assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000835085.1_ASM83508v1	NZ_CP006959	Mycoplasma capricolum subsp. capripneumoniae 87001, complete genome	1	249387-249495	1	CRISPRCasFinder	no		DEDDh	Orphan	AAGGAATTTCTGTGTATTTACACACTTTTTCCTTA	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|72aa|up_9|NZ_CP006959.1_220979_221195_+,NA|107aa|up_8|NZ_CP006959.1_221346_221667_+,NA|175aa|up_5|NZ_CP006959.1_232724_233249_+,NA|122aa|down_3|NZ_CP006959.1_254413_254779_-,NA|65aa|down_4|NZ_CP006959.1_254962_255157_-,NA|104aa|down_5|NZ_CP006959.1_256092_256404_-,NA|127aa|down_6|NZ_CP006959.1_257083_257464_+,NA|305aa|down_7|NZ_CP006959.1_257426_258341_-,NA|152aa|down_8|NZ_CP006959.1_258297_258753_-,NA|439aa|down_9|NZ_CP006959.1_258667_259984_-	NA|72aa|up_9|NZ_CP006959.1_220979_221195_+	NA	NA|107aa|up_8|NZ_CP006959.1_221346_221667_+	NA	NA|294aa|up_7|NZ_CP006959.1_223554_224436_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|547aa|up_6|NZ_CP006959.1_224469_226110_-	TIGR03490, Uncharacterized_lipoprotein_lpp, mycoides cluster lipoprotein, LppA/P72 family	NA|175aa|up_5|NZ_CP006959.1_232724_233249_+	NA	NA|535aa|up_4|NZ_CP006959.1_241741_243346_+	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|598aa|up_3|NZ_CP006959.1_244117_245911_-	TIGR00181, Oligoendopeptidase_F_homolog, oligoendopeptidase F	NA|228aa|up_2|NZ_CP006959.1_245910_246594_-	cd17495, RMtype1_S_Cep9333ORF4827P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Crinalium epipsammum S subunit (S	NA|452aa|up_1|NZ_CP006959.1_246610_247966_-	pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain	NA|434aa|up_0|NZ_CP006959.1_248081_249383_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|207aa|down_0|NZ_CP006959.1_249619_250240_+	COG2059, ChrA, Chromate transport protein ChrA [Inorganic ion transport and metabolism]	NA|226aa|down_1|NZ_CP006959.1_250239_250917_+	pfam02417, Chromate_transp, Chromate transporter	NA|306aa|down_2|NZ_CP006959.1_253282_254200_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|122aa|down_3|NZ_CP006959.1_254413_254779_-	NA	NA|65aa|down_4|NZ_CP006959.1_254962_255157_-	NA	NA|104aa|down_5|NZ_CP006959.1_256092_256404_-	NA	NA|127aa|down_6|NZ_CP006959.1_257083_257464_+	NA	NA|305aa|down_7|NZ_CP006959.1_257426_258341_-	NA	NA|152aa|down_8|NZ_CP006959.1_258297_258753_-	NA	NA|439aa|down_9|NZ_CP006959.1_258667_259984_-	NA
GCF_000835085.1_ASM83508v1	NZ_CP006959	Mycoplasma capricolum subsp. capripneumoniae 87001, complete genome	2	358513-358699	1	PILER-CR	no		DEDDh	Orphan	ACCAACCCATTGGTAACTGAGATACTTCAAATGTAACTGATATGCGTTGTAT	52	1	1	358565-358587	NZ_CP006959.1_436869-436891	NA	2	2	Orphan	DEDDh	NA|46aa|up_7|NZ_CP006959.1_352304_352442_+,NA|216aa|up_6|NZ_CP006959.1_352459_353107_+,NA|202aa|up_4|NZ_CP006959.1_353594_354200_+,NA|71aa|up_2|NZ_CP006959.1_355946_356159_+,NA|64aa|up_1|NZ_CP006959.1_357689_357881_+,NA|94aa|up_0|NZ_CP006959.1_357970_358252_+,NA|62aa|down_1|NZ_CP006959.1_359978_360164_+,NA|138aa|down_2|NZ_CP006959.1_361891_362305_+,NA|126aa|down_6|NZ_CP006959.1_366988_367366_+,NA|182aa|down_7|NZ_CP006959.1_367445_367991_+,NA|187aa|down_9|NZ_CP006959.1_369017_369578_+	NA|372aa|up_9|NZ_CP006959.1_347919_349035_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|151aa|up_8|NZ_CP006959.1_351803_352256_+	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|46aa|up_7|NZ_CP006959.1_352304_352442_+	NA	NA|216aa|up_6|NZ_CP006959.1_352459_353107_+	NA	NA|128aa|up_5|NZ_CP006959.1_353132_353516_+	pfam01719, Rep_2, Plasmid replication protein	NA|202aa|up_4|NZ_CP006959.1_353594_354200_+	NA	NA|246aa|up_3|NZ_CP006959.1_355209_355947_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|71aa|up_2|NZ_CP006959.1_355946_356159_+	NA	NA|64aa|up_1|NZ_CP006959.1_357689_357881_+	NA	NA|94aa|up_0|NZ_CP006959.1_357970_358252_+	NA	NA|207aa|down_0|NZ_CP006959.1_359291_359912_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|62aa|down_1|NZ_CP006959.1_359978_360164_+	NA	NA|138aa|down_2|NZ_CP006959.1_361891_362305_+	NA	NA|272aa|down_3|NZ_CP006959.1_363475_364291_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|223aa|down_4|NZ_CP006959.1_365148_365817_+	pfam02086, MethyltransfD12, D12 class N6 adenine-specific DNA methyltransferase	NA|157aa|down_5|NZ_CP006959.1_366306_366777_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|126aa|down_6|NZ_CP006959.1_366988_367366_+	NA	NA|182aa|down_7|NZ_CP006959.1_367445_367991_+	NA	NA|75aa|down_8|NZ_CP006959.1_368730_368955_+	cd14214, PKc_CLK3, Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 3	NA|187aa|down_9|NZ_CP006959.1_369017_369578_+	NA
GCF_000835085.1_ASM83508v1	NZ_CP006959	Mycoplasma capricolum subsp. capripneumoniae 87001, complete genome	3	747759-747899	2	CRISPRCasFinder	no		DEDDh	Orphan	GGTTATGGTAGATTAGTGGTAGAAATATGGTAGATTAGAATATAAA	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|478aa|up_5|NZ_CP006959.1_737777_739211_-,NA|71aa|up_4|NZ_CP006959.1_739413_739626_-,NA|365aa|up_1|NZ_CP006959.1_741733_742828_-,NA|318aa|down_2|NZ_CP006959.1_753583_754537_+	NA|426aa|up_9|NZ_CP006959.1_729329_730607_-	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|282aa|up_8|NZ_CP006959.1_733064_733910_-	cd00947, TBP_aldolase_IIB, Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases	NA|245aa|up_7|NZ_CP006959.1_734113_734848_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|314aa|up_6|NZ_CP006959.1_736756_737698_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|478aa|up_5|NZ_CP006959.1_737777_739211_-	NA	NA|71aa|up_4|NZ_CP006959.1_739413_739626_-	NA	NA|316aa|up_3|NZ_CP006959.1_740276_741224_-	COG0507, RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair]	NA|178aa|up_2|NZ_CP006959.1_741189_741723_-	cd17934, DEXXQc_Upf1-like, DEXXQ-box helicase domain of Upf1-like helicase	NA|365aa|up_1|NZ_CP006959.1_741733_742828_-	NA	NA|471aa|up_0|NZ_CP006959.1_746282_747695_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|460aa|down_0|NZ_CP006959.1_749956_751336_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|614aa|down_1|NZ_CP006959.1_751670_753512_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|318aa|down_2|NZ_CP006959.1_753583_754537_+	NA	NA|405aa|down_3|NZ_CP006959.1_762516_763731_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|339aa|down_4|NZ_CP006959.1_763859_764876_-	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|312aa|down_5|NZ_CP006959.1_764968_765904_-	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|395aa|down_6|NZ_CP006959.1_765913_767098_-	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]	NA|275aa|down_7|NZ_CP006959.1_767255_768080_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|912aa|down_8|NZ_CP006959.1_768090_770826_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|987aa|down_9|NZ_CP006959.1_770834_773795_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
GCF_000835085.1_ASM83508v1	NZ_CP006959	Mycoplasma capricolum subsp. capripneumoniae 87001, complete genome	4	888503-888601	3	CRISPRCasFinder	no		DEDDh	Orphan	TTGAAACATCTCAAGATGATAAAT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|200aa|up_6|NZ_CP006959.1_876757_877357_+,NA|95aa|up_1|NZ_CP006959.1_882307_882592_-,NA	NA|249aa|up_9|NZ_CP006959.1_873485_874232_+	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|283aa|up_8|NZ_CP006959.1_874224_875073_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|532aa|up_7|NZ_CP006959.1_875063_876659_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|200aa|up_6|NZ_CP006959.1_876757_877357_+	NA	NA|334aa|up_5|NZ_CP006959.1_877358_878360_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|223aa|up_4|NZ_CP006959.1_878424_879093_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|561aa|up_3|NZ_CP006959.1_879104_880787_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|438aa|up_2|NZ_CP006959.1_880951_882265_+	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase	NA|95aa|up_1|NZ_CP006959.1_882307_882592_-	NA	NA|221aa|up_0|NZ_CP006959.1_886531_887194_+	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|184aa|down_0|NZ_CP006959.1_891260_891812_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|436aa|down_1|NZ_CP006959.1_891834_893142_-	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1	NA|433aa|down_2|NZ_CP006959.1_893125_894424_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|267aa|down_3|NZ_CP006959.1_894708_895509_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|217aa|down_4|NZ_CP006959.1_895983_896634_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|151aa|down_5|NZ_CP006959.1_896880_897333_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|490aa|down_6|NZ_CP006959.1_897421_898891_-	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family	NA|320aa|down_7|NZ_CP006959.1_898893_899853_-	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair]	NA|672aa|down_8|NZ_CP006959.1_900112_902128_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|947aa|down_9|NZ_CP006959.1_902136_904977_+	PRK00349, uvrA, excinuclease ABC subunit UvrA
GCF_000835085.1_ASM83508v1	NZ_CP006959	Mycoplasma capricolum subsp. capripneumoniae 87001, complete genome	5	980307-980408	4	CRISPRCasFinder	no		DEDDh	Orphan	AATCAAAATATAAATAATTCAAAT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|100aa|up_0|NZ_CP006959.1_979683_979983_-,NA|61aa|down_0|NZ_CP006959.1_982191_982374_+,NA|327aa|down_7|NZ_CP006959.1_990035_991016_-,NA|192aa|down_9|NZ_CP006959.1_995474_996050_+	NA|243aa|up_9|NZ_CP006959.1_965018_965747_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|281aa|up_8|NZ_CP006959.1_972660_973503_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|103aa|up_7|NZ_CP006959.1_973514_973823_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|501aa|up_6|NZ_CP006959.1_973935_975438_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|325aa|up_5|NZ_CP006959.1_975440_976415_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|105aa|up_4|NZ_CP006959.1_976416_976731_-	pfam08921, DUF1904, Domain of unknown function (DUF1904)	NA|423aa|up_3|NZ_CP006959.1_976836_978105_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|276aa|up_2|NZ_CP006959.1_978185_979013_-	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|195aa|up_1|NZ_CP006959.1_979080_979665_-	TIGR04522, EcfS_MSC_0063, putative energy coupling factor transporter S component, MSC_0063 family	NA|100aa|up_0|NZ_CP006959.1_979683_979983_-	NA	NA|61aa|down_0|NZ_CP006959.1_982191_982374_+	NA	NA|581aa|down_1|NZ_CP006959.1_982417_984160_-	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|150aa|down_2|NZ_CP006959.1_984268_984718_+	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|697aa|down_3|NZ_CP006959.1_984866_986957_+	pfam01732, DUF31, Putative peptidase (DUF31)	NA|302aa|down_4|NZ_CP006959.1_987693_988599_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|150aa|down_5|NZ_CP006959.1_988652_989102_+	pfam13518, HTH_28, Helix-turn-helix domain	NA|218aa|down_6|NZ_CP006959.1_989149_989803_-	cd09006, PNP_EcPNPI-like, purine nucleoside phosphorylases similar to Escherichia coli PNP-I (DeoD) and Trichomonas vaginalis PNP	NA|327aa|down_7|NZ_CP006959.1_990035_991016_-	NA	NA|312aa|down_8|NZ_CP006959.1_991859_992795_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|192aa|down_9|NZ_CP006959.1_995474_996050_+	NA
