assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000940975.1_ASM94097v1	NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	1	3579570-3581733	1,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,cas3,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,TCACCGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,33,29	0	0	NA	NA	I-E:I-E:I-E:I-E	35,35,33,33	35	TypeI-E	DEDDh,cas3,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	NA,NA	NA|254aa|up_9|NZ_CP007222.1_3571436_3572198_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP007222.1_3572178_3573228_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP007222.1_3573224_3573704_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP007222.1_3573703_3574414_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP007222.1_3574432_3574744_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP007222.1_3574934_3575258_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP007222.1_3575308_3575914_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP007222.1_3575900_3577340_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP007222.1_3577349_3578258_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP007222.1_3578508_3579555_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP007222.1_3581817_3582111_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP007222.1_3582113_3583031_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|236aa|down_2|NZ_CP007222.1_3583027_3583735_-	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|242aa|down_3|NZ_CP007222.1_3583734_3584460_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NZ_CP007222.1_3584469_3585528_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|down_5|NZ_CP007222.1_3585550_3586153_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|down_6|NZ_CP007222.1_3586169_3587705_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP007222.1_3588266_3590966_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|down_8|NZ_CP007222.1_3591349_3592303_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|NZ_CP007222.1_3592390_3593125_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_000940975.1_ASM94097v1	NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	2	3598495-3599926	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,cas3,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	23,23,22	23	TypeI-E	DEDDh,cas3,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	NA,NA	cas7|353aa|up_9|NZ_CP007222.1_3584469_3585528_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|up_8|NZ_CP007222.1_3585550_3586153_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|up_7|NZ_CP007222.1_3586169_3587705_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_6|NZ_CP007222.1_3588266_3590966_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|up_5|NZ_CP007222.1_3591349_3592303_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_4|NZ_CP007222.1_3592390_3593125_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_CP007222.1_3593200_3594913_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP007222.1_3594912_3596712_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_CP007222.1_3597147_3597510_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|NZ_CP007222.1_3597599_3598397_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|NZ_CP007222.1_3600119_3600791_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NZ_CP007222.1_3600926_3602225_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NZ_CP007222.1_3602307_3603945_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|NZ_CP007222.1_3604172_3604973_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|99aa|down_4|NZ_CP007222.1_3605740_3606037_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|119aa|down_5|NZ_CP007222.1_3606002_3606359_-	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|745aa|down_6|NZ_CP007222.1_3606443_3608678_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|432aa|down_7|NZ_CP007222.1_3608729_3610025_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_8|NZ_CP007222.1_3610082_3612839_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|381aa|down_9|NZ_CP007222.1_3612882_3614025_-	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]
