assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	1	13315-13443	1	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GGCGGAGCCCTCCCTCTGCCTTTGGTACAAGTACCAAAAAAG	42	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|128aa|up_0|NZ_LN824141.1_12816_13200_+,NA	NA|138aa|up_9|NZ_LN824141.1_2721_3135_-	cd17906, CheX, chemotaxis phosphatase CheX	NA|471aa|up_8|NZ_LN824141.1_3426_4839_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|489aa|up_7|NZ_LN824141.1_4847_6314_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|178aa|up_6|NZ_LN824141.1_6352_6886_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|133aa|up_5|NZ_LN824141.1_6933_7332_-	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]	NA|452aa|up_4|NZ_LN824141.1_7306_8662_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|375aa|up_3|NZ_LN824141.1_9616_10741_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|218aa|up_2|NZ_LN824141.1_10740_11394_-	pfam01025, GrpE, GrpE	NA|336aa|up_1|NZ_LN824141.1_11582_12590_-	COG1420, HrcA, Transcriptional regulator of heat shock gene [Transcription]	NA|128aa|up_0|NZ_LN824141.1_12816_13200_+	NA	NA|501aa|down_0|NZ_LN824141.1_13574_15077_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|430aa|down_1|NZ_LN824141.1_15077_16367_+	TIGR01143, murF, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	NA|315aa|down_2|NZ_LN824141.1_16632_17577_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|440aa|down_3|NZ_LN824141.1_17573_18893_+	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]	NA|376aa|down_4|NZ_LN824141.1_18879_20007_+	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|357aa|down_5|NZ_LN824141.1_19993_21064_+	cd03785, GT28_MurG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA|452aa|down_6|NZ_LN824141.1_21125_22481_+	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|896aa|down_7|NZ_LN824141.1_23184_25872_+	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]	NA|204aa|down_8|NZ_LN824141.1_25878_26490_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|423aa|down_9|NZ_LN824141.1_26497_27766_-	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	2	28927-29049	2	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	AACTATTTGGTACTTAAGGAAGGAAGGAGGGCTTTGCCC	39	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|149aa|up_1|NZ_LN824141.1_27810_28257_-,NA|172aa|up_0|NZ_LN824141.1_28270_28786_-,NA|208aa|down_0|NZ_LN824141.1_29127_29751_-	NA|315aa|up_9|NZ_LN824141.1_16632_17577_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|440aa|up_8|NZ_LN824141.1_17573_18893_+	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]	NA|376aa|up_7|NZ_LN824141.1_18879_20007_+	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|357aa|up_6|NZ_LN824141.1_19993_21064_+	cd03785, GT28_MurG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA|452aa|up_5|NZ_LN824141.1_21125_22481_+	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|896aa|up_4|NZ_LN824141.1_23184_25872_+	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]	NA|204aa|up_3|NZ_LN824141.1_25878_26490_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|423aa|up_2|NZ_LN824141.1_26497_27766_-	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA|149aa|up_1|NZ_LN824141.1_27810_28257_-	NA	NA|172aa|up_0|NZ_LN824141.1_28270_28786_-	NA	NA|208aa|down_0|NZ_LN824141.1_29127_29751_-	NA	NA|257aa|down_1|NZ_LN824141.1_29747_30518_-	pfam01734, Patatin, Patatin-like phospholipase	NA|268aa|down_2|NZ_LN824141.1_30514_31318_-	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	NA|691aa|down_3|NZ_LN824141.1_31383_33456_-	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|566aa|down_4|NZ_LN824141.1_33459_35157_-	pfam08308, PEGA, PEGA domain	NA|148aa|down_5|NZ_LN824141.1_35167_35611_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|454aa|down_6|NZ_LN824141.1_35848_37210_+	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM	NA|833aa|down_7|NZ_LN824141.1_37262_39761_-	cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins	NA|186aa|down_8|NZ_LN824141.1_40272_40830_-	PRK00529, PRK00529, elongation factor P; Validated	NA|66aa|down_9|NZ_LN824141.1_41168_41366_+	COG1278, CspC, Cold shock proteins [Transcription]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	3	90413-90518	3	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	TTTTTCTACTTGTACCAAGGGAAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|133aa|up_8|NZ_LN824141.1_83659_84058_-,NA|209aa|up_1|NZ_LN824141.1_88993_89620_-,NA|499aa|down_1|NZ_LN824141.1_91794_93291_+,NA|486aa|down_2|NZ_LN824141.1_93316_94774_+	NA|215aa|up_9|NZ_LN824141.1_82934_83579_-	PRK02868, PRK02868, hypothetical protein; Provisional	NA|133aa|up_8|NZ_LN824141.1_83659_84058_-	NA	NA|177aa|up_7|NZ_LN824141.1_84075_84606_-	pfam01135, PCMT, Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	NA|244aa|up_6|NZ_LN824141.1_84639_85371_-	COG0327, COG0327, Uncharacterized conserved protein [Function unknown]	NA|164aa|up_5|NZ_LN824141.1_85376_85868_-	pfam04008, Adenosine_kin, Adenosine specific kinase	NA|157aa|up_4|NZ_LN824141.1_85943_86414_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|265aa|up_3|NZ_LN824141.1_86679_87474_-	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|457aa|up_2|NZ_LN824141.1_87602_88973_-	PRK13237, PRK13237, tyrosine phenol-lyase; Provisional	NA|209aa|up_1|NZ_LN824141.1_88993_89620_-	NA	NA|131aa|up_0|NZ_LN824141.1_89892_90285_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|195aa|down_0|NZ_LN824141.1_90985_91570_-	PRK04164, PRK04164, hypothetical protein; Provisional	NA|499aa|down_1|NZ_LN824141.1_91794_93291_+	NA	NA|486aa|down_2|NZ_LN824141.1_93316_94774_+	NA	NA|225aa|down_3|NZ_LN824141.1_94905_95580_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|449aa|down_4|NZ_LN824141.1_95542_96889_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|378aa|down_5|NZ_LN824141.1_96979_98113_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|293aa|down_6|NZ_LN824141.1_98151_99030_+	PRK11820, PRK11820, YicC family protein	NA|96aa|down_7|NZ_LN824141.1_99130_99418_+	PRK04323, PRK04323, hypothetical protein; Provisional	NA|216aa|down_8|NZ_LN824141.1_99421_100069_+	PRK00300, gmk, guanylate kinase; Provisional	NA|64aa|down_9|NZ_LN824141.1_100052_100244_+	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	4	237029-237143	4	CRISPRCasFinder	no	cas3HD	cas3HD,cas3,csa3,DEDDh,cas6	Unclear	GAAAGAGGGAGGGCTCCGCCCTTAACCCA	29	0	0	NA	NA	NA	1	1	Unclear	cas3HD,cas3,csa3,DEDDh,cas6	NA|209aa|up_5|NZ_LN824141.1_230948_231575_+,NA	NA|187aa|up_9|NZ_LN824141.1_227582_228143_-	pfam02417, Chromate_transp, Chromate transporter	NA|236aa|up_8|NZ_LN824141.1_228268_228976_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|152aa|up_7|NZ_LN824141.1_229136_229592_-	pfam04308, RNaseH_like, Ribonuclease H-like	NA|289aa|up_6|NZ_LN824141.1_229800_230667_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|209aa|up_5|NZ_LN824141.1_230948_231575_+	NA	NA|346aa|up_4|NZ_LN824141.1_231593_232631_+	cd06502, TA_like, Low-specificity threonine aldolase (TA)	NA|88aa|up_3|NZ_LN824141.1_232633_232897_+	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|256aa|up_2|NZ_LN824141.1_232902_233670_-	COG1947, IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]	NA|729aa|up_1|NZ_LN824141.1_233693_235880_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|307aa|up_0|NZ_LN824141.1_235884_236805_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|284aa|down_0|NZ_LN824141.1_237196_238048_-	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|332aa|down_1|NZ_LN824141.1_238058_239054_-	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|232aa|down_2|NZ_LN824141.1_239241_239937_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|314aa|down_3|NZ_LN824141.1_240205_241147_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|413aa|down_4|NZ_LN824141.1_241121_242360_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|835aa|down_5|NZ_LN824141.1_242648_245153_+	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|350aa|down_6|NZ_LN824141.1_245255_246305_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|456aa|down_7|NZ_LN824141.1_246346_247714_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|324aa|down_8|NZ_LN824141.1_247720_248692_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|344aa|down_9|NZ_LN824141.1_248684_249716_+	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	5	624747-624890	5	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GTACTTGTAGGTAGGAAGGGCGGAGGGCTTCGCCCTAAACCC	42	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA|452aa|down_4|NZ_LN824141.1_629640_630996_-,NA|201aa|down_7|NZ_LN824141.1_632578_633181_-	NA|384aa|up_9|NZ_LN824141.1_614886_616038_+	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily	NA|131aa|up_8|NZ_LN824141.1_616614_617007_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|203aa|up_7|NZ_LN824141.1_617019_617628_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|416aa|up_6|NZ_LN824141.1_617624_618872_-	COG2379, GckA, Putative glycerate kinase [Carbohydrate transport and metabolism]	NA|373aa|up_5|NZ_LN824141.1_618888_620007_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|323aa|up_4|NZ_LN824141.1_620143_621112_+	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|122aa|up_3|NZ_LN824141.1_621235_621601_-	pfam13788, DUF4180, Domain of unknown function (DUF4180)	NA|453aa|up_2|NZ_LN824141.1_621648_623007_-	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|114aa|up_1|NZ_LN824141.1_623011_623353_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|323aa|up_0|NZ_LN824141.1_623645_624614_-	COG1606, COG1606, ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]	NA|297aa|down_0|NZ_LN824141.1_625069_625960_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|557aa|down_1|NZ_LN824141.1_625956_627627_-	pfam16949, ABC_tran_2, Putative ATP-binding cassette	NA|251aa|down_2|NZ_LN824141.1_627595_628348_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|411aa|down_3|NZ_LN824141.1_628411_629644_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|452aa|down_4|NZ_LN824141.1_629640_630996_-	NA	NA|325aa|down_5|NZ_LN824141.1_631012_631987_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|185aa|down_6|NZ_LN824141.1_632037_632592_-	pfam14385, DUF4416, Domain of unknown function (DUF4416)	NA|201aa|down_7|NZ_LN824141.1_632578_633181_-	NA	NA|560aa|down_8|NZ_LN824141.1_633356_635036_+	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM	NA|134aa|down_9|NZ_LN824141.1_635360_635762_+	cd02071, MM_CoA_mut_B12_BD, methylmalonyl CoA mutase B12 binding domain
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	6	907885-907998	6	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GCCCTAGACCCAGCATAAATTCAAAAAA	28	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA	NA|176aa|up_9|NZ_LN824141.1_897312_897840_+	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|94aa|up_8|NZ_LN824141.1_897850_898132_+	pfam04456, DUF503, Protein of unknown function (DUF503)	NA|428aa|up_7|NZ_LN824141.1_898215_899499_-	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|394aa|up_6|NZ_LN824141.1_899773_900955_+	cd17333, MFS_FucP_MFSD4_like, Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins	NA|196aa|up_5|NZ_LN824141.1_901121_901709_+	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|272aa|up_4|NZ_LN824141.1_901710_902526_-	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|365aa|up_3|NZ_LN824141.1_902690_903785_-	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea	NA|309aa|up_2|NZ_LN824141.1_904120_905047_+	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|497aa|up_1|NZ_LN824141.1_905102_906593_+	PRK00047, glpK, glycerol kinase GlpK	NA|369aa|up_0|NZ_LN824141.1_906685_907792_-	COG2872, COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only]	NA|309aa|down_0|NZ_LN824141.1_910285_911212_-	PRK13022, secF, protein translocase subunit SecF	NA|473aa|down_1|NZ_LN824141.1_911211_912630_-	TIGR01129, Protein_translocase_subunit_SecD, protein-export membrane protein SecD	NA|141aa|down_2|NZ_LN824141.1_912683_913106_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|201aa|down_3|NZ_LN824141.1_913343_913946_+	PRK13992, minC, septum site-determining protein MinC	NA|347aa|down_4|NZ_LN824141.1_913972_915013_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|349aa|down_5|NZ_LN824141.1_915009_916056_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|335aa|down_6|NZ_LN824141.1_916039_917044_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|128aa|down_7|NZ_LN824141.1_917085_917469_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|213aa|down_8|NZ_LN824141.1_917512_918151_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|333aa|down_9|NZ_LN824141.1_918152_919151_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	7	966300-966380	7	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GCGTATAGCACGTCTCTACAACT	23	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA|85aa|down_3|NZ_LN824141.1_969991_970246_-,NA|314aa|down_8|NZ_LN824141.1_976834_977776_+	NA|536aa|up_9|NZ_LN824141.1_954567_956175_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|473aa|up_8|NZ_LN824141.1_956226_957645_-	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins	NA|176aa|up_7|NZ_LN824141.1_957655_958183_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|311aa|up_6|NZ_LN824141.1_958196_959129_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|414aa|up_5|NZ_LN824141.1_959487_960729_+	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold	NA|301aa|up_4|NZ_LN824141.1_960849_961752_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|280aa|up_3|NZ_LN824141.1_961778_962618_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|442aa|up_2|NZ_LN824141.1_962633_963959_+	cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily	NA|455aa|up_1|NZ_LN824141.1_964025_965390_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|203aa|up_0|NZ_LN824141.1_965498_966107_-	TIGR01367, Orotate_phosphoribosyltransferase, orotate phosphoribosyltransferase, Thermus family	NA|251aa|down_0|NZ_LN824141.1_966469_967222_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|442aa|down_1|NZ_LN824141.1_967240_968566_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|315aa|down_2|NZ_LN824141.1_969069_970014_-	pfam07136, DUF1385, Protein of unknown function (DUF1385)	NA|85aa|down_3|NZ_LN824141.1_969991_970246_-	NA	NA|297aa|down_4|NZ_LN824141.1_970966_971857_+	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|338aa|down_5|NZ_LN824141.1_971853_972867_+	pfam01032, FecCD, FecCD transport family	NA|257aa|down_6|NZ_LN824141.1_972863_973634_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|730aa|down_7|NZ_LN824141.1_974083_976273_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|314aa|down_8|NZ_LN824141.1_976834_977776_+	NA	NA|123aa|down_9|NZ_LN824141.1_977791_978160_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	8	973648-973735	8	CRISPRCasFinder	no	csa3	cas3HD,cas3,csa3,DEDDh,cas6	Type I-A	AGCGTTGATTATTAGTTGTAGAGACGTGCTA	31	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|85aa|up_3|NZ_LN824141.1_969991_970246_-,NA|314aa|down_1|NZ_LN824141.1_976834_977776_+,NA|197aa|down_3|NZ_LN824141.1_978140_978731_+,NA|336aa|down_5|NZ_LN824141.1_979600_980608_+,NA|160aa|down_8|NZ_LN824141.1_982448_982928_-	NA|442aa|up_9|NZ_LN824141.1_962633_963959_+	cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily	NA|455aa|up_8|NZ_LN824141.1_964025_965390_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|203aa|up_7|NZ_LN824141.1_965498_966107_-	TIGR01367, Orotate_phosphoribosyltransferase, orotate phosphoribosyltransferase, Thermus family	NA|251aa|up_6|NZ_LN824141.1_966469_967222_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|442aa|up_5|NZ_LN824141.1_967240_968566_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|315aa|up_4|NZ_LN824141.1_969069_970014_-	pfam07136, DUF1385, Protein of unknown function (DUF1385)	NA|85aa|up_3|NZ_LN824141.1_969991_970246_-	NA	NA|297aa|up_2|NZ_LN824141.1_970966_971857_+	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|338aa|up_1|NZ_LN824141.1_971853_972867_+	pfam01032, FecCD, FecCD transport family	NA|257aa|up_0|NZ_LN824141.1_972863_973634_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|730aa|down_0|NZ_LN824141.1_974083_976273_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|314aa|down_1|NZ_LN824141.1_976834_977776_+	NA	NA|123aa|down_2|NZ_LN824141.1_977791_978160_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|197aa|down_3|NZ_LN824141.1_978140_978731_+	NA	NA|279aa|down_4|NZ_LN824141.1_978727_979564_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|336aa|down_5|NZ_LN824141.1_979600_980608_+	NA	NA|71aa|down_6|NZ_LN824141.1_980637_980850_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|442aa|down_7|NZ_LN824141.1_980864_982190_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|160aa|down_8|NZ_LN824141.1_982448_982928_-	NA	NA|559aa|down_9|NZ_LN824141.1_983158_984835_-	pfam16949, ABC_tran_2, Putative ATP-binding cassette
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	9	1059459-1059722	9	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	TTTAAAACCAGGAGACGCCCATATAGGTCGTCTCTACA	38	0	0	NA	NA	NA	3	3	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|94aa|up_9|NZ_LN824141.1_1049293_1049575_+,NA|49aa|down_1|NZ_LN824141.1_1061050_1061197_+,NA|74aa|down_2|NZ_LN824141.1_1061230_1061452_+	NA|94aa|up_9|NZ_LN824141.1_1049293_1049575_+	NA	NA|156aa|up_8|NZ_LN824141.1_1049659_1050127_+	pfam13276, HTH_21, HTH-like domain	NA|165aa|up_7|NZ_LN824141.1_1050051_1050546_+	pfam00665, rve, Integrase core domain	NA|365aa|up_6|NZ_LN824141.1_1050743_1051838_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|464aa|up_5|NZ_LN824141.1_1051894_1053286_+	pfam04932, Wzy_C, O-Antigen ligase	NA|138aa|up_4|NZ_LN824141.1_1053795_1054209_+	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	NA|57aa|up_3|NZ_LN824141.1_1054872_1055043_+	pfam00912, Transgly, Transglycosylase	NA|171aa|up_2|NZ_LN824141.1_1055085_1055598_+	TIGR04176, hypothetical_protein, EPS-associated transcriptional regulator, MarR family	NA|396aa|up_1|NZ_LN824141.1_1055629_1056817_+	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins	NA|485aa|up_0|NZ_LN824141.1_1057031_1058486_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|129aa|down_0|NZ_LN824141.1_1060304_1060691_+	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family	NA|49aa|down_1|NZ_LN824141.1_1061050_1061197_+	NA	NA|74aa|down_2|NZ_LN824141.1_1061230_1061452_+	NA	NA|387aa|down_3|NZ_LN824141.1_1061748_1062909_+	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|331aa|down_4|NZ_LN824141.1_1062920_1063913_+	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only]	NA|214aa|down_5|NZ_LN824141.1_1066739_1067381_+	PRK08869, PRK08869, polar flagellin E	NA|67aa|down_6|NZ_LN824141.1_1067761_1067962_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|67aa|down_7|NZ_LN824141.1_1068323_1068524_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|209aa|down_8|NZ_LN824141.1_1069343_1069970_-	pfam08242, Methyltransf_12, Methyltransferase domain	NA|791aa|down_9|NZ_LN824141.1_1070026_1072399_-	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	10	1088665-1088754	10	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	AGACGCCCGTATAGGGCGTCTCTACAT	27	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|59aa|up_7|NZ_LN824141.1_1082844_1083021_-,NA|192aa|up_3|NZ_LN824141.1_1085591_1086167_+,NA|145aa|up_2|NZ_LN824141.1_1086132_1086567_+,NA|166aa|up_0|NZ_LN824141.1_1088045_1088543_+,NA	NA|485aa|up_9|NZ_LN824141.1_1080831_1082286_+	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|154aa|up_8|NZ_LN824141.1_1082347_1082809_+	PRK09956, PRK09956, ISNCY family transposase	NA|59aa|up_7|NZ_LN824141.1_1082844_1083021_-	NA	NA|367aa|up_6|NZ_LN824141.1_1083163_1084264_-	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|116aa|up_5|NZ_LN824141.1_1084503_1084851_-	pfam07653, SH3_2, Variant SH3 domain	NA|133aa|up_4|NZ_LN824141.1_1085137_1085536_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|192aa|up_3|NZ_LN824141.1_1085591_1086167_+	NA	NA|145aa|up_2|NZ_LN824141.1_1086132_1086567_+	NA	NA|295aa|up_1|NZ_LN824141.1_1086865_1087750_+	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc	NA|166aa|up_0|NZ_LN824141.1_1088045_1088543_+	NA	NA|360aa|down_0|NZ_LN824141.1_1088779_1089859_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|564aa|down_1|NZ_LN824141.1_1089872_1091564_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|328aa|down_2|NZ_LN824141.1_1091628_1092612_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|256aa|down_3|NZ_LN824141.1_1092792_1093560_-	pfam13057, DUF3919, Protein of unknown function (DUF3919)	NA|477aa|down_4|NZ_LN824141.1_1093549_1094980_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|228aa|down_5|NZ_LN824141.1_1094969_1095653_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|83aa|down_6|NZ_LN824141.1_1096667_1096916_+	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|875aa|down_7|NZ_LN824141.1_1096959_1099584_-	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|516aa|down_8|NZ_LN824141.1_1099711_1101259_-	PRK12806, PRK12806, flagellin; Provisional	NA|379aa|down_9|NZ_LN824141.1_1102495_1103632_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	11	1134429-1134639	1,1	CRT,PILER-CR	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	TAATTATTAGTTGTAGAGACGTGC,TTATACCCACCATTAATTATTAGTTGTAGAGACGTGCTACACGCGCGTCTC	24,51	0	0	NA	NA	NA:NA	3,2	3	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA	NA|213aa|up_9|NZ_LN824141.1_1121531_1122170_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|507aa|up_8|NZ_LN824141.1_1122851_1124372_-	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|332aa|up_7|NZ_LN824141.1_1124390_1125386_-	pfam13088, BNR_2, BNR repeat-like domain	NA|472aa|up_6|NZ_LN824141.1_1125439_1126855_-	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins	NA|303aa|up_5|NZ_LN824141.1_1126952_1127861_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|274aa|up_4|NZ_LN824141.1_1127934_1128756_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|293aa|up_3|NZ_LN824141.1_1128772_1129651_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|419aa|up_2|NZ_LN824141.1_1129721_1130978_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|342aa|up_1|NZ_LN824141.1_1131107_1132133_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|287aa|up_0|NZ_LN824141.1_1132508_1133369_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|259aa|down_0|NZ_LN824141.1_1138642_1139419_-	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|392aa|down_1|NZ_LN824141.1_1139538_1140714_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|207aa|down_2|NZ_LN824141.1_1141218_1141839_-	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP)	NA|255aa|down_3|NZ_LN824141.1_1141831_1142596_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|342aa|down_4|NZ_LN824141.1_1142757_1143783_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|195aa|down_5|NZ_LN824141.1_1143775_1144360_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|510aa|down_6|NZ_LN824141.1_1144376_1145906_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|142aa|down_7|NZ_LN824141.1_1146394_1146820_+	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL	NA|251aa|down_8|NZ_LN824141.1_1146816_1147569_+	pfam07722, Peptidase_C26, Peptidase C26	NA|407aa|down_9|NZ_LN824141.1_1147634_1148855_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	12	1134826-1138285	11,2,2	CRISPRCasFinder,CRT,PILER-CR	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GTTTCCATTCCTCATAGGTAGGATAAGAAC,GTTTCCATTCCTCATAGGTAGGATAAGAAC,GTTTCCATTCCTCATAGGTAGGATAAGAAC	30,30,30	0	0	NA	NA	NA:NA:NA	51,51,51	51	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA	NA|213aa|up_9|NZ_LN824141.1_1121531_1122170_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|507aa|up_8|NZ_LN824141.1_1122851_1124372_-	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|332aa|up_7|NZ_LN824141.1_1124390_1125386_-	pfam13088, BNR_2, BNR repeat-like domain	NA|472aa|up_6|NZ_LN824141.1_1125439_1126855_-	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins	NA|303aa|up_5|NZ_LN824141.1_1126952_1127861_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|274aa|up_4|NZ_LN824141.1_1127934_1128756_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|293aa|up_3|NZ_LN824141.1_1128772_1129651_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|419aa|up_2|NZ_LN824141.1_1129721_1130978_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|342aa|up_1|NZ_LN824141.1_1131107_1132133_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|287aa|up_0|NZ_LN824141.1_1132508_1133369_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|259aa|down_0|NZ_LN824141.1_1138642_1139419_-	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|392aa|down_1|NZ_LN824141.1_1139538_1140714_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|207aa|down_2|NZ_LN824141.1_1141218_1141839_-	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP)	NA|255aa|down_3|NZ_LN824141.1_1141831_1142596_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|342aa|down_4|NZ_LN824141.1_1142757_1143783_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|195aa|down_5|NZ_LN824141.1_1143775_1144360_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|510aa|down_6|NZ_LN824141.1_1144376_1145906_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|142aa|down_7|NZ_LN824141.1_1146394_1146820_+	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL	NA|251aa|down_8|NZ_LN824141.1_1146816_1147569_+	pfam07722, Peptidase_C26, Peptidase C26	NA|407aa|down_9|NZ_LN824141.1_1147634_1148855_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	13	1165895-1166012	12	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GCCCTGGACCCGTTATAAATTCAAAAACAGTAAT	34	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA	NA|308aa|up_9|NZ_LN824141.1_1157553_1158477_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|160aa|up_8|NZ_LN824141.1_1158540_1159020_+	PRK10657, PRK10657, isoaspartyl dipeptidase; Provisional	NA|96aa|up_7|NZ_LN824141.1_1159313_1159601_+	pfam17253, DUF5320, Family of unknown function (DUF5320)	NA|282aa|up_6|NZ_LN824141.1_1159692_1160538_+	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]	NA|289aa|up_5|NZ_LN824141.1_1160534_1161401_+	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]	NA|109aa|up_4|NZ_LN824141.1_1161542_1161869_+	COG1433, COG1433, Uncharacterized conserved protein [Function unknown]	NA|122aa|up_3|NZ_LN824141.1_1161888_1162254_+	cd00851, MTH1175, This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme	NA|133aa|up_2|NZ_LN824141.1_1162266_1162665_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|641aa|up_1|NZ_LN824141.1_1162713_1164636_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|355aa|up_0|NZ_LN824141.1_1164659_1165724_-	PRK00591, prfA, peptide chain release factor 1; Validated	NA|292aa|down_0|NZ_LN824141.1_1166031_1166907_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|667aa|down_1|NZ_LN824141.1_1167063_1169064_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|163aa|down_2|NZ_LN824141.1_1169121_1169610_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|396aa|down_3|NZ_LN824141.1_1169781_1170969_-	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|418aa|down_4|NZ_LN824141.1_1170975_1172229_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|291aa|down_5|NZ_LN824141.1_1172234_1173107_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|402aa|down_6|NZ_LN824141.1_1173223_1174429_-	cd14747, PBP2_MalE, Maltose-binding protein MalE; possesses type 2 periplasmic binding fold	NA|474aa|down_7|NZ_LN824141.1_1174532_1175954_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|362aa|down_8|NZ_LN824141.1_1175968_1177054_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|155aa|down_9|NZ_LN824141.1_1177378_1177843_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	14	1305995-1306123	13	CRISPRCasFinder	no	DEDDh	cas3HD,cas3,csa3,DEDDh,cas6	Unclear	AGCTAAGAAGGGTGAGGGCTGCGCCCTGTTACCCTCATAAATTCAAAA	48	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|237aa|up_2|NZ_LN824141.1_1300784_1301495_-,NA|258aa|down_8|NZ_LN824141.1_1321549_1322323_+	NA|430aa|up_9|NZ_LN824141.1_1293201_1294491_+	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|85aa|up_8|NZ_LN824141.1_1294543_1294798_+	pfam16256, DUF4911, Domain of unknown function (DUF4911)	NA|372aa|up_7|NZ_LN824141.1_1294772_1295888_+	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|64aa|up_6|NZ_LN824141.1_1296051_1296243_+	PRK13807, PRK13807, maltose phosphorylase; Provisional	NA|404aa|up_5|NZ_LN824141.1_1296287_1297499_-	PRK04135, PRK04135, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|775aa|up_4|NZ_LN824141.1_1297817_1300142_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|163aa|up_3|NZ_LN824141.1_1300268_1300757_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|237aa|up_2|NZ_LN824141.1_1300784_1301495_-	NA	NA|212aa|up_1|NZ_LN824141.1_1301578_1302214_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|1038aa|up_0|NZ_LN824141.1_1302778_1305892_-	cd03143, A4_beta-galactosidase_middle_domain, A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain	NA|250aa|down_0|NZ_LN824141.1_1306428_1307178_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|486aa|down_1|NZ_LN824141.1_1307225_1308683_-	cd05297, GH4_alpha_glucosidase_galactosidase, Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases	NA|326aa|down_2|NZ_LN824141.1_1313650_1314628_-	cd08234, threonine_DH_like, L-threonine dehydrogenase	NA|585aa|down_3|NZ_LN824141.1_1314846_1316601_+	cd09610, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|191aa|down_4|NZ_LN824141.1_1316635_1317208_+	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|390aa|down_5|NZ_LN824141.1_1317572_1318742_+	PRK04149, sat, sulfate adenylyltransferase; Reviewed	NA|290aa|down_6|NZ_LN824141.1_1318758_1319628_+	cd09116, PLDc_Nuc_like, Catalytic domain of EDTA-resistant nuclease Nuc, vertebrate phospholipase D6, and similar proteins	NA|576aa|down_7|NZ_LN824141.1_1319772_1321500_+	PRK13981, PRK13981, NAD synthetase; Provisional	NA|258aa|down_8|NZ_LN824141.1_1321549_1322323_+	NA	NA|856aa|down_9|NZ_LN824141.1_1322353_1324921_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	15	1317329-1317447	14	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GATGTTTTTGATTTATATAGGGTCTAGGGCGAAGCCCCCCTTCT	44	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|237aa|up_7|NZ_LN824141.1_1300784_1301495_-,NA|258aa|down_3|NZ_LN824141.1_1321549_1322323_+,NA|144aa|down_6|NZ_LN824141.1_1328167_1328599_+	NA|775aa|up_9|NZ_LN824141.1_1297817_1300142_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|163aa|up_8|NZ_LN824141.1_1300268_1300757_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|237aa|up_7|NZ_LN824141.1_1300784_1301495_-	NA	NA|212aa|up_6|NZ_LN824141.1_1301578_1302214_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|1038aa|up_5|NZ_LN824141.1_1302778_1305892_-	cd03143, A4_beta-galactosidase_middle_domain, A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain	NA|250aa|up_4|NZ_LN824141.1_1306428_1307178_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|486aa|up_3|NZ_LN824141.1_1307225_1308683_-	cd05297, GH4_alpha_glucosidase_galactosidase, Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases	NA|326aa|up_2|NZ_LN824141.1_1313650_1314628_-	cd08234, threonine_DH_like, L-threonine dehydrogenase	NA|585aa|up_1|NZ_LN824141.1_1314846_1316601_+	cd09610, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|191aa|up_0|NZ_LN824141.1_1316635_1317208_+	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|390aa|down_0|NZ_LN824141.1_1317572_1318742_+	PRK04149, sat, sulfate adenylyltransferase; Reviewed	NA|290aa|down_1|NZ_LN824141.1_1318758_1319628_+	cd09116, PLDc_Nuc_like, Catalytic domain of EDTA-resistant nuclease Nuc, vertebrate phospholipase D6, and similar proteins	NA|576aa|down_2|NZ_LN824141.1_1319772_1321500_+	PRK13981, PRK13981, NAD synthetase; Provisional	NA|258aa|down_3|NZ_LN824141.1_1321549_1322323_+	NA	NA|856aa|down_4|NZ_LN824141.1_1322353_1324921_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	NA|838aa|down_5|NZ_LN824141.1_1325028_1327542_+	PRK08665, PRK08665, vitamin B12-dependent ribonucleotide reductase	NA|144aa|down_6|NZ_LN824141.1_1328167_1328599_+	NA	NA|181aa|down_7|NZ_LN824141.1_1328654_1329197_+	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family	NA|279aa|down_8|NZ_LN824141.1_1329207_1330044_+	COG2264, PrmA, Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]	NA|178aa|down_9|NZ_LN824141.1_1330010_1330544_+	pfam04417, DUF501, Protein of unknown function (DUF501)
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	16	1736260-1736390	15	CRISPRCasFinder	no	cas3	cas3HD,cas3,csa3,DEDDh,cas6	Unclear	AATTCAAAAACAGTAATTAATAATTACAACTTTTCGGTACTTGTACCA	48	0	0	NA	NA	NA	1	1	Unclear	cas3HD,cas3,csa3,DEDDh,cas6	NA,NA|127aa|down_2|NZ_LN824141.1_1741323_1741704_-,NA|166aa|down_3|NZ_LN824141.1_1741682_1742180_-,NA|102aa|down_4|NZ_LN824141.1_1742198_1742504_-	NA|332aa|up_9|NZ_LN824141.1_1726665_1727661_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|179aa|up_8|NZ_LN824141.1_1727921_1728458_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|133aa|up_7|NZ_LN824141.1_1728472_1728871_+	PRK03124, PRK03124, S-adenosylmethionine decarboxylase proenzyme; Provisional	NA|289aa|up_6|NZ_LN824141.1_1728870_1729737_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|339aa|up_5|NZ_LN824141.1_1729772_1730789_-	TIGR04070, photo_TT_lyase, spore photoproduct lyase	NA|278aa|up_4|NZ_LN824141.1_1730757_1731591_-	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|474aa|up_3|NZ_LN824141.1_1731603_1733025_-	TIGR02397, DNA_polymerase_III_subunit_gamma, DNA polymerase III, subunit gamma and tau	NA|289aa|up_2|NZ_LN824141.1_1733279_1734146_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|206aa|up_1|NZ_LN824141.1_1734173_1734791_-	pfam01205, UPF0029, Uncharacterized protein family UPF0029	NA|392aa|up_0|NZ_LN824141.1_1734893_1736069_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|452aa|down_0|NZ_LN824141.1_1736576_1737932_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	cas3|975aa|down_1|NZ_LN824141.1_1737947_1740872_-	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|127aa|down_2|NZ_LN824141.1_1741323_1741704_-	NA	NA|166aa|down_3|NZ_LN824141.1_1741682_1742180_-	NA	NA|102aa|down_4|NZ_LN824141.1_1742198_1742504_-	NA	NA|230aa|down_5|NZ_LN824141.1_1742524_1743214_-	TIGR02479, RNA_polymerase_sigma_factor_WhiG, RNA polymerase sigma factor, FliA/WhiG family	NA|162aa|down_6|NZ_LN824141.1_1743227_1743713_-	PRK13495, PRK13495, chemoreceptor glutamine deamidase CheD; Provisional	NA|208aa|down_7|NZ_LN824141.1_1743713_1744337_-	cd17909, CheC_ClassI, chemotaxis protein CheC, Class I	NA|235aa|down_8|NZ_LN824141.1_1744394_1745099_-	COG5581, COG5581, c-di-GMP-binding protein [Signal transduction mechanisms]	NA|286aa|down_9|NZ_LN824141.1_1745122_1745980_-	cd02038, FlhG-like, MinD-like ATPase FlhG
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	17	1824144-1824238	16	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	GTTTCCATTCCTCATAGGTAGGATAAGAAC	30	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|55aa|up_9|NZ_LN824141.1_1815755_1815920_+,NA|51aa|down_0|NZ_LN824141.1_1824322_1824475_+,NA|153aa|down_8|NZ_LN824141.1_1837624_1838083_-,NA|198aa|down_9|NZ_LN824141.1_1838155_1838749_-	NA|55aa|up_9|NZ_LN824141.1_1815755_1815920_+	NA	NA|350aa|up_8|NZ_LN824141.1_1816061_1817111_+	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|72aa|up_7|NZ_LN824141.1_1817129_1817345_+	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|328aa|up_6|NZ_LN824141.1_1818089_1819073_+	cd00140, beta_clamp, Beta clamp domain	NA|233aa|up_5|NZ_LN824141.1_1819192_1819891_-	pfam18643, RE_BsaWI, BsaWI restriction endonuclease type 2	NA|453aa|up_4|NZ_LN824141.1_1819896_1821255_-	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair]	NA|82aa|up_3|NZ_LN824141.1_1821391_1821637_-	pfam00216, Bac_DNA_binding, Bacterial DNA-binding protein	NA|470aa|up_2|NZ_LN824141.1_1821646_1823056_-	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD	NA|85aa|up_1|NZ_LN824141.1_1823065_1823320_-	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD	NA|189aa|up_0|NZ_LN824141.1_1823495_1824062_+	COG1195, RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]	NA|51aa|down_0|NZ_LN824141.1_1824322_1824475_+	NA	NA|560aa|down_1|NZ_LN824141.1_1824548_1826228_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|436aa|down_2|NZ_LN824141.1_1826214_1827522_+	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII	NA|458aa|down_3|NZ_LN824141.1_1827571_1828945_-	cd13140, MATE_like_1, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|961aa|down_4|NZ_LN824141.1_1829519_1832402_-	PRK00448, polC, DNA polymerase III PolC; Validated	NA|354aa|down_5|NZ_LN824141.1_1832745_1833807_+	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|777aa|down_6|NZ_LN824141.1_1833806_1836137_+	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|462aa|down_7|NZ_LN824141.1_1836180_1837566_+	PRK13238, tnaA, tryptophanase	NA|153aa|down_8|NZ_LN824141.1_1837624_1838083_-	NA	NA|198aa|down_9|NZ_LN824141.1_1838155_1838749_-	NA
GCF_000953715.1_DTL3	NZ_LN824141	Defluviitoga tunisiensis isolate L3 chromosome I	18	1839012-1839154	17	CRISPRCasFinder	no		cas3HD,cas3,csa3,DEDDh,cas6	Orphan	TTTATACTTTTTGGTACTTGTACTAAAGGAAGGGCTTCTCCCTGGTACCCTTTT	54	0	0	NA	NA	NA	1	1	Orphan	cas3HD,cas3,csa3,DEDDh,cas6	NA|51aa|up_9|NZ_LN824141.1_1824322_1824475_+,NA|153aa|up_1|NZ_LN824141.1_1837624_1838083_-,NA|198aa|up_0|NZ_LN824141.1_1838155_1838749_-,NA|175aa|down_8|NZ_LN824141.1_1848654_1849179_-,NA|416aa|down_9|NZ_LN824141.1_1849207_1850455_-	NA|51aa|up_9|NZ_LN824141.1_1824322_1824475_+	NA	NA|560aa|up_8|NZ_LN824141.1_1824548_1826228_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|436aa|up_7|NZ_LN824141.1_1826214_1827522_+	cd09992, HDAC_classII, Histone deacetylases and histone-like deacetylases, classII	NA|458aa|up_6|NZ_LN824141.1_1827571_1828945_-	cd13140, MATE_like_1, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|961aa|up_5|NZ_LN824141.1_1829519_1832402_-	PRK00448, polC, DNA polymerase III PolC; Validated	NA|354aa|up_4|NZ_LN824141.1_1832745_1833807_+	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|777aa|up_3|NZ_LN824141.1_1833806_1836137_+	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|462aa|up_2|NZ_LN824141.1_1836180_1837566_+	PRK13238, tnaA, tryptophanase	NA|153aa|up_1|NZ_LN824141.1_1837624_1838083_-	NA	NA|198aa|up_0|NZ_LN824141.1_1838155_1838749_-	NA	NA|325aa|down_0|NZ_LN824141.1_1839533_1840508_+	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|139aa|down_1|NZ_LN824141.1_1840841_1841258_+	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]	NA|268aa|down_2|NZ_LN824141.1_1841348_1842152_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|666aa|down_3|NZ_LN824141.1_1842192_1844190_+	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	NA|765aa|down_4|NZ_LN824141.1_1844207_1846502_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|197aa|down_5|NZ_LN824141.1_1846587_1847178_+	pfam16321, Ribosom_S30AE_C, Sigma 54 modulation/S30EA ribosomal protein C-terminus	NA|81aa|down_6|NZ_LN824141.1_1847224_1847467_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|280aa|down_7|NZ_LN824141.1_1847807_1848647_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|175aa|down_8|NZ_LN824141.1_1848654_1849179_-	NA	NA|416aa|down_9|NZ_LN824141.1_1849207_1850455_-	NA
