assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000832745.1_ASM83274v1	NZ_CP009697	Bacillus anthracis strain RA3 chromosome, complete genome	1	713121-713318	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG	Orphan	TTTCGGAATGAACATTCATTCCT	23	0	0	NA	NA	NA	3	3	Orphan	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG,RT,c2c4_V-U1	NA,NA	NA|182aa|up_9|NZ_CP009697.1_699043_699589_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|234aa|up_8|NZ_CP009697.1_699604_700306_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|228aa|up_7|NZ_CP009697.1_700322_701006_-	cd06561, AlkD_like, A new structural DNA glycosylase	NA|87aa|up_6|NZ_CP009697.1_701371_701632_-	PRK10811, rne, ribonuclease E; Reviewed	NA|276aa|up_5|NZ_CP009697.1_701849_702677_+	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|221aa|up_4|NZ_CP009697.1_702836_703499_+	pfam12952, DUF3841, Domain of unknown function (DUF3841)	NA|224aa|up_3|NZ_CP009697.1_703609_704281_+	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family	NA|658aa|up_2|NZ_CP009697.1_704340_706314_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|542aa|up_1|NZ_CP009697.1_706830_708456_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|283aa|up_0|NZ_CP009697.1_708833_709682_-	PRK06761, PRK06761, hypothetical protein; Provisional	NA|189aa|down_0|NZ_CP009697.1_713338_713905_-	pfam16295, TetR_C_10, Tetracycline repressor, C-terminal all-alpha domain	NA|386aa|down_1|NZ_CP009697.1_714174_715332_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|430aa|down_2|NZ_CP009697.1_715517_716807_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|367aa|down_3|NZ_CP009697.1_716823_717924_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|367aa|down_4|NZ_CP009697.1_717916_719017_-	PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated	NA|391aa|down_5|NZ_CP009697.1_719035_720208_-	PRK12463, PRK12463, chorismate synthase; Reviewed	NA|359aa|down_6|NZ_CP009697.1_720492_721569_-	PRK12595, PRK12595, bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed	NA|146aa|down_7|NZ_CP009697.1_725771_726209_+	pfam10710, DUF2512, Protein of unknown function (DUF2512)	NA|177aa|down_8|NZ_CP009697.1_726357_726888_-	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|178aa|down_9|NZ_CP009697.1_726904_727438_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain
GCF_000832745.1_ASM83274v1	NZ_CP009697	Bacillus anthracis strain RA3 chromosome, complete genome	2	1259479-1259581	2	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG	Type I-A	AAGTTTAGGTTTCTTTTGAGAATGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG,RT,c2c4_V-U1	NA|210aa|up_8|NZ_CP009697.1_1247537_1248167_+,NA|77aa|up_4|NZ_CP009697.1_1254138_1254369_+,NA|218aa|down_0|NZ_CP009697.1_1260219_1260873_-	NA|634aa|up_9|NZ_CP009697.1_1245023_1246925_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|210aa|up_8|NZ_CP009697.1_1247537_1248167_+	NA	NA|264aa|up_7|NZ_CP009697.1_1250017_1250809_+	pfam00797, Acetyltransf_2, N-acetyltransferase	NA|596aa|up_6|NZ_CP009697.1_1250925_1252713_+	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|378aa|up_5|NZ_CP009697.1_1252748_1253882_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|77aa|up_4|NZ_CP009697.1_1254138_1254369_+	NA	NA|284aa|up_3|NZ_CP009697.1_1255797_1256649_+	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|170aa|up_2|NZ_CP009697.1_1256641_1257151_+	pfam13079, DUF3916, Protein of unknown function (DUF3916)	NA|226aa|up_1|NZ_CP009697.1_1257244_1257922_+	cd06259, YdcF-like, YdcF-like	NA|315aa|up_0|NZ_CP009697.1_1257971_1258916_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|218aa|down_0|NZ_CP009697.1_1260219_1260873_-	NA	NA|60aa|down_1|NZ_CP009697.1_1260977_1261157_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|540aa|down_2|NZ_CP009697.1_1261488_1263108_-	pfam01494, FAD_binding_3, FAD binding domain	csa3|115aa|down_3|NZ_CP009697.1_1263585_1263930_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|333aa|down_4|NZ_CP009697.1_1263948_1264947_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|489aa|down_5|NZ_CP009697.1_1265125_1266592_+	PRK00029, PRK00029, YdiU family protein	NA|64aa|down_6|NZ_CP009697.1_1267938_1268130_+	TIGR04429, hypothetical_protein_bmyco0001_31490, Phr family secreted Rap phosphatase inhibitor	NA|200aa|down_7|NZ_CP009697.1_1268203_1268803_-	pfam04299, FMN_bind_2, Putative FMN-binding domain	NA|116aa|down_8|NZ_CP009697.1_1269487_1269835_-	pfam14079, DUF4260, Domain of unknown function (DUF4260)	NA|323aa|down_9|NZ_CP009697.1_1269847_1270816_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]
GCF_000832745.1_ASM83274v1	NZ_CP009697	Bacillus anthracis strain RA3 chromosome, complete genome	3	4270785-4270878	3	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG	Orphan	GGTTTAAATACGTTAAATAGCAAAA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG,RT,c2c4_V-U1	NA|118aa|up_4|NZ_CP009697.1_4265333_4265687_+,NA|280aa|up_3|NZ_CP009697.1_4265683_4266523_-,NA|72aa|down_0|NZ_CP009697.1_4272808_4273024_+,NA|143aa|down_8|NZ_CP009697.1_4277969_4278398_+	NA|349aa|up_9|NZ_CP009697.1_4257745_4258792_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|312aa|up_8|NZ_CP009697.1_4258806_4259742_+	PRK12435, PRK12435, ferrochelatase; Provisional	NA|474aa|up_7|NZ_CP009697.1_4259761_4261183_+	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|451aa|up_6|NZ_CP009697.1_4261222_4262575_-	pfam13218, DUF4026, Protein of unknown function (DUF4026)	NA|789aa|up_5|NZ_CP009697.1_4262815_4265182_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|118aa|up_4|NZ_CP009697.1_4265333_4265687_+	NA	NA|280aa|up_3|NZ_CP009697.1_4265683_4266523_-	NA	NA|133aa|up_2|NZ_CP009697.1_4266752_4267151_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|633aa|up_1|NZ_CP009697.1_4267156_4269055_+	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|191aa|up_0|NZ_CP009697.1_4269268_4269841_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|72aa|down_0|NZ_CP009697.1_4272808_4273024_+	NA	NA|102aa|down_1|NZ_CP009697.1_4273060_4273366_+	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|118aa|down_2|NZ_CP009697.1_4273392_4273746_-	pfam14470, bPH_3, Bacterial PH domain	NA|168aa|down_3|NZ_CP009697.1_4273879_4274383_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|326aa|down_4|NZ_CP009697.1_4274620_4275598_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|43aa|down_5|NZ_CP009697.1_4275673_4275802_-	pfam14149, YhfH, YhfH-like protein	NA|245aa|down_6|NZ_CP009697.1_4275981_4276716_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|330aa|down_7|NZ_CP009697.1_4276725_4277715_+	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|143aa|down_8|NZ_CP009697.1_4277969_4278398_+	NA	NA|511aa|down_9|NZ_CP009697.1_4278559_4280092_+	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated
GCF_000832745.1_ASM83274v1	NZ_CP009697	Bacillus anthracis strain RA3 chromosome, complete genome	4	4383327-4383435	4	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG	Orphan	TGTATGATTACCTTCCGCATGAGAA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG,RT,c2c4_V-U1	NA|120aa|up_3|NZ_CP009697.1_4379876_4380236_+,NA	NA|515aa|up_9|NZ_CP009697.1_4372409_4373954_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|415aa|up_8|NZ_CP009697.1_4374035_4375280_+	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|609aa|up_7|NZ_CP009697.1_4375330_4377157_+	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|298aa|up_6|NZ_CP009697.1_4377679_4378573_-	pfam13743, Thioredoxin_5, Thioredoxin	NA|133aa|up_5|NZ_CP009697.1_4378572_4378971_-	cd14772, TrHb2_Bs-trHb-like_O, Truncated hemoglobins, group 2 (O); Bacillus subtilis TrHb like	NA|193aa|up_4|NZ_CP009697.1_4379151_4379730_-	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|120aa|up_3|NZ_CP009697.1_4379876_4380236_+	NA	NA|213aa|up_2|NZ_CP009697.1_4380266_4380905_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|266aa|up_1|NZ_CP009697.1_4380923_4381721_+	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|298aa|up_0|NZ_CP009697.1_4381736_4382630_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|247aa|down_0|NZ_CP009697.1_4384207_4384948_-	PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional	NA|312aa|down_1|NZ_CP009697.1_4386324_4387260_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|256aa|down_2|NZ_CP009697.1_4387266_4388034_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|282aa|down_3|NZ_CP009697.1_4388161_4389007_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|254aa|down_4|NZ_CP009697.1_4389129_4389891_-	pfam18573, BclA_C, BclA C-terminal domain	NA|230aa|down_5|NZ_CP009697.1_4391309_4391999_+	pfam08242, Methyltransf_12, Methyltransferase domain	NA|229aa|down_6|NZ_CP009697.1_4391995_4392682_+	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|246aa|down_7|NZ_CP009697.1_4393388_4394126_+	cd02538, G1P_TT_short, G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase	NA|182aa|down_8|NZ_CP009697.1_4394134_4394680_+	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production	NA|285aa|down_9|NZ_CP009697.1_4395675_4396530_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain
GCF_000832745.1_ASM83274v1	NZ_CP009695	Bacillus anthracis strain RA3 plasmid pXO2, complete sequence	1	69327-69648	1	CRT	no			Orphan	TTTTACACATTTACACATTTACACATTTACACATGTGTAAATT	43	0	0	NA	NA	NA	3	3	Orphan	csa3,cas3,WYL,DEDDh,cas14j,c2c9_V-U4,cas14k,DinG,RT,c2c4_V-U1	NA|110aa|up_4|NZ_CP009695.1_62987_63317_+,NA|78aa|up_2|NZ_CP009695.1_67597_67831_-,NA|129aa|up_1|NZ_CP009695.1_68053_68440_-,NA|255aa|down_1|NZ_CP009695.1_71940_72705_+,NA|406aa|down_2|NZ_CP009695.1_73217_74435_+,NA|177aa|down_4|NZ_CP009695.1_76273_76804_+,NA|63aa|down_5|NZ_CP009695.1_76793_76982_+,NA|79aa|down_7|NZ_CP009695.1_77951_78188_+,NA|110aa|down_8|NZ_CP009695.1_78238_78568_+,NA|923aa|down_9|NZ_CP009695.1_78693_81462_+	NA|145aa|up_9|NZ_CP009695.1_56826_57261_+	cd03385, PAP2_BcrC_like, PAP2_like proteins, BcrC_like subfamily	NA|197aa|up_8|NZ_CP009695.1_59236_59827_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|155aa|up_7|NZ_CP009695.1_60203_60668_-	pfam04463, DUF523, Protein of unknown function (DUF523)	NA|222aa|up_6|NZ_CP009695.1_61378_62044_+	pfam02517, Abi, CAAX protease self-immunity	NA|104aa|up_5|NZ_CP009695.1_62092_62404_+	PRK12856, PRK12856, hypothetical protein; Provisional	NA|110aa|up_4|NZ_CP009695.1_62987_63317_+	NA	NA|532aa|up_3|NZ_CP009695.1_64794_66390_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|78aa|up_2|NZ_CP009695.1_67597_67831_-	NA	NA|129aa|up_1|NZ_CP009695.1_68053_68440_-	NA	NA|289aa|up_0|NZ_CP009695.1_68432_69299_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|513aa|down_0|NZ_CP009695.1_70199_71738_+	pfam08708, PriCT_1, Primase C terminal 1 (PriCT-1)	NA|255aa|down_1|NZ_CP009695.1_71940_72705_+	NA	NA|406aa|down_2|NZ_CP009695.1_73217_74435_+	NA	NA|101aa|down_3|NZ_CP009695.1_75464_75767_+	pfam17362, pXO2-34, Family of unknown function	NA|177aa|down_4|NZ_CP009695.1_76273_76804_+	NA	NA|63aa|down_5|NZ_CP009695.1_76793_76982_+	NA	NA|163aa|down_6|NZ_CP009695.1_77078_77567_+	pfam17631, DUF5512, Family of unknown function (DUF5512)	NA|79aa|down_7|NZ_CP009695.1_77951_78188_+	NA	NA|110aa|down_8|NZ_CP009695.1_78238_78568_+	NA	NA|923aa|down_9|NZ_CP009695.1_78693_81462_+	NA
