The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	14436	23486	2022507		Klosneuvirus(16.67%)	8	NA	NA
WP_042516843.1|14436_16443_+	M3 family metallopeptidase	NA	A0A1V0SID3	Klosneuvirus	26.8	2.6e-50
WP_042516844.1|16535_16892_+	YraN family protein	NA	NA	NA	NA	NA
WP_042516845.1|16888_17986_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_013922212.1|17987_18479_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	1.5e-20
WP_042516846.1|18583_19168_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	36.9	7.5e-22
WP_042516847.1|19170_21480_-	phosphoribosylamine--glycine ligase	NA	A0A0M4JBD3	Mollivirus	31.3	2.3e-26
WP_042516848.1|21479_22523_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	36.3	5.4e-55
WP_012279910.1|22637_23486_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	40.7	1.4e-32
>prophage 2
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	34630	80394	2022507	holin,transposase,protease	Salmonella_phage(25.0%)	50	NA	NA
WP_042516855.1|34630_35422_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_004286440.1|35983_36541_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.7	2.3e-36
WP_042516856.1|36683_37184_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_042516857.1|37263_37869_+	PQ-loop repeat-containing protein	NA	NA	NA	NA	NA
WP_042516858.1|37972_38599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042519096.1|38784_39843_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	45.5	3.4e-81
WP_012279925.1|39845_40448_+	DedA family protein	NA	NA	NA	NA	NA
WP_042516859.1|40444_41206_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
WP_012279927.1|41214_42585_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_012279928.1|42588_43128_+	CvpA family protein	NA	NA	NA	NA	NA
WP_042516860.1|43124_44123_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_035735071.1|44435_45086_-	peptidase C39 family protein	NA	NA	NA	NA	NA
WP_035735070.1|45227_45593_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042516861.1|45589_47749_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	44.7	1.1e-137
WP_042516862.1|47750_48806_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042516863.1|48941_49829_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012279935.1|49910_50486_+	LemA family protein	NA	NA	NA	NA	NA
WP_035735066.1|50487_51558_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_080775375.1|51648_52590_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_004286458.1|52710_53034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042516865.1|53068_53776_-	ribonuclease PH	NA	NA	NA	NA	NA
WP_042516866.1|53873_54389_+	chorismate lyase	NA	NA	NA	NA	NA
WP_042516867.1|54378_55236_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_042519098.1|55250_55610_+	DUF393 domain-containing protein	NA	NA	NA	NA	NA
WP_004286463.1|55627_56023_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_042516855.1|56058_56850_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042516868.1|56903_57305_+	DUF3574 domain-containing protein	NA	NA	NA	NA	NA
WP_042516869.1|57441_58200_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_042516870.1|58217_58838_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_042519100.1|58888_59809_-	bile acid:sodium symporter family protein	NA	NA	NA	NA	NA
WP_004286486.1|59945_60083_-	DUF2256 domain-containing protein	NA	NA	NA	NA	NA
WP_042517741.1|61432_62224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042516872.1|63907_64138_-	TIGR03643 family protein	NA	NA	NA	NA	NA
WP_042516873.1|64160_64883_-	SDR family NAD(P)-dependent oxidoreductase	NA	Q56AQ6	Bacillus_thuringiensis_phage	37.1	6.2e-34
WP_042516874.1|64985_66305_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_042516875.1|66406_67036_-	OmpA family protein	NA	NA	NA	NA	NA
WP_042516876.1|67048_67294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042516877.1|67303_68608_-	PD40 domain-containing protein	NA	NA	NA	NA	NA
WP_042516878.1|68619_69543_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_004286496.1|69529_69970_-	protein TolR	NA	NA	NA	NA	NA
WP_042516879.1|69987_70695_-	protein TolQ	NA	NA	NA	NA	NA
WP_004286498.1|70850_71075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004286499.1|71084_71906_-|holin	phosphatidylcholine/phosphatidylserine synthase	holin	NA	NA	NA	NA
WP_042516880.1|71919_72282_-	chorismate mutase	NA	NA	NA	NA	NA
WP_035735051.1|72293_73250_-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_042516881.1|73230_73695_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_042516882.1|73876_75133_+	OmpA family protein	NA	NA	NA	NA	NA
WP_173405548.1|75129_76233_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_042516884.1|76306_78022_+	aspartate-alanine antiporter	NA	NA	NA	NA	NA
WP_042516855.1|79602_80394_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	394832	438952	2022507	transposase,protease,integrase	Acinetobacter_phage(42.86%)	51	403397:403456	441228:441558
WP_042517099.1|394832_395297_+|protease	hydrogenase maturation protease	protease	NA	NA	NA	NA
WP_042517102.1|395306_395696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035737259.1|395783_397463_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	26.4	2.7e-40
WP_042517104.1|397675_398896_+	MFS transporter	NA	NA	NA	NA	NA
WP_012280250.1|398911_399124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517105.1|399271_400558_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042517107.1|400538_401498_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_144402801.1|401672_401903_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_173405532.1|402010_402172_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_173405533.1|402215_402506_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_042516855.1|402583_403375_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_144402802.1|403390_403669_-	hypothetical protein	NA	NA	NA	NA	NA
403397:403456	attL	GTTAATCTGTTTAGCCTTAGCTTTGAGTTTTAACTCTAGCTTCCTTTCAACTTTAGCTAA	NA	NA	NA	NA
WP_052471061.1|403715_404741_-	MFS transporter	NA	NA	NA	NA	NA
WP_052471062.1|404786_405371_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042517110.1|406401_407322_-	ribokinase	NA	NA	NA	NA	NA
WP_042517112.1|407438_410015_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.2	2.2e-25
WP_042517113.1|410110_410764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517115.1|410764_412126_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	NA	NA	NA	NA
WP_042517116.1|412218_412632_-	GyrI-like domain-containing protein	NA	NA	NA	NA	NA
WP_042517118.1|412656_413247_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_173405549.1|413257_413935_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_042519141.1|414065_415073_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	37.5	2.8e-40
WP_042517123.1|415069_415648_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	38.5	7.4e-30
WP_042517124.1|415651_417196_-	anthranilate synthase component 1	NA	NA	NA	NA	NA
WP_004286833.1|417196_417484_-	trp operon repressor	NA	NA	NA	NA	NA
WP_004286832.1|417938_419435_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_042517126.1|419917_421393_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_004286830.1|421430_422534_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	25.3	6.8e-32
WP_042517128.1|422535_423684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517130.1|423842_425372_+	APC family permease	NA	NA	NA	NA	NA
WP_042517132.1|425368_425836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004286827.1|425926_426232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004286826.1|426327_427200_-	DMT family transporter	NA	NA	NA	NA	NA
WP_035737292.1|427349_427538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167524317.1|427544_427721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517134.1|427939_428212_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042517135.1|428455_428830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517137.1|429120_430575_-	DUF3987 domain-containing protein	NA	NA	NA	NA	NA
WP_042517139.1|430564_431461_-	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_042517140.1|431477_431996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517142.1|432000_432354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013922665.1|432424_432634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517145.1|432655_433852_-|integrase	site-specific integrase	integrase	B7SYF8	Stenotrophomonas_phage	27.4	9.0e-30
WP_042517147.1|433867_434062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052471063.1|434061_434277_-	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_042517150.1|434593_435217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517152.1|435327_435606_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
WP_042517154.1|435608_435839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042519143.1|435908_436145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517155.1|436134_436659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517157.1|437713_438952_-|integrase	site-specific integrase	integrase	B7SYF8	Stenotrophomonas_phage	26.1	6.9e-33
441228:441558	attR	TTAGCTAAAGTTGAAAGGAAGCTAGAGTTAAAACTCAAAGCTAAGGCTAAACAGATTAACAAGTCTTATCCAGGAGAAATGTTTAATATTGATACTAAACGATTACCAGCGATAAAAGATTCACAGCTTAGAGAATATCTATTTGTAGGCATAGATGCTTATTCTAGGGAGCTTTATGCTGATATTTTGCCTGATAAGAGTCAATTCTCATCTACAATGTTTCTACACCGTTTGGTTGATGAATGTCCATATACGATAGAAATAGCTTATACTGATAATGGCACTGAATATAAAGGTACTACTGACCATGAATTTGTTAAAGCTTGTAGGC	NA	NA	NA	NA
>prophage 4
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	517372	529140	2022507	transposase,tRNA	Staphylococcus_phage(25.0%)	11	NA	NA
WP_004286749.1|517372_519157_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	43.2	4.2e-23
WP_042517262.1|519270_520350_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_042517264.1|520378_521323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042517266.1|521419_521938_-	peptide deformylase	NA	A0A067XQZ3	Caulobacter_phage	40.6	3.4e-18
WP_042517268.1|521941_522385_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	43.6	4.2e-25
WP_042517271.1|522388_523600_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	44.3	6.2e-87
WP_042517275.1|523592_524198_-	riboflavin synthase	NA	A0A1V0SE20	Indivirus	37.0	7.2e-20
WP_042517277.1|524190_525261_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	37.7	7.0e-50
WP_042516855.1|525638_526430_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042517279.1|526502_527771_+	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	35.1	9.5e-30
WP_042517282.1|527889_529140_+	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	33.1	8.8e-28
>prophage 5
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	838610	851743	2022507		Salmonella_virus(33.33%)	10	NA	NA
WP_012280619.1|838610_839984_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	31.0	2.7e-54
WP_012280620.1|840012_841152_+	GDP-mannose 4,6-dehydratase	NA	M1HAR7	Acanthocystis_turfacea_Chlorella_virus	59.4	9.5e-122
WP_042517628.1|841198_841483_+	four helix bundle protein	NA	NA	NA	NA	NA
WP_042517629.1|841575_842715_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	45.9	3.1e-88
WP_042517630.1|842912_843803_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	61.3	2.9e-102
WP_042517631.1|843799_844372_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	52.6	2.1e-37
WP_042517632.1|844520_845396_+	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	40.9	7.5e-42
WP_042517634.1|845439_847491_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	33.9	2.8e-55
WP_052471089.1|847625_849626_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	34.8	5.0e-49
WP_042517637.1|849751_851743_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	29.3	6.2e-52
>prophage 6
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	1162356	1233055	2022507	transposase,integrase,tRNA	Bacillus_phage(40.0%)	56	1201693:1201752	1233017:1233882
WP_042518035.1|1162356_1164240_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_042518037.1|1164383_1165463_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035736266.1|1165449_1166343_+	FUSC family protein	NA	NA	NA	NA	NA
WP_042518038.1|1166344_1167253_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012279650.1|1167368_1168091_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_042518039.1|1168240_1169689_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
WP_042518041.1|1169689_1169920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518043.1|1169930_1173914_+	N-6 DNA methylase	NA	F2Y1N5	Organic_Lake_phycodnavirus	28.0	5.1e-13
WP_042518045.1|1173978_1175985_+	excinuclease ABC subunit UvrB	NA	B2CRJ8	Acidianus_filamentous_virus	36.0	9.8e-05
WP_004287977.1|1176018_1176816_+	NERD domain-containing protein	NA	NA	NA	NA	NA
WP_042518047.1|1176815_1177613_+	glutamate racemase	NA	NA	NA	NA	NA
WP_042518049.1|1177865_1179644_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_080775915.1|1179636_1180689_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_012279644.1|1180691_1180892_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_042518051.1|1180895_1181675_+	thiazole synthase	NA	NA	NA	NA	NA
WP_012279642.1|1181686_1183144_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_012279641.1|1183144_1183900_+	HesA/MoeB/ThiF family protein	NA	NA	NA	NA	NA
WP_042518054.1|1183989_1185267_+	MFS transporter	NA	NA	NA	NA	NA
WP_004287974.1|1185279_1186521_+	MFS transporter	NA	NA	NA	NA	NA
WP_042518057.1|1186623_1187814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042519220.1|1187880_1189068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518058.1|1189250_1190699_+	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_144402836.1|1190705_1191686_+	alpha-E domain-containing protein	NA	NA	NA	NA	NA
WP_042518063.1|1191708_1193460_+	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_042518067.1|1193466_1194003_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042519222.1|1193999_1195175_-	amidohydrolase	NA	NA	NA	NA	NA
WP_042518070.1|1195290_1196520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518071.1|1196620_1198006_+	exodeoxyribonuclease VII large subunit	NA	NA	NA	NA	NA
WP_042518073.1|1197989_1198193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518075.1|1198189_1199263_-	YdcF family protein	NA	NA	NA	NA	NA
WP_042518077.1|1199337_1200471_-	YdcF family protein	NA	NA	NA	NA	NA
1201693:1201752	attL	TGTTAGATTCTACCGAGTTGTTTACACATTTTGTTTAAAATATCTCTCTAGTTTCTCATA	NA	NA	NA	NA
WP_042516855.1|1201713_1202505_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_158409372.1|1202805_1203123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042516855.1|1203713_1204505_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080775916.1|1204558_1204723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518083.1|1204991_1206008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518085.1|1206023_1207970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518087.1|1207969_1210987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518088.1|1211008_1212409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518089.1|1212405_1213170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518091.1|1213159_1213570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518093.1|1213570_1214173_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_042518095.1|1214183_1214561_+	DUF4280 domain-containing protein	NA	NA	NA	NA	NA
WP_042518097.1|1214566_1214827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052471076.1|1214862_1215558_+	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	28.6	2.6e-05
WP_042518101.1|1215554_1216796_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_042517741.1|1218407_1219199_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_158409373.1|1220610_1220937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052471077.1|1222580_1222955_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_042518108.1|1223142_1225149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042516855.1|1225771_1226563_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080775917.1|1226622_1227108_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_042519230.1|1227371_1228076_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	25.7	3.3e-16
WP_042518110.1|1228115_1230959_-	chitinase	NA	NA	NA	NA	NA
WP_144402815.1|1231426_1232275_-	hypothetical protein	NA	W8CYF6	Bacillus_phage	34.3	8.6e-11
WP_042516855.1|1232263_1233055_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
1233017:1233882	attR	TATGAGAAACTAGAGAGATATTTTAAACAAAATGTGTAAACAACTCGGTAGAATCTAACATATAATTGTTGTTACACCAGCTAGGTATATTAGTGTTGTAGTTTCATTATTTCTTGTTGAAAGGAATGTTAAGCAACTATTCTCTAAAGATACTTATGTTATGACATGGGCAGGTTTAAGAGGAGGTGTATCAATTGCATTAGCATTATCTTTACCTGAGGATAGTTCAAGTATGTTTATATTTTTAGTCATATATGTATATGTGATAACTTCAATACTTATTAAAGGCATATCATTGAAAAGAATATTGAATTTTTGTTATAAGTAACGAAAGAGCATTTACAATAATCTTATGCAGGATTATCTATATCTATAAATTTAGCATCTAGAGTAAACTCTTGTTTAAGTAAATCAGCAATAGCCTTTACACCTTCTTTTTCTGTAGCGTGATGTCCTGCTGCGATATAGTTTATACCTAGTTCACGAGCAGCATGAGTTGTTCTTTCAGAGATTTCTCCTGATATGAAAGTGTCAGCTCCTGCTTGATATGCATATTCAATATAGTCTTGTGCTCCACCAGTACAAATAGCTACTTTTTTATTTTGCTGTTTTGTAGAAATTACGATTGGCTTTTTATCAAGTTTATTTTCTATTAAATTGCTAAAACTATCTAAATCTAAATCACAGTTACCTATCACTGAAATATCAGGCTTGGAACCTGTTTCAAAAAACTCTAGATTTGTAAGATTTAGTTTTTTTGCTAATAAGATATTATTACCTATTTTAGAATGTCCATCTAGAGGTAAGTGATAACCAAATAGATGTATACCATTTTTTATAAGTTTTGAGATACGCTCATACTTTAT	NA	NA	NA	NA
>prophage 7
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	1481840	1541879	2022507	plate,transposase,tRNA	Staphylococcus_phage(25.0%)	54	NA	NA
WP_042517741.1|1481840_1482632_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518482.1|1482702_1484277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042518484.1|1484295_1485501_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_042518487.1|1485521_1486154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042518489.1|1486198_1487683_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_042518491.1|1487682_1488207_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_042516855.1|1489601_1490393_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518493.1|1490376_1492335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052471078.1|1492671_1494051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042517741.1|1494330_1495122_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518495.1|1495373_1497824_-	family 20 glycosylhydrolase	NA	A0A076G5S5	Staphylococcus_phage	23.4	3.8e-11
WP_042518498.1|1497940_1499317_-	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_042518500.1|1499369_1500401_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_042518503.1|1500598_1501873_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_042518505.1|1501896_1503288_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.1	2.7e-46
WP_004287936.1|1503397_1504015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012279604.1|1504102_1504273_+	rubredoxin	NA	NA	NA	NA	NA
WP_042518507.1|1504281_1505154_+	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA	NA
WP_042518510.1|1505158_1506715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004287940.1|1506997_1508815_+	translational GTPase TypA	NA	NA	NA	NA	NA
WP_042518512.1|1508886_1509699_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_042518514.1|1509724_1511470_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_042518516.1|1511590_1512508_-	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_042518518.1|1512586_1513789_-	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA	NA
WP_052471079.1|1513781_1514342_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_042518523.1|1514334_1514640_-	RnfH family protein	NA	NA	NA	NA	NA
WP_012279615.1|1514639_1515071_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_012279616.1|1515145_1515619_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	44.3	1.3e-24
WP_042518525.1|1515620_1516391_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	47.5	4.2e-65
WP_042518528.1|1516714_1517719_-	ribonuclease I	NA	NA	NA	NA	NA
WP_042518530.1|1517759_1518383_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
WP_042518533.1|1518391_1519165_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
WP_042518535.1|1519158_1519884_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
WP_042518537.1|1519884_1520481_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_042518539.1|1520477_1521554_-	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_042518541.1|1521540_1522626_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	22.6	2.8e-14
WP_042518544.1|1522630_1523929_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_041268127.1|1523938_1524829_-	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_004287960.1|1524830_1525127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004287836.1|1526214_1526472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042518548.1|1526474_1527341_-	recombination-associated protein RdgC	NA	NA	NA	NA	NA
WP_042518550.1|1528011_1529004_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_042518552.1|1529134_1530061_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_042518554.1|1530144_1531197_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	36.8	1.3e-61
WP_042518556.1|1531183_1531852_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_035736024.1|1531838_1532153_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_042518558.1|1532259_1533870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518560.1|1533905_1535396_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_042518562.1|1535398_1536262_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_042518564.1|1536271_1537297_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_042518566.1|1537316_1537889_-	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	30.1	1.3e-15
WP_042518568.1|1537997_1539743_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	4.5e-54
WP_004287850.1|1539808_1540087_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_042517741.1|1541087_1541879_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	1600665	1655746	2022507	transposase,protease,tRNA	Tupanvirus(22.22%)	54	NA	NA
WP_042518633.1|1600665_1601856_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A2I2L594	Orpheovirus	26.0	3.3e-08
WP_042518635.1|1601968_1602871_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_042518636.1|1602874_1603624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004287605.1|1603812_1604364_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_004287604.1|1604371_1605739_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.2	3.0e-45
WP_042518638.1|1605828_1607280_+	MFS transporter	NA	NA	NA	NA	NA
WP_035735504.1|1607358_1608519_+	NAD-binding protein	NA	NA	NA	NA	NA
WP_012280895.1|1608614_1610015_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
WP_004287600.1|1610017_1610866_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_012280894.1|1610875_1611721_+	DsbC family protein	NA	NA	NA	NA	NA
WP_042518640.1|1611729_1612614_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	35.4	1.3e-41
WP_042518642.1|1612606_1613182_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_042518644.1|1613201_1614293_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_042518646.1|1614304_1614583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042518648.1|1614598_1615858_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_004287593.1|1615952_1616243_-	50S ribosomal protein L25	NA	NA	NA	NA	NA
WP_004287592.1|1616344_1617313_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	32.2	9.1e-41
WP_042518651.1|1617516_1618524_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_004287590.1|1618516_1619800_+	MFS transporter	NA	NA	NA	NA	NA
WP_042518653.1|1619809_1621090_-	MFS transporter	NA	NA	NA	NA	NA
WP_042517741.1|1621211_1622003_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518655.1|1622216_1623050_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_042518657.1|1623033_1624203_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_012280884.1|1624465_1624927_+	hypothetical protein	NA	M4QRU0	Micromonas_pusilla_virus	38.6	2.9e-21
WP_004287585.1|1624957_1625254_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042518660.1|1625257_1625842_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_042518662.1|1625845_1627264_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_035735477.1|1627279_1627933_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_042518664.1|1627943_1629137_-	MFS transporter	NA	NA	NA	NA	NA
WP_052471087.1|1629219_1630143_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042518666.1|1630218_1630734_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_042518668.1|1630872_1631619_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_035735468.1|1631636_1632296_-	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA	NA
WP_042518670.1|1632324_1633308_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_004287576.1|1633515_1634019_+	ferritin	NA	NA	NA	NA	NA
WP_042518671.1|1634022_1635495_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	22.8	6.1e-20
WP_042518674.1|1635642_1636848_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_042518676.1|1636968_1637613_+	glutaredoxin 2	NA	NA	NA	NA	NA
WP_042518678.1|1637614_1638250_+	RnfABCDGE type electron transport complex subunit B	NA	NA	NA	NA	NA
WP_004287572.1|1638242_1638881_+	endonuclease III	NA	NA	NA	NA	NA
WP_012280872.1|1638877_1639309_+	DUF1841 family protein	NA	NA	NA	NA	NA
WP_004287570.1|1639308_1640568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004287569.1|1640682_1641369_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	40.3	1.9e-29
WP_042518680.1|1641415_1644835_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_042518164.1|1644884_1645655_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518682.1|1645786_1646830_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_004287566.1|1646854_1647172_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_042518683.1|1647176_1648874_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.8	2.9e-58
WP_012280868.1|1649021_1650704_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_004287563.1|1650727_1652524_-	threonine synthase	NA	NA	NA	NA	NA
WP_012280867.1|1652672_1653266_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_004287561.1|1653262_1653748_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_004287560.1|1653750_1654677_-|protease	protease modulator HflC	protease	A0A2K9KZA2	Tupanvirus	22.7	2.6e-08
WP_042518686.1|1654678_1655746_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
>prophage 9
NZ_CP009444	Francisella philomiragia strain GA01-2801 chromosome, complete genome	2022507	1869609	1934188	2022507	transposase,protease,tRNA	Bodo_saltans_virus(33.33%)	52	NA	NA
WP_042518946.1|1869609_1871355_+|tRNA	arginine--tRNA ligase	tRNA	M1PAX3	Moumouvirus	28.6	7.8e-67
WP_042518948.1|1871439_1872891_+	MFS transporter	NA	NA	NA	NA	NA
WP_042518951.1|1872903_1873962_-	asparaginase	NA	NA	NA	NA	NA
WP_004288186.1|1874072_1874540_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_042518953.1|1874541_1875513_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_004288189.1|1875525_1875804_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_035735236.1|1875814_1876723_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_042518954.1|1876730_1877747_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	27.4	4.3e-17
WP_004288192.1|1877759_1878389_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_042519294.1|1878479_1878794_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_012279794.1|1878815_1879079_+	oxidative damage protection protein	NA	NA	NA	NA	NA
WP_042519296.1|1879173_1880940_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_042518956.1|1880964_1881921_-	glycosyltransferase family 2 protein	NA	B9UDL7	Salmonella_phage	39.5	2.3e-52
WP_042518958.1|1882021_1882828_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_004288198.1|1882834_1884043_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
WP_042518960.1|1884059_1885304_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_042518962.1|1885303_1886401_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_042518964.1|1886475_1888062_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	31.7	8.7e-65
WP_042518966.1|1888208_1889870_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	56.0	2.3e-177
WP_042516906.1|1890017_1890809_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080775922.1|1890824_1891511_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.7	3.8e-17
WP_042518968.1|1891582_1893424_-	ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	28.7	1.6e-46
WP_012279803.1|1893457_1894684_-	MFS transporter	NA	A0A2H4UVM2	Bodo_saltans_virus	20.2	2.1e-05
WP_042518970.1|1894771_1895815_-	FUSC family protein	NA	NA	NA	NA	NA
WP_042518972.1|1895902_1896646_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_042518973.1|1896642_1898013_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_035735221.1|1898172_1898799_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_035735219.1|1898788_1899502_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_042517741.1|1899594_1900386_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042516906.1|1902174_1902966_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518978.1|1903132_1904419_-	threonine synthase	NA	NA	NA	NA	NA
WP_042518980.1|1904431_1905385_-	homoserine kinase	NA	NA	NA	NA	NA
WP_042518982.1|1905387_1907808_-	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA	NA
WP_042518984.1|1907901_1909002_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_042518986.1|1909050_1909869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042518989.1|1909877_1911236_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_042519299.1|1911364_1911955_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_042518991.1|1912010_1913492_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_042518993.1|1913698_1914592_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_080775924.1|1914695_1915172_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042517741.1|1915235_1916027_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_042518995.1|1916156_1917593_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_042518997.1|1917808_1920076_-	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	38.3	2.0e-06
WP_042518999.1|1920198_1921656_-	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_035735199.1|1921665_1922937_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_042519002.1|1922972_1924607_-	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA	NA
WP_035735197.1|1924889_1926812_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_042519003.1|1926872_1930085_+	type I pullulanase	NA	NA	NA	NA	NA
WP_042519005.1|1930094_1930937_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_042519007.1|1930942_1931815_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_042519009.1|1931786_1933097_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA	NA
WP_042517741.1|1933396_1934188_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
