assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000959185.1_ASM95918v1	NZ_CP009473	Burkholderia pseudomallei MSHR840 chromosome II, complete sequence	1	634953-635045	1	CRISPRCasFinder	no		csa3,PD-DExK,cas3,DinG	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,PD-DExK	NA|170aa|up_4|NZ_CP009473.1_629272_629782_+,NA|172aa|up_3|NZ_CP009473.1_629839_630355_-,NA	NA|358aa|up_9|NZ_CP009473.1_619326_620400_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|1089aa|up_8|NZ_CP009473.1_620396_623663_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_7|NZ_CP009473.1_623665_624790_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_6|NZ_CP009473.1_624939_626775_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|522aa|up_5|NZ_CP009473.1_627166_628732_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP009473.1_629272_629782_+	NA	NA|172aa|up_3|NZ_CP009473.1_629839_630355_-	NA	NA|342aa|up_2|NZ_CP009473.1_630419_631445_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP009473.1_631683_632532_-	pfam00231, ATP-synt, ATP synthase	NA|663aa|up_0|NZ_CP009473.1_632528_634517_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP009473.1_635263_635512_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP009473.1_635508_636210_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP009473.1_636206_636515_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|167aa|down_3|NZ_CP009473.1_636507_637008_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP009473.1_637004_637460_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|533aa|down_5|NZ_CP009473.1_637449_639048_-	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|598aa|down_6|NZ_CP009473.1_639408_641202_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|468aa|down_7|NZ_CP009473.1_641212_642616_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_8|NZ_CP009473.1_642612_643791_+	PRK07058, PRK07058, acetate/propionate family kinase	NA|478aa|down_9|NZ_CP009473.1_644522_645956_-	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases
GCF_000959185.1_ASM95918v1	NZ_CP009473	Burkholderia pseudomallei MSHR840 chromosome II, complete sequence	2	873770-873924	2	CRISPRCasFinder	no	csa3	csa3,PD-DExK,cas3,DinG	Type I-A	CACGACAGCACGACAGCACGACAGCAC	27	1	7	873877-873897|873877-873897|873877-873897|873877-873897|873877-873897|873877-873897|873877-873897	NZ_CP009473.1_873909-873929|NZ_CP009473.1_873917-873937|NZ_CP009473.1_873925-873945|NZ_CP009474.1_619168-619148|NZ_CP009474.1_619176-619156|NZ_CP009474.1_619184-619164|NZ_CP009474.1_619192-619172	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,PD-DExK	NA|102aa|up_5|NZ_CP009473.1_866168_866474_-,NA|55aa|down_3|NZ_CP009473.1_877535_877700_+,NA|184aa|down_6|NZ_CP009473.1_880619_881171_+,NA|298aa|down_8|NZ_CP009473.1_884630_885524_+	NA|235aa|up_9|NZ_CP009473.1_861577_862282_-	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|305aa|up_8|NZ_CP009473.1_862462_863377_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|446aa|up_7|NZ_CP009473.1_863562_864900_-	PRK02991, PRK02991, D-serine dehydratase; Provisional	NA|314aa|up_6|NZ_CP009473.1_864996_865938_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|102aa|up_5|NZ_CP009473.1_866168_866474_-	NA	csa3|225aa|up_4|NZ_CP009473.1_866933_867608_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|247aa|up_3|NZ_CP009473.1_867680_868421_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|414aa|up_2|NZ_CP009473.1_868425_869667_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|374aa|up_1|NZ_CP009473.1_869713_870835_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|445aa|up_0|NZ_CP009473.1_872176_873511_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|308aa|down_0|NZ_CP009473.1_874233_875157_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|381aa|down_1|NZ_CP009473.1_875221_876364_+	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|283aa|down_2|NZ_CP009473.1_876547_877396_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|55aa|down_3|NZ_CP009473.1_877535_877700_+	NA	NA|275aa|down_4|NZ_CP009473.1_877906_878731_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|468aa|down_5|NZ_CP009473.1_879030_880434_+	PRK07488, PRK07488, indoleacetamide hydrolase	NA|184aa|down_6|NZ_CP009473.1_880619_881171_+	NA	NA|788aa|down_7|NZ_CP009473.1_881725_884089_-	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|298aa|down_8|NZ_CP009473.1_884630_885524_+	NA	NA|97aa|down_9|NZ_CP009473.1_885630_885921_-	pfam00816, Histone_HNS, H-NS histone family
GCF_000959185.1_ASM95918v1	NZ_CP009473	Burkholderia pseudomallei MSHR840 chromosome II, complete sequence	3	1055020-1055105	3	CRISPRCasFinder	no		csa3,PD-DExK,cas3,DinG	Orphan	CGGAATGCCCGATCATCGGGATGC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,PD-DExK	NA|197aa|up_3|NZ_CP009473.1_1048666_1049257_+,NA|110aa|down_5|NZ_CP009473.1_1064391_1064721_-	NA|486aa|up_9|NZ_CP009473.1_1040534_1041992_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|348aa|up_8|NZ_CP009473.1_1041993_1043037_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_7|NZ_CP009473.1_1043042_1044275_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|147aa|up_6|NZ_CP009473.1_1045524_1045965_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP009473.1_1046302_1047418_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP009473.1_1047715_1048651_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|197aa|up_3|NZ_CP009473.1_1048666_1049257_+	NA	NA|633aa|up_2|NZ_CP009473.1_1049316_1051215_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP009473.1_1051498_1053772_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP009473.1_1053904_1054300_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP009473.1_1055682_1056948_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP009473.1_1057163_1059005_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP009473.1_1059079_1060891_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP009473.1_1061409_1062441_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP009473.1_1062437_1064270_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|110aa|down_5|NZ_CP009473.1_1064391_1064721_-	NA	NA|150aa|down_6|NZ_CP009473.1_1064724_1065174_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP009473.1_1065627_1066281_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|146aa|down_8|NZ_CP009473.1_1066348_1066786_-	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|380aa|down_9|NZ_CP009473.1_1067191_1068331_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_000959185.1_ASM95918v1	NZ_CP009473	Burkholderia pseudomallei MSHR840 chromosome II, complete sequence	4	2504173-2504337	1	PILER-CR	no		csa3,PD-DExK,cas3,DinG	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,PD-DExK	NA|48aa|up_9|NZ_CP009473.1_2494919_2495063_+,NA|162aa|up_4|NZ_CP009473.1_2497860_2498346_+,NA|166aa|down_2|NZ_CP009473.1_2507846_2508344_+,NA|84aa|down_4|NZ_CP009473.1_2509519_2509771_-,NA|83aa|down_7|NZ_CP009473.1_2513270_2513519_-	NA|48aa|up_9|NZ_CP009473.1_2494919_2495063_+	NA	NA|174aa|up_8|NZ_CP009473.1_2495078_2495600_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_7|NZ_CP009473.1_2495596_2496421_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_6|NZ_CP009473.1_2496478_2497465_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_5|NZ_CP009473.1_2497504_2497864_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|162aa|up_4|NZ_CP009473.1_2497860_2498346_+	NA	NA|170aa|up_3|NZ_CP009473.1_2498367_2498877_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP009473.1_2498873_2499878_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|898aa|up_1|NZ_CP009473.1_2500004_2502698_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP009473.1_2502916_2503897_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|602aa|down_0|NZ_CP009473.1_2504971_2506777_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|337aa|down_1|NZ_CP009473.1_2506773_2507784_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|166aa|down_2|NZ_CP009473.1_2507846_2508344_+	NA	NA|231aa|down_3|NZ_CP009473.1_2508502_2509195_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_4|NZ_CP009473.1_2509519_2509771_-	NA	NA|420aa|down_5|NZ_CP009473.1_2509933_2511193_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|490aa|down_6|NZ_CP009473.1_2511396_2512866_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_7|NZ_CP009473.1_2513270_2513519_-	NA	NA|91aa|down_8|NZ_CP009473.1_2514165_2514438_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)	NA|465aa|down_9|NZ_CP009473.1_2514532_2515927_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase
GCF_000959185.1_ASM95918v1	NZ_CP009474	Burkholderia pseudomallei MSHR840 chromosome I, complete sequence	1	1380566-1380833	1	CRT	no		WYL,cas3,DEDDh,csa3,DinG	Orphan	NAGCGCTGAAGCGCTGAC	18	0	0	NA	NA	NA	5	5	Orphan	WYL,cas3,DEDDh,csa3,DinG,PD-DExK	NA,NA	NA|296aa|up_9|NZ_CP009474.1_1371164_1372052_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|378aa|up_8|NZ_CP009474.1_1372059_1373193_+	cd01117, YbiR_permease, Putative anion permease YbiR	NA|177aa|up_7|NZ_CP009474.1_1373463_1373994_+	pfam03899, ATP-synt_I, ATP synthase I chain	NA|284aa|up_6|NZ_CP009474.1_1374106_1374958_+	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|90aa|up_5|NZ_CP009474.1_1375034_1375304_+	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated	NA|157aa|up_4|NZ_CP009474.1_1375431_1375902_+	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|180aa|up_3|NZ_CP009474.1_1375904_1376444_+	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated	NA|514aa|up_2|NZ_CP009474.1_1376490_1378032_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|292aa|up_1|NZ_CP009474.1_1378103_1378979_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|465aa|up_0|NZ_CP009474.1_1379058_1380453_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|577aa|down_0|NZ_CP009474.1_1381447_1383178_+	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|45aa|down_1|NZ_CP009474.1_1383637_1383772_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|114aa|down_2|NZ_CP009474.1_1383737_1384079_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|262aa|down_3|NZ_CP009474.1_1384278_1385064_-	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|365aa|down_4|NZ_CP009474.1_1385203_1386298_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|756aa|down_5|NZ_CP009474.1_1386738_1389006_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|57aa|down_6|NZ_CP009474.1_1389016_1389187_-	cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)	NA|1310aa|down_7|NZ_CP009474.1_1389470_1393400_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|380aa|down_8|NZ_CP009474.1_1393484_1394624_+	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|516aa|down_9|NZ_CP009474.1_1394855_1396403_-	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13
