The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	126635	166966	4685423	coat,protease,transposase	Escherichia_phage(14.29%)	34	NA	NA
WP_042593801.1|126635_127658_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	1.6e-200
WP_002213775.1|127966_128425_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002216059.1|128587_129622_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_002210291.1|129988_130432_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002210293.1|130600_130855_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002209743.1|130876_132085_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002210828.1|132132_132483_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002210829.1|132818_133655_+	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA	NA
WP_002210830.1|133746_134508_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.9	3.1e-20
WP_002210831.1|134843_136511_+	pectate disaccharide-lyase	NA	NA	NA	NA	NA
WP_002210832.1|136551_137442_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002210833.1|137434_138355_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002210834.1|138368_139496_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	26.5	1.6e-12
WP_002210835.1|139511_140804_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002210836.1|141101_141812_+	porin	NA	NA	NA	NA	NA
WP_002210837.1|142291_142840_+	metal-dependent hydrolase	NA	A0A127AVX7	Bacillus_phage	32.9	4.0e-09
WP_002210838.1|143043_144435_+	L-cystine transporter	NA	NA	NA	NA	NA
WP_002210839.1|144649_145501_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	28.8	1.3e-11
WP_002210840.1|145885_146677_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA	NA
WP_002210841.1|146863_148030_-	oligogalacturonate lyase	NA	NA	NA	NA	NA
WP_002210842.1|148356_149724_+	MFS transporter	NA	NA	NA	NA	NA
WP_002210843.1|149777_150581_-	molecular chaperone	NA	NA	NA	NA	NA
WP_002215120.1|150577_151741_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002210844.1|151737_154350_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002215118.1|154431_155211_-	fimbrial chaperone	NA	NA	NA	NA	NA
WP_002210846.1|155363_155906_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002210847.1|156563_157445_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_002210848.1|157899_159972_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	34.8	4.0e-86
WP_002210849.1|159991_160705_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_002210850.1|160800_161298_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002367629.1|161529_162777_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_002216616.1|162745_165397_+	PqiB family protein	NA	NA	NA	NA	NA
WP_002210852.1|165875_166430_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216613.1|166435_166966_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 2
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	258365	322023	4685423	transposase	uncultured_virus(33.33%)	54	NA	NA
WP_000255944.1|258365_259388_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|259387_260167_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_042593804.1|260550_261759_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.7e-50
WP_002213101.1|261854_262268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215856.1|262275_262845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213097.1|263382_264687_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002213095.1|265061_265604_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002215854.1|265731_266751_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_002213090.1|266833_267700_-	thiamine kinase	NA	NA	NA	NA	NA
WP_002213089.1|267680_268256_-	penicillin-binding protein activator LpoB	NA	NA	NA	NA	NA
WP_002213088.1|268296_268686_-	YcfL family protein	NA	NA	NA	NA	NA
WP_002213087.1|268720_269074_-	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
WP_002215853.1|269247_270066_-	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002213085.1|271153_272587_-	PTS glucose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_002213084.1|272892_273702_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_002213083.1|273716_274739_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_002213082.1|274738_275377_-	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	36.1	4.6e-25
WP_002217396.1|275366_276392_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_002213080.1|276680_277487_-	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_002213775.1|277902_278361_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002213079.1|278560_279802_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_002220787.1|279896_280133_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.6	7.7e-10
WP_002210935.1|280286_281021_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.1	7.7e-16
WP_002210934.1|281034_281964_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_002210933.1|282001_282952_-	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_002210932.1|282958_283993_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_002210931.1|284026_284194_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002210930.1|284206_284731_-	23S rRNA accumulation protein YceD	NA	NA	NA	NA	NA
WP_002210928.1|284872_285469_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_002213759.1|285623_286082_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210927.1|286301_287264_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA	NA
WP_002354074.1|287847_291504_+	ribonuclease E	NA	NA	NA	NA	NA
WP_002209743.1|291599_292808_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002216388.1|292770_295923_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_002211911.1|296947_298252_+	MFS transporter	NA	NA	NA	NA	NA
WP_002211912.1|298260_298683_-	thiol-disulfide oxidoreductase DCC family protein	NA	NA	NA	NA	NA
WP_002216393.1|299110_299851_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002211916.1|299898_300741_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_002211917.1|300772_302050_+	L-fuconate dehydratase	NA	NA	NA	NA	NA
WP_002211919.1|302346_303492_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA	NA
WP_002211920.1|303696_305064_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	93.7	7.0e-63
WP_002224723.1|305357_306788_+	EmmdR/YeeO family multidrug/toxin efflux MATE transporter	NA	NA	NA	NA	NA
WP_002211922.1|306815_308156_-	MFS transporter	NA	NA	NA	NA	NA
WP_002211923.1|308191_309073_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_002217591.1|309649_310345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211926.1|310434_310974_+	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
WP_002213125.1|311840_312470_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002213124.1|312727_314020_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_002213122.1|314039_314546_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_002213121.1|314669_315662_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002213120.1|316184_316925_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_002213113.1|317311_319438_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_042468818.1|319515_320793_-	MFS transporter	NA	NA	NA	NA	NA
WP_042593807.1|320817_322023_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	1.3e-49
>prophage 3
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	373042	417807	4685423	lysis,plate,tRNA,transposase	Escherichia_phage(22.22%)	37	NA	NA
WP_002211870.1|373042_375070_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.1	8.0e-55
WP_002213775.1|375233_375692_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_000255944.1|375802_376825_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|376824_377604_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002228565.1|377868_378531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211975.1|379228_380305_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002211974.1|380322_381576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211973.1|381908_383090_+	MFS transporter	NA	NA	NA	NA	NA
WP_002211971.1|383331_383739_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_002211970.1|383735_384431_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_002211969.1|384756_385641_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_002211968.1|385996_387694_+	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_002211966.1|387974_388712_+	outer membrane permeability protein SanA	NA	NA	NA	NA	NA
WP_002211965.1|389156_390167_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA	NA
WP_002211964.1|390187_391708_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.9	2.6e-10
WP_002215885.1|391937_392945_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA	NA
WP_002211961.1|393692_394859_-	DUF418 family protein	NA	NA	NA	NA	NA
WP_002211960.1|394913_395576_-	GTP cyclohydrolase I FolE	NA	R9TJA5	Vibrio_phage	53.5	5.8e-55
WP_002211959.1|395759_396911_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA	NA
WP_002211958.1|397046_397916_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211957.1|398189_399329_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.9	5.2e-35
WP_002211956.1|399349_400192_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_002227980.1|400448_400661_+	peptide antibiotic darobactin C	NA	NA	NA	NA	NA
WP_002215886.1|400744_403105_+	darobactin export ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002211952.1|403106_404369_+	darobactin export ABC transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002211951.1|404370_405039_+	darobactin export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	1.4e-35
WP_002211950.1|405048_406359_+	darobactin maturation radical SAM/SPASM protein DarE	NA	NA	NA	NA	NA
WP_002211949.1|406893_408168_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_002211948.1|408169_408940_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_042593809.1|409075_410284_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	3.2e-51
WP_002211947.1|410327_410981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002227996.1|411208_412804_-	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	28.5	6.1e-58
WP_002211945.1|413486_414110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211944.1|414321_415689_-	membrane protein	NA	NA	NA	NA	NA
WP_002211943.1|415713_416166_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002214552.1|416165_416747_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211941.1|416721_417807_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 4
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	683603	701968	4685423	plate,tail,coat,transposase	Vibrio_phage(25.0%)	19	NA	NA
WP_002213775.1|683603_684062_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002208835.1|684262_685267_-	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	47.7	3.1e-84
WP_002208836.1|685444_685672_+	YejL family protein	NA	NA	NA	NA	NA
WP_002208837.1|685699_687496_+	DUF3413 domain-containing protein	NA	NA	NA	NA	NA
WP_002230704.1|687726_688110_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	66.7	7.8e-36
WP_002208839.1|688466_689615_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_002208840.1|689627_690116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208841.1|690815_691178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208842.1|691303_692740_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_002208843.1|693030_693771_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002208845.1|694068_694848_-|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
WP_002208846.1|694944_695292_-	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	41.3	6.4e-21
WP_002215458.1|695288_695549_-	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_002208847.1|695545_696682_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.5	4.5e-31
WP_002208848.1|696685_697141_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
WP_002215460.1|697137_697734_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_002208850.1|697749_698805_-|tail	tail protein	tail	M1PVV2	Vibrio_phage	27.2	1.3e-37
WP_002208852.1|698801_700208_-	hypothetical protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
WP_002208853.1|700474_701968_-|coat	coat protein	coat	NA	NA	NA	NA
>prophage 5
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	816848	871990	4685423	integrase,protease,transposase	Escherichia_phage(33.33%)	55	824323:824382	870103:872059
WP_002210751.1|816848_817667_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002210750.1|818026_819043_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	44.8	3.0e-79
WP_002210749.1|819052_820105_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002210748.1|820101_821253_+	galactokinase	NA	NA	NA	NA	NA
WP_002216814.1|821246_821399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002216812.1|821419_822316_+	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_002210747.1|822608_822944_+	phosphate starvation-inducible protein PsiF	NA	NA	NA	NA	NA
WP_002210746.1|823290_824043_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002210745.1|824224_824350_-	hypothetical protein	NA	NA	NA	NA	NA
824323:824382	attL	TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAA	NA	NA	NA	NA
WP_000255944.1|824408_825431_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|825430_826210_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210744.1|826219_827236_-	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A0B6VT43	Edwardsiella_phage	46.8	2.8e-72
WP_002210743.1|827684_828623_+	CDF family zinc transporter ZitB	NA	A0A1V0SED0	Indivirus	42.0	1.2e-10
WP_002210742.1|828737_829463_-	nicotinamide riboside transporter PnuC	NA	A0A2I7SAC7	Vibrio_phage	28.6	8.7e-20
WP_002210741.1|829584_830646_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_002210740.1|831481_832291_-	cell division protein CpoB	NA	NA	NA	NA	NA
WP_002210739.1|832300_832807_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_002210738.1|832857_834150_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_002210737.1|834269_835436_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_002210736.1|835547_835976_-	colicin uptake protein TolR	NA	NA	NA	NA	NA
WP_002210735.1|835988_836675_-	Tol-Pal system protein TolQ	NA	NA	NA	NA	NA
WP_002210734.1|836674_837076_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_011191945.1|837207_837495_-	cyd operon protein YbgE	NA	NA	NA	NA	NA
WP_002210732.1|837484_837619_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_002210731.1|837631_838771_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_002210730.1|838785_840354_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_002210729.1|841120_841993_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	34.7	3.6e-20
WP_002210728.1|841992_843159_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_002210726.1|844523_847331_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_002210725.1|847686_848403_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_002210724.1|848452_850219_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_002210723.1|850219_850567_-	succinate dehydrogenase membrane anchor subunit	NA	NA	NA	NA	NA
WP_002210722.1|850560_850950_-	succinate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_002210721.1|851659_852940_+	citrate synthase	NA	NA	NA	NA	NA
WP_002210720.1|853047_853626_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002210719.1|853749_854631_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_002210718.1|854717_856379_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002210717.1|856492_856834_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_002210716.1|856983_857268_-	RnfH family protein	NA	NA	NA	NA	NA
WP_011055694.1|857260_857797_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_002210714.1|857855_858338_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.2	3.4e-28
WP_002213759.1|858972_859431_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210713.1|859654_860854_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	50.2	2.2e-108
WP_002210712.1|860932_862021_+	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_002215945.1|862071_863742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215946.1|863903_864131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210710.1|864938_865826_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_002210709.1|865818_866019_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	51.7	1.6e-08
WP_002215949.1|866018_866561_+	ash family protein	NA	NA	NA	NA	NA
WP_002215950.1|866553_867513_+	toprim domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	41.0	1.6e-50
WP_002210707.1|867509_868598_+	AAA family ATPase	NA	A0A2H4JFA4	uncultured_Caudovirales_phage	60.4	1.4e-114
WP_002210705.1|868946_869261_-	putative addiction module antidote protein	NA	NA	NA	NA	NA
WP_002215951.1|869266_869584_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	48.1	2.0e-13
WP_000255944.1|870188_871211_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|871210_871990_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
870103:872059	attR	TGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAGGAGAGTTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTGCTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTAATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCCTCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATGGTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGTTATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATATGAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGGAGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACCCGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCACGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCGAAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTCGACAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGATGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCACGTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACATTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATTACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCAAAGTTCGCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGTGGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAGCTGTTCTTCCAGGTCATCGCTAAACGTTACGAAAAGAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGTTCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAAAGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACAATA	NA	NA	NA	NA
>prophage 6
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	1491838	1567815	4685423	plate,transposase	Escherichia_phage(33.33%)	56	NA	NA
WP_000255944.1|1491838_1492861_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|1492860_1493640_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210424.1|1493901_1494288_-	8-oxo-dGTP diphosphatase MutT	NA	A0A0B5CYJ3	Rhizoctonia_fumigata_mycovirus	30.4	8.4e-06
WP_002210426.1|1494582_1497297_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_002210427.1|1497374_1497908_-	secA regulator SecM	NA	NA	NA	NA	NA
WP_002210428.1|1497936_1498461_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_002228285.1|1498627_1499548_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_002210430.1|1499647_1500799_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002210431.1|1500871_1502128_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_002228100.1|1502154_1502982_-	cell division protein FtsQ	NA	NA	NA	NA	NA
WP_002210432.1|1502983_1503904_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_002216457.1|1503896_1505372_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_002210434.1|1505509_1506580_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_002210435.1|1506576_1507779_-	cell division protein FtsW	NA	NA	NA	NA	NA
WP_002210436.1|1507778_1509095_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_002210437.1|1509097_1510180_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_002210438.1|1510173_1511550_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_002210439.1|1511546_1513034_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_002210440.1|1513020_1514784_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA	NA
WP_002210441.1|1514849_1515167_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002210442.1|1515163_1516126_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002210443.1|1516128_1516587_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_087768171.1|1517141_1517231_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002210447.1|1518260_1519271_-	catabolite repressor/activator	NA	NA	NA	NA	NA
WP_002213759.1|1519775_1520234_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002424260.1|1520432_1520957_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_002228103.1|1520929_1522657_-	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.4	7.8e-59
WP_002216437.1|1523116_1524922_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.2	3.5e-38
WP_002216434.1|1525458_1526415_-	transcriptional regulator LeuO	NA	NA	NA	NA	NA
WP_002210452.1|1527092_1527308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213775.1|1527736_1528195_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002210453.1|1528341_1529904_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_002210454.1|1529906_1530998_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_002210455.1|1530999_1532430_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_002210456.1|1532444_1533047_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_002397472.1|1533287_1533539_-	sugar transporter	NA	NA	NA	NA	NA
WP_000255944.1|1533626_1534649_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|1534648_1535428_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210461.1|1537091_1538753_+	HTH-type transcriptional regulator SgrR	NA	NA	NA	NA	NA
WP_002214274.1|1539692_1540685_+	thiamine ABC transporter substrate binding subunit	NA	NA	NA	NA	NA
WP_002214276.1|1540660_1542268_+	thiamine/thiamine pyrophosphate ABC transporter permease ThiP	NA	NA	NA	NA	NA
WP_002210464.1|1542254_1542965_+	thiamine ABC transporter ATP-binding protein ThiQ	NA	G3M9Y6	Bacillus_virus	34.1	1.0e-20
WP_002210465.1|1543033_1543801_-	DedA family protein	NA	NA	NA	NA	NA
WP_002210466.1|1543996_1546366_+	DNA polymerase II	NA	A0A0P0YM26	Yellowstone_lake_phycodnavirus	25.5	1.5e-31
WP_002220588.1|1546826_1549733_+	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	37.6	3.0e-23
WP_002210468.1|1549988_1550342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002214734.1|1550363_1553804_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_002210469.1|1553865_1555476_-	OmpA family protein	NA	NA	NA	NA	NA
WP_002210470.1|1555472_1556828_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_002210471.1|1556947_1557439_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002214737.1|1557431_1557797_-	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
WP_002210473.1|1557802_1558420_-	DUF3540 domain-containing protein	NA	NA	NA	NA	NA
WP_002214739.1|1558412_1559516_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002210474.1|1561773_1564122_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	2.1e-14
WP_002210475.1|1564225_1566814_-	type VI secretion system ATPase TssH	NA	A0A248SJW6	Salicola_phage	28.7	1.9e-77
WP_002210476.1|1566831_1567815_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 7
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	1695119	1744876	4685423	plate,tRNA,protease,transposase	Escherichia_phage(30.0%)	42	NA	NA
WP_071525507.1|1695119_1695458_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002209171.1|1695801_1697175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209170.1|1697146_1697869_-	histidine kinase	NA	NA	NA	NA	NA
WP_002209169.1|1697918_1699244_-	site-specific DNA-methyltransferase	NA	NA	NA	NA	NA
WP_002209167.1|1700267_1701584_-	McrC family protein	NA	NA	NA	NA	NA
WP_002209166.1|1701580_1703644_-	McrB family protein	NA	K4I1H4	Acidithiobacillus_phage	33.2	5.3e-30
WP_000255944.1|1703777_1704800_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|1704799_1705579_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002228674.1|1705629_1705734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215294.1|1705918_1706230_+	biofilm peroxide resistance protein BsmA	NA	NA	NA	NA	NA
WP_002353634.1|1706301_1707933_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_002209161.1|1708352_1709093_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_002209159.1|1709211_1711746_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.3	2.5e-66
WP_002217229.1|1711986_1712412_-	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA	NA
WP_002209157.1|1712780_1714079_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	35.4	1.3e-66
WP_002217227.1|1714178_1714379_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_002209155.1|1714550_1715555_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_002209154.1|1715558_1716818_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_002209152.1|1717058_1718345_-	GTPase HflX	NA	NA	NA	NA	NA
WP_002209151.1|1718443_1718749_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_002209149.1|1718864_1719806_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002209148.1|1719798_1721706_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.3	4.3e-58
WP_002232017.1|1721721_1723635_-	N-acetylmuramoyl-L-alanine amidase AmiB	NA	M1HNA7	Bacillus_virus	28.2	2.1e-28
WP_002209146.1|1723642_1724113_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002209145.1|1724123_1725638_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_002209144.1|1725636_1726872_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_002209143.1|1727816_1728362_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.1	3.8e-28
WP_002209142.1|1728561_1729614_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_002209141.1|1729938_1730820_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_002209140.1|1730861_1734203_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA	NA
WP_002209139.1|1734323_1735301_-	elongation factor P--(R)-beta-lysine ligase	NA	NA	NA	NA	NA
WP_002209138.1|1735460_1735652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209137.1|1735758_1737582_+	fumarate reductase (quinol) flavoprotein subunit	NA	A0A2P0ZL82	Lactobacillus_phage	27.6	1.0e-16
WP_002209136.1|1737574_1738309_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_002209135.1|1738325_1738718_+	fumarate reductase subunit FrdC	NA	NA	NA	NA	NA
WP_002209134.1|1738734_1739091_+	fumarate reductase subunit FrdD	NA	NA	NA	NA	NA
WP_002213775.1|1739288_1739747_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002228124.1|1739965_1740280_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA	NA
WP_002209131.1|1740526_1741093_-	elongation factor P	NA	NA	NA	NA	NA
WP_002228125.1|1741128_1742157_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
WP_032465615.1|1742441_1742786_-	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
WP_042593824.1|1743853_1744876_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	5.4e-201
>prophage 8
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	2464341	2515153	4685423	tRNA,protease,transposase	Bacillus_phage(25.0%)	44	NA	NA
WP_002208973.1|2464341_2464830_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_002208972.1|2465018_2466083_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	NA	NA	NA	NA
WP_002208971.1|2466131_2467508_-	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.4	1.5e-17
WP_002208970.1|2467504_2468203_-	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	29.5	1.8e-06
WP_002208969.1|2468376_2468865_+	periplasmic heavy metal sensor	NA	NA	NA	NA	NA
WP_002221684.1|2469321_2469498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002353252.1|2469581_2470502_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	54.3	8.6e-73
WP_002208967.1|2471063_2471966_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA	NA
WP_002208966.1|2472183_2473167_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_002208965.1|2473387_2474377_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002218867.1|2474626_2475403_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002208963.1|2475520_2476948_-	anion permease	NA	NA	NA	NA	NA
WP_002208962.1|2477013_2477727_-	4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_002208961.1|2477723_2478461_-	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_002208960.1|2478597_2479833_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002208959.1|2480064_2480832_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_002215864.1|2480960_2481596_-	YiiQ family protein	NA	NA	NA	NA	NA
WP_002208957.1|2481743_2482178_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_002208956.1|2482518_2483265_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
WP_002223912.1|2483419_2484430_-	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_042593843.1|2484666_2486181_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_002208954.1|2486357_2487206_-	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	27.5	3.2e-13
WP_002208953.1|2487833_2488073_+	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
WP_002213759.1|2488280_2488739_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_001297096.1|2490456_2491236_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|2491235_2492258_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002208949.1|2493169_2494462_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_002215873.1|2494674_2494914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002228141.1|2495543_2496128_+	DUF4232 domain-containing protein	NA	NA	NA	NA	NA
WP_042593845.1|2496244_2496730_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
WP_002208944.1|2496871_2497789_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_002208943.1|2498024_2499356_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.8	1.2e-43
WP_002208942.1|2499426_2499951_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_002208941.1|2500050_2500896_-	cell division protein FtsN	NA	NA	NA	NA	NA
WP_002216730.1|2500961_2501990_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
WP_002208938.1|2502342_2504541_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_002216737.1|2504783_2504999_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_002208936.1|2505577_2506033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002208935.1|2506381_2506699_-	met regulon transcriptional regulator MetJ	NA	NA	NA	NA	NA
WP_002208934.1|2508238_2510674_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA	NA
WP_002208933.1|2510906_2511791_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_100067904.1|2511976_2513331_-|transposase	IS3-like element IS1661 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.7	1.1e-55
WP_002208930.1|2513523_2514282_-	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002216348.1|2514316_2515153_-|protease	rhomboid family intramembrane serine protease GlpG	protease	NA	NA	NA	NA
>prophage 9
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	3157740	3228435	4685423	tRNA,holin,transposase	uncultured_Mediterranean_phage(23.08%)	56	NA	NA
WP_002216043.1|3157740_3158046_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	46.2	2.0e-10
WP_002208705.1|3158242_3159847_+	chitin-binding domain protein	NA	Q9J8B0	Spodoptera_exigua_multiple_nucleopolyhedrovirus	31.0	2.3e-20
WP_002216044.1|3160306_3161218_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002208707.1|3163092_3164553_+	beta-Ala-His dipeptidase	NA	NA	NA	NA	NA
WP_002208708.1|3164666_3165725_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002208709.1|3166080_3167028_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_002214684.1|3167271_3167499_-	(Na+)-NQR maturation NqrM	NA	NA	NA	NA	NA
WP_002227821.1|3167511_3168534_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_002208711.1|3168574_3169798_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit F	NA	NA	NA	NA	NA
WP_002208713.1|3169813_3170410_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit E	NA	NA	NA	NA	NA
WP_002208714.1|3170416_3171046_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit D	NA	NA	NA	NA	NA
WP_002208715.1|3171038_3171839_-	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA	NA
WP_002208716.1|3171828_3173070_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit B	NA	NA	NA	NA	NA
WP_002208717.1|3173073_3174417_-	Na(+)-translocating NADH-quinone reductase subunit A	NA	NA	NA	NA	NA
WP_002208718.1|3174912_3175653_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_002208719.1|3175617_3176391_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_002208720.1|3176593_3177175_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	30.8	3.7e-13
WP_002214691.1|3177414_3179862_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_002208721.1|3180033_3180780_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_002208722.1|3180781_3182635_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_002208725.1|3182789_3188522_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002214693.1|3188562_3190353_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
WP_071525551.1|3191054_3191156_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002208729.1|3191441_3192734_-	allantoate amidohydrolase	NA	NA	NA	NA	NA
WP_002208730.1|3192733_3193192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000255944.1|3193261_3194284_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|3194283_3195063_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002208688.1|3195072_3198780_-	AAA family ATPase	NA	G3MAB6	Bacillus_virus	26.1	2.2e-10
WP_002208687.1|3198776_3200021_-	exonuclease subunit SbcD	NA	NA	NA	NA	NA
WP_002208685.1|3200288_3200978_+	phosphate response regulator transcription factor PhoB	NA	W8CYM9	Bacillus_phage	37.1	1.7e-36
WP_002208684.1|3201002_3202319_+	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	29.2	7.1e-28
WP_002215524.1|3202340_3203405_+	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002208680.1|3203878_3205198_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_002208679.1|3205273_3206665_+	proline-specific permease ProY	NA	NA	NA	NA	NA
WP_042593856.1|3206882_3207341_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002208678.1|3207936_3209766_+	maltodextrin glucosidase	NA	NA	NA	NA	NA
WP_002222306.1|3209762_3209945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002208677.1|3209920_3210601_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002213775.1|3213001_3213460_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002208675.1|3213674_3214277_-	peroxiredoxin C	NA	NA	NA	NA	NA
WP_002216927.1|3214575_3215157_-	ACP phosphodiesterase	NA	NA	NA	NA	NA
WP_002208673.1|3215359_3216430_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002208672.1|3216522_3217647_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.8	3.2e-90
WP_002208671.1|3217758_3218094_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.6	6.4e-10
WP_002208670.1|3218121_3219969_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_002208669.1|3219979_3220948_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	39.7	1.9e-46
WP_002213759.1|3221155_3221614_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002217139.1|3221911_3222607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002217141.1|3222639_3223233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208668.1|3223303_3223753_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_002208667.1|3223902_3225012_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	34.2	1.5e-50
WP_002208666.1|3225147_3225618_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.7	3.5e-30
WP_002208665.1|3225638_3226055_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_002208664.1|3226295_3227285_+	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_002208663.1|3227277_3227763_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_042593858.1|3227976_3228435_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	3439398	3499029	4685423	plate,tRNA,transposase	Escherichia_phage(54.55%)	50	NA	NA
WP_002213775.1|3439398_3439857_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002222185.1|3440049_3441465_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002211622.1|3442699_3443884_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_002211621.1|3444318_3445548_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_002354622.1|3445640_3445955_-	DUF2502 domain-containing protein	NA	NA	NA	NA	NA
WP_002211618.1|3446224_3447214_-	glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_002211617.1|3447349_3448228_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211616.1|3448330_3448807_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_002211615.1|3448987_3449959_+	glucokinase	NA	NA	NA	NA	NA
WP_002211614.1|3450036_3451284_-	DUF1479 domain-containing protein	NA	NA	NA	NA	NA
WP_002211613.1|3451549_3452785_+	alanine transaminase	NA	NA	NA	NA	NA
WP_002211611.1|3453048_3453573_+	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	47.1	9.3e-24
WP_002211610.1|3453667_3454099_-	hypothetical protein	NA	Q7Y3V7	Yersinia_phage	48.2	2.4e-25
WP_002215847.1|3454688_3455360_+	lipoprotein	NA	NA	NA	NA	NA
WP_002215846.1|3455386_3455743_+	DUF4810 domain-containing protein	NA	NA	NA	NA	NA
WP_002211607.1|3455739_3456396_+	DUF799 domain-containing protein	NA	NA	NA	NA	NA
WP_002211606.1|3456641_3457211_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_002228419.1|3457207_3457804_-	molecular chaperone	NA	A0A077SLS7	Escherichia_phage	49.2	9.2e-44
WP_002211604.1|3458285_3459062_-	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	41.4	3.9e-42
WP_002211603.1|3459063_3459681_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	68.3	1.1e-87
WP_002211602.1|3459692_3462119_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	54.4	1.1e-255
WP_002211601.1|3462949_3463798_+	DUF4225 domain-containing protein	NA	NA	NA	NA	NA
WP_002354621.1|3464027_3464507_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_002211599.1|3464973_3465498_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
WP_002211598.1|3465570_3466620_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	3.9e-21
WP_002215840.1|3466616_3468203_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002211596.1|3468258_3469278_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002211594.1|3469606_3470701_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_002211590.1|3471955_3472558_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002215321.1|3472915_3473398_-	DcrB-related protein	NA	NA	NA	NA	NA
WP_002211588.1|3473394_3475077_-	OmpA family protein	NA	NA	NA	NA	NA
WP_002211587.1|3475077_3475761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211586.1|3475757_3477095_-	glycosyl transferase	NA	A0A292GJ55	Xanthomonas_phage	32.8	2.0e-70
WP_002215319.1|3477134_3478166_-	fimbrial protein	NA	NA	NA	NA	NA
WP_002211584.1|3478172_3479354_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_002211583.1|3479452_3480478_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002211582.1|3480477_3482358_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002215317.1|3483140_3485816_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	32.3	1.0e-81
WP_002211580.1|3486016_3486562_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002211579.1|3486718_3487480_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA	NA
WP_002215157.1|3487607_3489158_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002209743.1|3489179_3490388_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211577.1|3490412_3491603_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002211576.1|3491587_3492196_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002211575.1|3492300_3492825_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002211574.1|3492848_3494351_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002211573.1|3494676_3495162_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_002211572.1|3495435_3495975_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211571.1|3495978_3497328_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_042593824.1|3498006_3499029_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	5.4e-201
>prophage 11
NZ_CP009492	Yersinia pestis strain PBM19 chromosome, complete genome	4685423	4385625	4425672	4685423	lysis,tail,integrase,transposase	Cronobacter_phage(15.79%)	48	4383977:4384007	4425698:4425728
4383977:4384007	attL	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
WP_097608205.1|4385625_4385994_-|tail	phage tail protein	tail	B6SCW7	Bacteriophage	42.0	5.0e-08
WP_002211696.1|4386055_4386973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211697.1|4386989_4387988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211698.1|4387987_4391191_-	host specificity protein J	NA	F1C571	Cronobacter_phage	60.5	0.0e+00
WP_002359202.1|4391366_4391588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211700.1|4391762_4392383_-|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	57.0	3.2e-55
WP_002211701.1|4392438_4392654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002214482.1|4392796_4393348_-	zinc ribbon domain-containing protein	NA	S4TR42	Salmonella_phage	58.0	9.5e-27
WP_002211704.1|4393446_4394454_-	hypothetical protein	NA	A0A2H4J0P1	uncultured_Caudovirales_phage	33.0	4.1e-36
WP_002211705.1|4394527_4394695_-	hypothetical protein	NA	G9L6D7	Escherichia_phage	61.8	5.2e-13
WP_002211706.1|4394818_4395250_+	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	58.4	2.5e-30
WP_002211707.1|4395328_4395961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211708.1|4396221_4396932_-	peptidase P60	NA	K7P6F5	Enterobacteria_phage	76.8	1.3e-108
WP_002211709.1|4396934_4397687_-|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	67.7	9.4e-102
WP_029788079.1|4397807_4398215_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
WP_002211710.1|4398569_4398911_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	50.0	1.7e-21
WP_071525538.1|4402418_4402679_-	hypothetical protein	NA	A0A0S2SY90	Pseudomonas_phage	50.0	3.7e-13
WP_002211712.1|4402726_4403038_-	hypothetical protein	NA	I6PDG2	Cronobacter_phage	58.3	1.4e-30
WP_002211713.1|4403050_4403971_-|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	49.1	4.4e-61
WP_002211714.1|4404036_4404444_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_002211715.1|4404440_4405025_-	hypothetical protein	NA	G8C7Q1	Escherichia_phage	52.1	3.6e-48
WP_002211716.1|4405026_4405377_-	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	6.9e-31
WP_002211717.1|4405378_4405633_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	53.1	2.2e-18
WP_002211718.1|4405629_4406112_-	hypothetical protein	NA	G8C7P9	Escherichia_phage	46.1	6.4e-27
WP_002211719.1|4406159_4407365_-	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	79.2	1.8e-142
WP_002211720.1|4407378_4408152_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	62.3	2.8e-69
WP_002211721.1|4408273_4409386_-	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.2	6.0e-121
WP_002228446.1|4409386_4410028_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	54.1	3.8e-59
WP_002228445.1|4410046_4410775_-	hypothetical protein	NA	A0A1B0VMH0	Pseudomonas_phage	51.4	4.6e-61
WP_002211722.1|4410774_4411749_-	hypothetical protein	NA	A0A1W6JNY3	Morganella_phage	81.1	2.3e-153
WP_002211723.1|4413008_4413593_-	hypothetical protein	NA	A0A0R6PHH0	Moraxella_phage	70.7	4.8e-69
WP_002211725.1|4414075_4414711_-	hypothetical protein	NA	I6S676	Salmonella_phage	71.4	7.2e-87
WP_002211727.1|4415167_4415881_-	hypothetical protein	NA	Q5MBW0	Stx1-converting_phage	60.2	7.6e-69
WP_002211729.1|4416426_4416885_-|lysis	lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	45.3	4.9e-21
WP_002211730.1|4416869_4417382_-	lysozyme	NA	I6PBN2	Cronobacter_phage	61.6	9.7e-50
WP_002430108.1|4417412_4417610_-	hypothetical protein	NA	B6SD15	Bacteriophage	64.4	4.9e-18
WP_002215644.1|4417855_4418131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211731.1|4418127_4418337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211732.1|4418760_4419324_-	hypothetical protein	NA	B6SD63	Bacteriophage	58.0	9.4e-30
WP_002215638.1|4419372_4419591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215636.1|4419594_4419984_-	antitermination protein	NA	A0A1W6JNX1	Morganella_phage	68.8	1.4e-45
WP_002211735.1|4419984_4420590_-	recombination protein NinG	NA	A0A1P8DTE0	Proteus_phage	56.9	2.8e-56
WP_002211736.1|4420663_4421110_-	recombination protein NinB	NA	A0A2H4J8D9	uncultured_Caudovirales_phage	62.5	3.9e-47
WP_071525537.1|4421085_4421835_+	DNA adenine methylase	NA	Q5QF26	Pseudomonas_virus	48.5	1.5e-54
WP_002215632.1|4422134_4422395_+	excisionase family protein	NA	Q859D3	Escherichia_coli_phage	42.9	1.7e-10
WP_001297096.1|4422562_4423342_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|4423341_4424364_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002211738.1|4424433_4425672_+|integrase	site-specific integrase	integrase	Q20GI2	Phage_258-320	53.3	2.3e-121
4425698:4425728	attR	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
>prophage 1
NZ_CP009491	Yersinia pestis strain PBM19 plasmid pCD1, complete sequence	70288	26193	51548	70288	transposase,protease	Enterobacteria_phage(33.33%)	20	NA	NA
WP_002213294.1|26193_26601_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	29.2	4.7e-07
WP_002213244.1|26624_26942_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002213246.1|27113_27572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042469136.1|27640_27910_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002213256.1|30520_32836_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	51.6	1.0e-279
WP_002213258.1|32999_33551_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	80.3	5.9e-77
WP_002224338.1|33569_34034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002229829.1|34172_34502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086016640.1|34601_35700_+|transposase	IS3-like element ISYpe1 family transposase	transposase	S5WIU1	Leptospira_phage	38.5	1.4e-45
WP_002213267.1|35848_36274_-	type III secretion system chaperone SycH	NA	NA	NA	NA	NA
WP_002213403.1|40982_41375_-	YopE transcriptional regulator YerA	NA	NA	NA	NA	NA
WP_002229754.1|41568_42228_+	type III secretion system effector GTPase activator YopE	NA	NA	NA	NA	NA
WP_002213360.1|42367_42667_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002224342.1|42659_42902_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_154020274.1|43768_44005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213354.1|44164_45130_-	ParB/RepB/Spo0J family plasmid partition protein	NA	Q7Y3Y7	Yersinia_phage	56.6	3.1e-89
WP_002220902.1|45126_46293_-	plasmid-partitioning protein SopA	NA	Q7Y3Y6	Yersinia_phage	85.3	3.5e-196
WP_002229770.1|48304_48934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213007.1|49531_50080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213006.1|50579_51548_+|protease	T3SS effector cysteine protease YopT	protease	NA	NA	NA	NA
>prophage 1
NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	96196	0	61567	96196	transposase,terminase,tail	Salmonella_phage(85.48%)	73	NA	NA
WP_002211774.1|497_1295_-|tail	tail protein	tail	J9Q7R4	Salmonella_phage	96.2	1.4e-156
WP_002211775.1|1287_1986_-|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	99.1	7.1e-136
WP_000440566.1|2075_2411_-|tail	phage tail protein	tail	J9Q6E1	Salmonella_phage	97.3	5.7e-59
WP_002211776.1|2452_7030_-	tape measure protein	NA	J9Q712	Salmonella_phage	90.5	0.0e+00
WP_000952684.1|7037_7262_-	hypothetical protein	NA	J9Q7F7	Salmonella_phage	100.0	4.2e-34
WP_000163862.1|7387_7705_-	hypothetical protein	NA	J9Q7R3	Salmonella_phage	98.1	6.0e-50
WP_002211778.1|7764_8511_-	Ig domain-containing protein	NA	J9Q7Y4	Salmonella_phage	98.8	5.2e-129
WP_002211779.1|8585_8969_-	hypothetical protein	NA	J9Q6D8	Salmonella_phage	98.4	1.1e-66
WP_002211780.1|8970_9444_-	hypothetical protein	NA	J9Q711	Salmonella_phage	99.4	8.9e-82
WP_001027662.1|9434_9779_-	hypothetical protein	NA	J9Q7F6	Salmonella_phage	100.0	1.9e-57
WP_002211781.1|9876_10710_-	hypothetical protein	NA	J9Q7R2	Salmonella_phage	99.6	2.9e-152
WP_002211782.1|10709_11144_-	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	99.3	3.1e-73
WP_002211783.1|11187_11850_-	Ig domain-containing protein	NA	J9Q6D6	Salmonella_phage	97.2	8.5e-107
WP_002211784.1|11924_12800_-	hypothetical protein	NA	J9Q710	Salmonella_phage	99.7	8.5e-163
WP_002211785.1|12826_13660_-	hypothetical protein	NA	J9Q7F4	Salmonella_phage	91.3	5.8e-137
WP_002211786.1|13682_15257_-	hypothetical protein	NA	J9Q7R1	Salmonella_phage	99.2	2.4e-301
WP_002211787.1|15290_16547_-|terminase	terminase	terminase	J9Q7Y2	Salmonella_phage	100.0	1.8e-251
WP_002211788.1|16549_17191_-	hypothetical protein	NA	J9Q6D4	Salmonella_phage	98.1	1.2e-108
WP_000176291.1|17386_17653_-	hypothetical protein	NA	J9Q757	Salmonella_phage	100.0	1.3e-42
WP_002211789.1|17662_18553_-	hypothetical protein	NA	J9Q7I6	Salmonella_phage	99.7	6.2e-169
WP_002211790.1|18558_18813_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	97.6	2.0e-40
WP_002211791.1|18805_19444_-	ATP-binding cassette domain-containing protein	NA	J9Q807	Salmonella_phage	98.1	4.7e-110
WP_002211792.1|19440_20109_-	ParB N-terminal domain-containing protein	NA	J9Q6L1	Salmonella_phage	98.2	9.5e-114
WP_002228791.1|20108_20807_-	ParB N-terminal domain-containing protein	NA	J9Q756	Salmonella_phage	98.7	9.6e-125
WP_002211794.1|20871_22431_+	DEAD/DEAH box helicase	NA	J9Q7I4	Salmonella_phage	99.0	1.1e-293
WP_002214131.1|22433_22712_+	hypothetical protein	NA	J9Q7T9	Salmonella_phage	97.8	4.4e-41
WP_002211796.1|22771_23194_+	hypothetical protein	NA	J9Q806	Salmonella_phage	85.0	4.1e-62
WP_002214134.1|23198_23726_+	transcriptional regulator	NA	J9Q6L0	Salmonella_phage	98.0	6.4e-81
WP_002211799.1|24047_24698_+	hypothetical protein	NA	J9Q754	Salmonella_phage	99.5	4.1e-114
WP_002214137.1|24782_25010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211801.1|25648_26131_-	hypothetical protein	NA	J9Q805	Salmonella_phage	94.4	5.1e-85
WP_002211802.1|26336_26618_-	hypothetical protein	NA	J9Q753	Salmonella_phage	93.5	6.1e-46
WP_042593787.1|26817_27276_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	34.5	1.1e-12
WP_002214145.1|27484_28054_-	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	100.0	5.8e-104
WP_002213303.1|28066_28813_-	hypothetical protein	NA	J9Q6J5	Salmonella_phage	96.4	4.1e-134
WP_038918515.1|28802_29162_-	hypothetical protein	NA	J9Q741	Salmonella_phage	100.0	5.2e-58
WP_002213300.1|30948_32034_-	exonuclease	NA	J9Q7S9	Salmonella_phage	98.6	7.7e-206
WP_002213298.1|32449_33472_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002214160.1|33831_34476_-	hypothetical protein	NA	J9Q739	Salmonella_phage	98.1	1.8e-122
WP_002214164.1|35220_36285_+	replication protein RepA	NA	J9Q7H0	Salmonella_phage	98.6	2.4e-188
WP_002222711.1|36853_37066_-	hypothetical protein	NA	J9Q7S8	Salmonella_phage	95.7	6.8e-34
WP_002227818.1|37065_37401_-	hypothetical protein	NA	J9Q7Z5	Salmonella_phage	91.0	5.2e-52
WP_002228796.1|37397_37577_-	hypothetical protein	NA	J9Q6J1	Salmonella_phage	86.4	5.8e-18
WP_002228797.1|37617_37893_-	hypothetical protein	NA	J9Q738	Salmonella_phage	95.6	1.7e-45
WP_002222869.1|37960_38371_-	hypothetical protein	NA	J9Q7G9	Salmonella_phage	97.8	4.1e-75
WP_002222868.1|38354_38726_-	DUF2591 domain-containing protein	NA	J9Q7S7	Salmonella_phage	87.8	4.0e-61
WP_002222866.1|38879_39710_-	hypothetical protein	NA	J9Q7Z4	Salmonella_phage	98.6	9.3e-127
WP_002213439.1|39713_39914_-	hypothetical protein	NA	J9Q6J0	Salmonella_phage	97.0	1.1e-25
WP_161597819.1|40004_41036_-	recombinase	NA	J9Q736	Salmonella_phage	99.1	6.9e-196
WP_000920226.1|41083_41350_-	hypothetical protein	NA	J9Q7G8	Salmonella_phage	100.0	1.6e-40
WP_002225551.1|41349_42294_-	exonuclease	NA	J9Q7S6	Salmonella_phage	99.0	1.3e-180
WP_002213132.1|42354_43383_-	hypothetical protein	NA	J9Q7Z3	Salmonella_phage	98.5	1.3e-165
WP_002213135.1|43502_43934_-	hypothetical protein	NA	J9Q6I8	Salmonella_phage	98.6	2.6e-72
WP_002215095.1|44154_44406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213141.1|44478_45042_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	64.6	2.2e-63
WP_002425587.1|45071_45497_-	hypothetical protein	NA	J9Q7S4	Salmonella_phage	100.0	7.5e-72
WP_050551281.1|45511_46006_-	DNA polymerase III	NA	J9Q7Z2	Salmonella_phage	99.4	3.2e-90
WP_080327060.1|46066_46474_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	100.0	8.8e-62
WP_002211744.1|47981_49991_-	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	30.3	7.7e-26
WP_002211745.1|50063_50294_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_002211746.1|51006_51513_-	antirestriction protein	NA	A0A1I9S7Y0	Rhodococcus_phage	29.5	1.1e-08
WP_002211747.1|51911_52691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215082.1|52744_53164_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_002211748.1|53174_53396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211749.1|53395_54073_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
WP_002211750.1|54573_54774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002228775.1|54935_56333_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_002215070.1|56711_57683_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	67.3	1.5e-112
WP_002211752.1|57679_58885_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	90.5	1.7e-206
WP_002211753.1|59186_59414_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002215068.1|59413_59740_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002211754.1|59939_60560_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	31.1	6.5e-08
WP_002215065.1|60625_61567_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	54.8	1.0e-68
>prophage 2
NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	96196	75944	81712	96196	integrase	Salmonella_phage(66.67%)	5	75834:75847	82146:82159
75834:75847	attL	GTATGGAATCATTG	NA	NA	NA	NA
WP_002353208.1|75944_77048_+|integrase	site-specific integrase	integrase	A0A1P8DTG6	Proteus_phage	30.9	5.2e-24
WP_002228802.1|77042_77429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002228800.1|77691_77904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211766.1|78013_80380_+	porphyrin biosynthesis protein	NA	J9Q7G6	Salmonella_phage	94.4	0.0e+00
WP_002211767.1|80476_81712_+	AAA domain-containing protein	NA	J9Q733	Salmonella_phage	99.3	3.0e-238
82146:82159	attR	GTATGGAATCATTG	NA	NA	NA	NA
>prophage 3
NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	96196	86038	96097	96196	tail	Salmonella_phage(40.0%)	5	NA	NA
WP_001297096.1|86038_86818_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002211769.1|86951_87560_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	62.2	4.8e-64
WP_002211770.1|87861_90750_-|tail	phage tail protein	tail	J9Q6E3	Salmonella_phage	33.1	4.5e-11
WP_002211771.1|90830_91409_-	DUF4376 domain-containing protein	NA	Q9LA61	Enterobacterial_phage	38.8	3.4e-27
WP_002214118.1|91465_96097_-	DUF1983 domain-containing protein	NA	J9Q713	Salmonella_phage	88.6	0.0e+00
