assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	1	1135829-1136996	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Type III-A,Type III-B,Type III-C,Type III-D	GTTCACTGCCGAATAGGCAGCTTAGAAA,GTTCACTGCCGAATAGGCAGCTTAGAAA,GTTCACTGCCGAATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	19,19,10	19	TypeIII-A,TypeIII-B,TypeIII-C,TypeIII-D	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	PD-DExK|243aa|up_0|NZ_CP007142.1_1134604_1135333_+,NA|131aa|down_1|NZ_CP007142.1_1137699_1138092_+,NA|89aa|down_2|NZ_CP007142.1_1138397_1138664_+,NA|77aa|down_3|NZ_CP007142.1_1139042_1139273_+	NA|398aa|up_9|NZ_CP007142.1_1123762_1124956_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|245aa|up_8|NZ_CP007142.1_1125691_1126426_+	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	cas6f|189aa|up_7|NZ_CP007142.1_1127188_1127755_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	csm3gr7|397aa|up_6|NZ_CP007142.1_1127784_1128975_+	pfam03787, RAMPs, RAMP superfamily	cas10|625aa|up_5|NZ_CP007142.1_1128974_1130849_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|394aa|up_4|NZ_CP007142.1_1130845_1132027_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|303aa|up_3|NZ_CP007142.1_1132055_1132964_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|136aa|up_2|NZ_CP007142.1_1132956_1133364_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|404aa|up_1|NZ_CP007142.1_1133356_1134568_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	PD-DExK|243aa|up_0|NZ_CP007142.1_1134604_1135333_+	NA	NA|165aa|down_0|NZ_CP007142.1_1137122_1137617_+	pfam09832, DUF2059, Uncharacterized protein conserved in bacteria (DUF2059)	NA|131aa|down_1|NZ_CP007142.1_1137699_1138092_+	NA	NA|89aa|down_2|NZ_CP007142.1_1138397_1138664_+	NA	NA|77aa|down_3|NZ_CP007142.1_1139042_1139273_+	NA	NA|194aa|down_4|NZ_CP007142.1_1139471_1140053_+	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|427aa|down_5|NZ_CP007142.1_1140922_1142203_+	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like	NA|235aa|down_6|NZ_CP007142.1_1142407_1143112_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|212aa|down_7|NZ_CP007142.1_1143160_1143796_-	PRK09273, PRK09273, hypothetical protein; Provisional	NA|110aa|down_8|NZ_CP007142.1_1143829_1144159_-	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain	NA|383aa|down_9|NZ_CP007142.1_1144363_1145512_-	pfam14583, Pectate_lyase22, Oligogalacturonate lyase
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	2	1779974-1780051	2	CRISPRCasFinder	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TGCATTCCCGCCGTCCCTGGCGGTCA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|1004aa|up_9|NZ_CP007142.1_1766543_1769555_-	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|385aa|up_8|NZ_CP007142.1_1769697_1770852_-	cd01159, NcnH, Naphthocyclinone hydroxylase	NA|424aa|up_7|NZ_CP007142.1_1771020_1772292_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|423aa|up_6|NZ_CP007142.1_1772312_1773581_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|495aa|up_5|NZ_CP007142.1_1773763_1775248_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|288aa|up_4|NZ_CP007142.1_1775247_1776111_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|149aa|up_3|NZ_CP007142.1_1776111_1776558_-	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|209aa|up_2|NZ_CP007142.1_1776562_1777189_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|388aa|up_1|NZ_CP007142.1_1777472_1778636_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|360aa|up_0|NZ_CP007142.1_1778697_1779777_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|269aa|down_0|NZ_CP007142.1_1780250_1781057_+	pfam00520, Ion_trans, Ion transport protein	NA|247aa|down_1|NZ_CP007142.1_1781768_1782509_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|160aa|down_2|NZ_CP007142.1_1782607_1783087_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|366aa|down_3|NZ_CP007142.1_1783780_1784878_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|351aa|down_4|NZ_CP007142.1_1785076_1786129_+	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold	NA|414aa|down_5|NZ_CP007142.1_1786220_1787462_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]	NA|284aa|down_6|NZ_CP007142.1_1787472_1788324_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|258aa|down_7|NZ_CP007142.1_1788378_1789152_-	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin	NA|296aa|down_8|NZ_CP007142.1_1789259_1790147_+	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|397aa|down_9|NZ_CP007142.1_1790440_1791631_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	3	2058805-2058898	3	CRISPRCasFinder	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	AAAATAGGACACCCACAAACTTGAATT	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|115aa|up_9|NZ_CP007142.1_2050437_2050782_+,NA|188aa|up_8|NZ_CP007142.1_2050768_2051332_+,NA|77aa|up_7|NZ_CP007142.1_2051439_2051670_+,NA|169aa|up_6|NZ_CP007142.1_2052254_2052761_+,NA|114aa|up_5|NZ_CP007142.1_2053069_2053411_+,NA|180aa|up_3|NZ_CP007142.1_2056587_2057127_+,NA|120aa|up_2|NZ_CP007142.1_2057528_2057888_+,NA|171aa|up_1|NZ_CP007142.1_2057887_2058400_+,NA|83aa|up_0|NZ_CP007142.1_2058489_2058738_+,NA|332aa|down_0|NZ_CP007142.1_2059012_2060008_+,NA|131aa|down_1|NZ_CP007142.1_2060293_2060686_+,NA|109aa|down_4|NZ_CP007142.1_2062724_2063051_+	NA|115aa|up_9|NZ_CP007142.1_2050437_2050782_+	NA	NA|188aa|up_8|NZ_CP007142.1_2050768_2051332_+	NA	NA|77aa|up_7|NZ_CP007142.1_2051439_2051670_+	NA	NA|169aa|up_6|NZ_CP007142.1_2052254_2052761_+	NA	NA|114aa|up_5|NZ_CP007142.1_2053069_2053411_+	NA	NA|911aa|up_4|NZ_CP007142.1_2053855_2056588_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|180aa|up_3|NZ_CP007142.1_2056587_2057127_+	NA	NA|120aa|up_2|NZ_CP007142.1_2057528_2057888_+	NA	NA|171aa|up_1|NZ_CP007142.1_2057887_2058400_+	NA	NA|83aa|up_0|NZ_CP007142.1_2058489_2058738_+	NA	NA|332aa|down_0|NZ_CP007142.1_2059012_2060008_+	NA	NA|131aa|down_1|NZ_CP007142.1_2060293_2060686_+	NA	NA|385aa|down_2|NZ_CP007142.1_2060944_2062099_+	cd04280, ZnMc_astacin_like, Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of zinc-dependent proteolytic enzymes with a HExxH zinc-binding site/active site	NA|145aa|down_3|NZ_CP007142.1_2062119_2062554_+	pfam09619, YscW, Type III secretion system lipoprotein chaperone (YscW)	NA|109aa|down_4|NZ_CP007142.1_2062724_2063051_+	NA	NA|631aa|down_5|NZ_CP007142.1_2063144_2065037_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|363aa|down_6|NZ_CP007142.1_2065442_2066531_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|366aa|down_7|NZ_CP007142.1_2066533_2067631_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|290aa|down_8|NZ_CP007142.1_2067627_2068497_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|267aa|down_9|NZ_CP007142.1_2068587_2069388_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	4	3576943-3577052	4	CRISPRCasFinder	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CCGCCGTTCAGGGGACACCCACTGCAATTTCAGATACT	38	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|81aa|up_8|NZ_CP007142.1_3551548_3551791_+,NA|98aa|down_3|NZ_CP007142.1_3589575_3589869_+,NA|85aa|down_6|NZ_CP007142.1_3592763_3593018_+,NA|241aa|down_7|NZ_CP007142.1_3593088_3593811_+,NA|90aa|down_8|NZ_CP007142.1_3593783_3594053_+,NA|418aa|down_9|NZ_CP007142.1_3594512_3595766_+	NA|372aa|up_9|NZ_CP007142.1_3549429_3550545_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|81aa|up_8|NZ_CP007142.1_3551548_3551791_+	NA	NA|429aa|up_7|NZ_CP007142.1_3551832_3553119_+	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|210aa|up_6|NZ_CP007142.1_3553111_3553741_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|476aa|up_5|NZ_CP007142.1_3553981_3555409_-	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional	NA|72aa|up_4|NZ_CP007142.1_3555418_3555634_-	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|336aa|up_3|NZ_CP007142.1_3555861_3556869_+	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family	NA|669aa|up_2|NZ_CP007142.1_3556855_3558862_+	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	NA|1658aa|up_1|NZ_CP007142.1_3558861_3563835_+	PRK12467, PRK12467, peptide synthase; Provisional	NA|3178aa|up_0|NZ_CP007142.1_3563831_3573365_+	PRK12316, PRK12316, peptide synthase; Provisional	NA|1343aa|down_0|NZ_CP007142.1_3582907_3586936_+	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|560aa|down_1|NZ_CP007142.1_3586932_3588612_+	PRK10522, PRK10522, multidrug transporter membrane component/ATP-binding component; Provisional	NA|173aa|down_2|NZ_CP007142.1_3588904_3589423_+	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|98aa|down_3|NZ_CP007142.1_3589575_3589869_+	NA	NA|292aa|down_4|NZ_CP007142.1_3590081_3590957_-	smart00748, HEPN, Higher Eukarytoes and Prokaryotes Nucleotide-binding domain	NA|368aa|down_5|NZ_CP007142.1_3591586_3592690_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|85aa|down_6|NZ_CP007142.1_3592763_3593018_+	NA	NA|241aa|down_7|NZ_CP007142.1_3593088_3593811_+	NA	NA|90aa|down_8|NZ_CP007142.1_3593783_3594053_+	NA	NA|418aa|down_9|NZ_CP007142.1_3594512_3595766_+	NA
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	5	3734353-3735581	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	csa3	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Type I-A	GTTCACTGCCGCACAGGCAGCTTAGAAA,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	20,20,20	20	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|89aa|up_2|NZ_CP007142.1_3732692_3732959_-,NA	NA|717aa|up_9|NZ_CP007142.1_3721158_3723309_-	PRK06370, PRK06370, FAD-containing oxidoreductase	NA|242aa|up_8|NZ_CP007142.1_3723699_3724425_+	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|255aa|up_7|NZ_CP007142.1_3724424_3725189_+	TIGR03729, acc_ester, putative phosphoesterase	NA|636aa|up_6|NZ_CP007142.1_3725758_3727666_-	PRK08294, PRK08294, phenol 2-monooxygenase; Provisional	NA|486aa|up_5|NZ_CP007142.1_3727676_3729134_-	pfam03055, RPE65, Retinal pigment epithelial membrane protein	NA|327aa|up_4|NZ_CP007142.1_3729301_3730282_+	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional	NA|114aa|up_3|NZ_CP007142.1_3730583_3730925_-	pfam13551, HTH_29, Winged helix-turn helix	NA|89aa|up_2|NZ_CP007142.1_3732692_3732959_-	NA	NA|135aa|up_1|NZ_CP007142.1_3732958_3733363_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|122aa|up_0|NZ_CP007142.1_3733386_3733752_-	pfam05957, DUF883, Bacterial protein of unknown function (DUF883)	NA|408aa|down_0|NZ_CP007142.1_3736030_3737254_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|156aa|down_1|NZ_CP007142.1_3737477_3737945_-	cd08895, SRPBCC_CalC_Aha1-like_2, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|123aa|down_2|NZ_CP007142.1_3737984_3738353_-	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|267aa|down_3|NZ_CP007142.1_3738379_3739180_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|126aa|down_4|NZ_CP007142.1_3739211_3739589_-	pfam07237, DUF1428, Protein of unknown function (DUF1428)	NA|432aa|down_5|NZ_CP007142.1_3739672_3740968_-	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription]	csa3|253aa|down_6|NZ_CP007142.1_3741156_3741915_+	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family	NA|156aa|down_7|NZ_CP007142.1_3741911_3742379_+	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family	NA|243aa|down_8|NZ_CP007142.1_3742375_3743104_+	TIGR02690, arsenical_resistance_protein_ArsH_putative, arsenical resistance protein ArsH	NA|339aa|down_9|NZ_CP007142.1_3743107_3744124_+	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	6	4002830-4002917	6	CRISPRCasFinder	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	AATATAACAGGACACCCACTTTAAAATA	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|135aa|up_6|NZ_CP007142.1_3994819_3995224_-,NA|142aa|up_5|NZ_CP007142.1_3995992_3996418_-,NA|96aa|up_3|NZ_CP007142.1_3997349_3997637_-,NA|321aa|down_0|NZ_CP007142.1_4003150_4004113_-,NA|124aa|down_1|NZ_CP007142.1_4004274_4004646_-,NA|161aa|down_2|NZ_CP007142.1_4004961_4005444_-,NA|338aa|down_4|NZ_CP007142.1_4007303_4008317_-,NA|116aa|down_5|NZ_CP007142.1_4008410_4008758_-,NA|115aa|down_6|NZ_CP007142.1_4008877_4009222_-,NA|117aa|down_7|NZ_CP007142.1_4009309_4009660_-,NA|93aa|down_8|NZ_CP007142.1_4009754_4010033_-	NA|280aa|up_9|NZ_CP007142.1_3992746_3993586_-	PRK09236, PRK09236, dihydroorotase; Reviewed	NA|158aa|up_8|NZ_CP007142.1_3993621_3994095_-	cd02749, Macro_SF, macrodomain superfamily	NA|170aa|up_7|NZ_CP007142.1_3994219_3994729_-	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|135aa|up_6|NZ_CP007142.1_3994819_3995224_-	NA	NA|142aa|up_5|NZ_CP007142.1_3995992_3996418_-	NA	NA|140aa|up_4|NZ_CP007142.1_3996813_3997233_-	pfam04828, GFA, Glutathione-dependent formaldehyde-activating enzyme	NA|96aa|up_3|NZ_CP007142.1_3997349_3997637_-	NA	NA|304aa|up_2|NZ_CP007142.1_3998224_3999136_-	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|291aa|up_1|NZ_CP007142.1_3999240_4000113_+	PRK10376, PRK10376, putative oxidoreductase; Provisional	NA|441aa|up_0|NZ_CP007142.1_4001196_4002519_-	PRK05318, PRK05318, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|321aa|down_0|NZ_CP007142.1_4003150_4004113_-	NA	NA|124aa|down_1|NZ_CP007142.1_4004274_4004646_-	NA	NA|161aa|down_2|NZ_CP007142.1_4004961_4005444_-	NA	NA|100aa|down_3|NZ_CP007142.1_4005448_4005748_-	pfam15656, Tox-HDC, Toxin with a H, D/N and C signature	NA|338aa|down_4|NZ_CP007142.1_4007303_4008317_-	NA	NA|116aa|down_5|NZ_CP007142.1_4008410_4008758_-	NA	NA|115aa|down_6|NZ_CP007142.1_4008877_4009222_-	NA	NA|117aa|down_7|NZ_CP007142.1_4009309_4009660_-	NA	NA|93aa|down_8|NZ_CP007142.1_4009754_4010033_-	NA	NA|307aa|down_9|NZ_CP007142.1_4010102_4011023_-	pfam18742, DpnII-MboI, REase_DpnII-MboI
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	7	4644225-4645752	7,3,3	CRISPRCasFinder,CRT,PILER-CR	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	25,25,24	25	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|90aa|up_3|NZ_CP007142.1_4640060_4640330_-,NA|98aa|up_0|NZ_CP007142.1_4643716_4644010_+,NA|63aa|down_5|NZ_CP007142.1_4652074_4652263_-,NA|116aa|down_9|NZ_CP007142.1_4662441_4662789_+	NA|346aa|up_9|NZ_CP007142.1_4631587_4632625_-	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|548aa|up_8|NZ_CP007142.1_4632617_4634261_-	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|133aa|up_7|NZ_CP007142.1_4634528_4634927_-	PRK00253, fliE, flagellar hook-basal body protein FliE; Reviewed	NA|465aa|up_6|NZ_CP007142.1_4635404_4636799_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|418aa|up_5|NZ_CP007142.1_4636803_4638057_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|496aa|up_4|NZ_CP007142.1_4638253_4639741_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|90aa|up_3|NZ_CP007142.1_4640060_4640330_-	NA	NA|134aa|up_2|NZ_CP007142.1_4640348_4640750_-	PRK05685, fliS, flagellar export chaperone FliS	NA|695aa|up_1|NZ_CP007142.1_4641121_4643206_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|98aa|up_0|NZ_CP007142.1_4643716_4644010_+	NA	NA|319aa|down_0|NZ_CP007142.1_4646287_4647244_-	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only]	NA|351aa|down_1|NZ_CP007142.1_4647358_4648411_-	cd06288, PBP1_sucrose_transcription_regulator, ligand-binding domain of DNA-binding regulatory proteins specific to sucrose that are members of the LacI-GalR family of bacterial transcription repressors	NA|437aa|down_2|NZ_CP007142.1_4648463_4649774_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|266aa|down_3|NZ_CP007142.1_4649888_4650686_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|294aa|down_4|NZ_CP007142.1_4650793_4651675_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|63aa|down_5|NZ_CP007142.1_4652074_4652263_-	NA	NA|1306aa|down_6|NZ_CP007142.1_4654439_4658357_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|130aa|down_7|NZ_CP007142.1_4658590_4658980_-	pfam03646, FlaG, FlaG protein	NA|1034aa|down_8|NZ_CP007142.1_4659058_4662160_-	PRK08869, PRK08869, polar flagellin E	NA|116aa|down_9|NZ_CP007142.1_4662441_4662789_+	NA
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	8	5365719-5368029	4,8,4	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	GTTCACTGCCGCACAGGCAGCTTAGAAA,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	38,38,38	38	TypeI-F	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|199aa|up_4|NZ_CP007142.1_5350828_5351425_+,NA|98aa|up_0|NZ_CP007142.1_5365200_5365494_+,NA|73aa|down_4|NZ_CP007142.1_5372198_5372417_-,NA|525aa|down_9|NZ_CP007142.1_5378852_5380427_+	NA|354aa|up_9|NZ_CP007142.1_5346554_5347616_+	cd19994, PBP1_ChvE, periplasmic sugar binding protein ChvE that interacts with a bacterial two-component signaling system	NA|187aa|up_8|NZ_CP007142.1_5347996_5348557_+	pfam14279, HNH_5, HNH endonuclease	NA|153aa|up_7|NZ_CP007142.1_5348707_5349166_+	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|97aa|up_6|NZ_CP007142.1_5349425_5349716_+	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily	NA|212aa|up_5|NZ_CP007142.1_5349721_5350357_-	cd03206, GST_C_7, C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases	NA|199aa|up_4|NZ_CP007142.1_5350828_5351425_+	NA	NA|737aa|up_3|NZ_CP007142.1_5351548_5353759_-	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in  bacterial endospore germination	NA|774aa|up_2|NZ_CP007142.1_5354477_5356799_-	COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane]	NA|2514aa|up_1|NZ_CP007142.1_5356798_5364340_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|98aa|up_0|NZ_CP007142.1_5365200_5365494_+	NA	cas6f|187aa|down_0|NZ_CP007142.1_5368343_5368904_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|343aa|down_1|NZ_CP007142.1_5368912_5369941_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|311aa|down_2|NZ_CP007142.1_5369957_5370890_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|429aa|down_3|NZ_CP007142.1_5370886_5372173_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	NA|73aa|down_4|NZ_CP007142.1_5372198_5372417_-	NA	NA|140aa|down_5|NZ_CP007142.1_5372409_5372829_-	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins	NA|76aa|down_6|NZ_CP007142.1_5372825_5373053_-	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	cas3f|1103aa|down_7|NZ_CP007142.1_5373130_5376439_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|320aa|down_8|NZ_CP007142.1_5376435_5377395_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|525aa|down_9|NZ_CP007142.1_5378852_5380427_+	NA
GCF_000940805.1_ASM94080v1	NZ_CP007142	Gynuella sunshinyii YC6258 chromosome, complete genome	9	5960609-5960691	9	CRISPRCasFinder	no		WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TCGCAGTGCTGTAACTGCGCCTG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas6f,csm3gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,PD-DExK,DinG,csx1,DEDDh,cas7f,cas5f,cas8f,cas3f,cas1	NA|183aa|up_7|NZ_CP007142.1_5951361_5951910_-,NA|159aa|up_2|NZ_CP007142.1_5958975_5959452_-,NA|90aa|down_7|NZ_CP007142.1_5972960_5973230_-,NA|173aa|down_8|NZ_CP007142.1_5973703_5974222_+,NA|238aa|down_9|NZ_CP007142.1_5974319_5975033_+	NA|317aa|up_9|NZ_CP007142.1_5949344_5950295_-	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|342aa|up_8|NZ_CP007142.1_5950320_5951346_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|183aa|up_7|NZ_CP007142.1_5951361_5951910_-	NA	NA|371aa|up_6|NZ_CP007142.1_5951967_5953080_-	TIGR03363, VI_chp_8, type VI secretion-associated protein, ImpA family	NA|1274aa|up_5|NZ_CP007142.1_5953089_5956911_-	pfam14331, ImcF-related_N, ImcF-related N-terminal domain	NA|239aa|up_4|NZ_CP007142.1_5956913_5957630_-	pfam09850, DotU, Type VI secretion system protein DotU	NA|450aa|up_3|NZ_CP007142.1_5957629_5958979_-	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family	NA|159aa|up_2|NZ_CP007142.1_5958975_5959452_-	NA	NA|131aa|up_1|NZ_CP007142.1_5959456_5959849_-	pfam13665, DUF4150, Domain of unknown function (DUF4150)	NA|182aa|up_0|NZ_CP007142.1_5959852_5960398_-	pfam12059, DUF3540, Protein of unknown function (DUF3540)	NA|852aa|down_0|NZ_CP007142.1_5961461_5964017_-	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169)	NA|926aa|down_1|NZ_CP007142.1_5964018_5966796_-	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|338aa|down_2|NZ_CP007142.1_5966713_5967727_-	pfam06996, T6SS_TssG, Type VI secretion, TssG	NA|595aa|down_3|NZ_CP007142.1_5967714_5969499_-	pfam05947, T6SS_TssF, Type VI secretion system, TssF	NA|111aa|down_4|NZ_CP007142.1_5969572_5969905_-	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein	NA|189aa|down_5|NZ_CP007142.1_5969909_5970476_-	pfam05638, T6SS_HCP, Type VI secretion system effector, Hcp	NA|497aa|down_6|NZ_CP007142.1_5970494_5971985_-	pfam05943, VipB, Type VI secretion protein, EvpB/VC_A0108, tail sheath	NA|90aa|down_7|NZ_CP007142.1_5972960_5973230_-	NA	NA|173aa|down_8|NZ_CP007142.1_5973703_5974222_+	NA	NA|238aa|down_9|NZ_CP007142.1_5974319_5975033_+	NA
