA|162aa|up_2|NZ_CP009643.1_1419226_1419712_-	pfam04008, Adenosine_kin, Adenosine specific kinase	NA|162aa|up_1|NZ_CP009643.1_1420041_1420527_+	cd04332, YbaK_like, YbaK-like	NA|452aa|up_0|NZ_CP009643.1_1420794_1422150_+	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter	NA|203aa|down_0|NZ_CP009643.1_1422449_1423058_+	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|667aa|down_1|NZ_CP009643.1_1423196_1425197_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|224aa|down_2|NZ_CP009643.1_1428453_1429125_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|366aa|down_3|NZ_CP009643.1_1429275_1430373_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1034aa|down_4|NZ_CP009643.1_1430369_1433471_+	PRK09579, PRK09579, multidrug efflux RND transporter permease subunit	NA|513aa|down_5|NZ_CP009643.1_1433605_1435144_+	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|99aa|down_6|NZ_CP009643.1_1435158_1435455_+	NA	NA|206aa|down_7|NZ_CP009643.1_1435500_1436118_+	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|566aa|down_8|NZ_CP009643.1_1436114_1437812_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|227aa|down_9|NZ_CP009643.1_1437808_1438489_+	pfam13649, Methyltransf_25, Methyltransferase domain
