assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000833085.1_ASM83308v1	NZ_CP010088	Bacillus thuringiensis strain 97-27 chromosome, complete genome	1	1232881-1233136	1	CRISPRCasFinder	no		cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	Orphan	TTCTCATGCGGAAGGTAAACATACA	25	0	0	NA	NA	NA	3	3	Orphan	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	NA,NA|124aa|down_3|NZ_CP010088.1_1236226_1236598_-	NA|227aa|up_9|NZ_CP010088.1_1222970_1223651_-	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|229aa|up_8|NZ_CP010088.1_1223663_1224350_-	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|230aa|up_7|NZ_CP010088.1_1224346_1225036_-	pfam08242, Methyltransf_12, Methyltransferase domain	NA|367aa|up_6|NZ_CP010088.1_1225187_1226288_-	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|293aa|up_5|NZ_CP010088.1_1226453_1227332_+	pfam18573, BclA_C, BclA C-terminal domain	NA|282aa|up_4|NZ_CP010088.1_1227454_1228300_+	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|253aa|up_3|NZ_CP010088.1_1228436_1229195_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|312aa|up_2|NZ_CP010088.1_1229201_1230137_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|387aa|up_1|NZ_CP010088.1_1230279_1231440_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|247aa|up_0|NZ_CP010088.1_1231514_1232255_+	PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional	NA|298aa|down_0|NZ_CP010088.1_1233832_1234726_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|266aa|down_1|NZ_CP010088.1_1234741_1235539_-	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|213aa|down_2|NZ_CP010088.1_1235557_1236196_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|124aa|down_3|NZ_CP010088.1_1236226_1236598_-	NA	NA|193aa|down_4|NZ_CP010088.1_1236744_1237323_+	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|133aa|down_5|NZ_CP010088.1_1237503_1237902_+	cd14772, TrHb2_Bs-trHb-like_O, Truncated hemoglobins, group 2 (O); Bacillus subtilis TrHb like	NA|298aa|down_6|NZ_CP010088.1_1237901_1238795_+	pfam13743, Thioredoxin_5, Thioredoxin	NA|609aa|down_7|NZ_CP010088.1_1239317_1241144_-	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|415aa|down_8|NZ_CP010088.1_1241195_1242440_-	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|515aa|down_9|NZ_CP010088.1_1242521_1244066_-	PRK01642, cls, cardiolipin synthetase; Reviewed
GCF_000833085.1_ASM83308v1	NZ_CP010088	Bacillus thuringiensis strain 97-27 chromosome, complete genome	2	1396429-1396502	2	CRISPRCasFinder	no		cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	Orphan	TATTAAAACTAGCATAGTCTGGT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	NA|213aa|up_3|NZ_CP010088.1_1392997_1393636_-,NA|121aa|down_8|NZ_CP010088.1_1407698_1408061_-	NA|561aa|up_9|NZ_CP010088.1_1385886_1387569_-	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|497aa|up_8|NZ_CP010088.1_1387702_1389193_-	PRK00047, glpK, glycerol kinase GlpK	NA|274aa|up_7|NZ_CP010088.1_1389206_1390028_-	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|187aa|up_6|NZ_CP010088.1_1390256_1390817_-	pfam04309, G3P_antiterm, Glycerol-3-phosphate responsive antiterminator	NA|150aa|up_5|NZ_CP010088.1_1390914_1391364_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|358aa|up_4|NZ_CP010088.1_1391895_1392969_-	pfam13159, DUF3994, Domain of unknown function (DUF3994)	NA|213aa|up_3|NZ_CP010088.1_1392997_1393636_-	NA	NA|284aa|up_2|NZ_CP010088.1_1393907_1394759_-	pfam11155, DUF2935, Domain of unknown function (DUF2935)	NA|67aa|up_1|NZ_CP010088.1_1394934_1395135_-	pfam14147, Spore_YhaL, Sporulation protein YhaL	NA|291aa|up_0|NZ_CP010088.1_1395215_1396088_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|365aa|down_0|NZ_CP010088.1_1396620_1397715_-	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal	NA|326aa|down_1|NZ_CP010088.1_1397970_1398948_-	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	NA|315aa|down_2|NZ_CP010088.1_1398999_1399944_-	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	NA|476aa|down_3|NZ_CP010088.1_1400447_1401875_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|315aa|down_4|NZ_CP010088.1_1402169_1403114_-	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional	NA|975aa|down_5|NZ_CP010088.1_1403155_1406080_-	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|414aa|down_6|NZ_CP010088.1_1406076_1407318_-	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|62aa|down_7|NZ_CP010088.1_1407486_1407672_+	pfam14120, YhzD, YhzD-like protein	NA|121aa|down_8|NZ_CP010088.1_1407698_1408061_-	NA	NA|47aa|down_9|NZ_CP010088.1_1408214_1408355_+	pfam11121, DUF2639, Protein of unknown function (DUF2639)
GCF_000833085.1_ASM83308v1	NZ_CP010088	Bacillus thuringiensis strain 97-27 chromosome, complete genome	3	1447090-1447335	1	CRT	no		cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	Orphan	ACTACTCCTCCAACTACT	18	0	0	NA	NA	NA	5	5	Orphan	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	NA|110aa|up_9|NZ_CP010088.1_1436974_1437304_-,NA|130aa|up_6|NZ_CP010088.1_1439976_1440366_-,NA	NA|110aa|up_9|NZ_CP010088.1_1436974_1437304_-	NA	NA|161aa|up_8|NZ_CP010088.1_1437654_1438137_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|278aa|up_7|NZ_CP010088.1_1438500_1439334_+	pfam02517, Abi, CAAX protease self-immunity	NA|130aa|up_6|NZ_CP010088.1_1439976_1440366_-	NA	NA|184aa|up_5|NZ_CP010088.1_1440658_1441210_+	pfam11611, DUF4352, Domain of unknown function (DUF4352)	NA|117aa|up_4|NZ_CP010088.1_1441400_1441751_-	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown]	NA|584aa|up_3|NZ_CP010088.1_1441973_1443725_-	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|189aa|up_2|NZ_CP010088.1_1443903_1444470_+	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator	NA|333aa|up_1|NZ_CP010088.1_1444489_1445488_+	PRK14483, PRK14483, DhaKLM operon coactivator DhaQ; Provisional	NA|213aa|up_0|NZ_CP010088.1_1445584_1446223_-	pfam04892, VanZ, VanZ like family	NA|216aa|down_0|NZ_CP010088.1_1447563_1448211_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|124aa|down_1|NZ_CP010088.1_1448611_1448983_-	pfam03899, ATP-synt_I, ATP synthase I chain	NA|178aa|down_2|NZ_CP010088.1_1449005_1449539_-	TIGR00473, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|153aa|down_3|NZ_CP010088.1_1449558_1450017_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|480aa|down_4|NZ_CP010088.1_1450175_1451615_-	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|631aa|down_5|NZ_CP010088.1_1451710_1453603_-	PRK09824, PRK09824, PTS system beta-glucoside-specific transporter subunits IIABC; Provisional	NA|283aa|down_6|NZ_CP010088.1_1453749_1454598_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|89aa|down_7|NZ_CP010088.1_1455211_1455478_+	pfam14157, YmzC, YmzC-like protein	NA|333aa|down_8|NZ_CP010088.1_1455768_1456767_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|582aa|down_9|NZ_CP010088.1_1457131_1458877_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
GCF_000833085.1_ASM83308v1	NZ_CP010088	Bacillus thuringiensis strain 97-27 chromosome, complete genome	4	3027381-3027487	3	CRISPRCasFinder	no		cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	Orphan	TATATCGGCGATTTTTAAGATATATC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	NA,NA	NA|332aa|up_9|NZ_CP010088.1_3005993_3006989_-	pfam07885, Ion_trans_2, Ion channel	NA|227aa|up_8|NZ_CP010088.1_3007084_3007765_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|177aa|up_7|NZ_CP010088.1_3015243_3015774_+	TIGR02954, RNA_polymerase_ECF-type_sigma_factor, RNA polymerase sigma-70 factor, TIGR02954 family	NA|343aa|up_6|NZ_CP010088.1_3015766_3016795_+	pfam18705, DUF5643, Family of unknown function (DUF5643)	NA|315aa|up_5|NZ_CP010088.1_3017371_3018316_+	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|646aa|up_4|NZ_CP010088.1_3019306_3021244_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|377aa|up_3|NZ_CP010088.1_3021191_3022322_+	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|345aa|up_2|NZ_CP010088.1_3022340_3023375_+	TIGR02092, Glycogen_biosynthesis_protein_GlgD, glucose-1-phosphate adenylyltransferase, GlgD subunit	NA|477aa|up_1|NZ_CP010088.1_3023487_3024918_+	PRK00654, glgA, glycogen synthase GlgA	NA|803aa|up_0|NZ_CP010088.1_3024936_3027345_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|241aa|down_0|NZ_CP010088.1_3027771_3028494_-	cd00519, Lipase_3, Lipase (class 3)	NA|261aa|down_1|NZ_CP010088.1_3028658_3029441_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|67aa|down_2|NZ_CP010088.1_3029767_3029968_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|244aa|down_3|NZ_CP010088.1_3030012_3030744_-	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|318aa|down_4|NZ_CP010088.1_3030853_3031807_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|465aa|down_5|NZ_CP010088.1_3032001_3033396_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|585aa|down_6|NZ_CP010088.1_3033392_3035147_+	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|271aa|down_7|NZ_CP010088.1_3035143_3035956_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|273aa|down_8|NZ_CP010088.1_3036025_3036844_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|483aa|down_9|NZ_CP010088.1_3036916_3038365_+	PRK03640, PRK03640, o-succinylbenzoate--CoA ligase
GCF_000833085.1_ASM83308v1	NZ_CP010088	Bacillus thuringiensis strain 97-27 chromosome, complete genome	5	4128406-4128861	2	CRT	no	cas14j	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	Unclear	TGAGGTCCAGTNGCNCCN	18	5	33	4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128520-4128546|4128565-4128591|4128565-4128591|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128610-4128636|4128691-4128717|4128691-4128717|4128691-4128717|4128691-4128717|4128781-4128798|4128781-4128798|4128781-4128798	NZ_CP010088.1_4128304-4128330|NZ_CP010088.1_1013778-1013752|NZ_CP010088.1_4127134-4127160|NZ_CP010088.1_4127710-4127736|NZ_CP010088.1_4128214-4128240|NZ_CP010088.1_1013247-1013221|NZ_CP010088.1_1013400-1013374|NZ_CP010088.1_1013634-1013608|NZ_CP010088.1_4127224-4127250|NZ_CP010088.1_4127350-4127376|NZ_CP010088.1_4127395-4127421|NZ_CP010088.1_4127530-4127556|NZ_CP010088.1_4127179-4127205|NZ_CP010088.1_4128259-4128285|NZ_CP010088.1_4128304-4128330|NZ_CP010088.1_1013778-1013752|NZ_CP010088.1_4127134-4127160|NZ_CP010088.1_4127710-4127736|NZ_CP010088.1_4128214-4128240|NZ_CP010088.1_1013247-1013221|NZ_CP010088.1_1013400-1013374|NZ_CP010088.1_1013634-1013608|NZ_CP010088.1_4127224-4127250|NZ_CP010088.1_4127350-4127376|NZ_CP010088.1_4127395-4127421|NZ_CP010088.1_4127530-4127556|NZ_CP010088.1_4127179-4127205|NZ_CP010088.1_4128259-4128285|NZ_CP010088.1_4128124-4128150|NZ_CP010088.1_4128169-4128195|NZ_CP010088.1_4127188-4127205|NZ_CP010088.1_4127269-4127286|NZ_CP010088.1_4128268-4128285	NA	10	10	TypeV	cas3,csa3,cas14k,DinG,WYL,Cas14u_CAS-V,DEDDh,c2c9_V-U4,cas14j	NA|114aa|up_9|NZ_CP010088.1_4117172_4117514_+,NA|82aa|up_2|NZ_CP010088.1_4124684_4124930_-,NA	NA|114aa|up_9|NZ_CP010088.1_4117172_4117514_+	NA	NA|181aa|up_8|NZ_CP010088.1_4117825_4118368_+	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|388aa|up_7|NZ_CP010088.1_4118484_4119648_+	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|251aa|up_6|NZ_CP010088.1_4119806_4120559_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|304aa|up_5|NZ_CP010088.1_4120555_4121467_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|620aa|up_4|NZ_CP010088.1_4121481_4123341_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|311aa|up_3|NZ_CP010088.1_4123689_4124622_+	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|82aa|up_2|NZ_CP010088.1_4124684_4124930_-	NA	NA|318aa|up_1|NZ_CP010088.1_4125111_4126065_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|75aa|up_0|NZ_CP010088.1_4126086_4126311_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|322aa|down_0|NZ_CP010088.1_4129480_4130446_-	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|319aa|down_1|NZ_CP010088.1_4130559_4131516_+	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|208aa|down_2|NZ_CP010088.1_4131785_4132409_-	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|425aa|down_3|NZ_CP010088.1_4132501_4133776_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|424aa|down_4|NZ_CP010088.1_4133768_4135040_+	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|130aa|down_5|NZ_CP010088.1_4135214_4135604_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|445aa|down_6|NZ_CP010088.1_4135652_4136987_+	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|108aa|down_7|NZ_CP010088.1_4137360_4137684_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|181aa|down_8|NZ_CP010088.1_4137676_4138219_+	pfam08006, DUF1700, Protein of unknown function (DUF1700)	NA|268aa|down_9|NZ_CP010088.1_4138219_4139023_+	pfam13349, DUF4097, Putative adhesin
