assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000831485.1_ASM83148v1	NZ_CP010783	Streptococcus iniae strain YSFST01-82 chromosome, complete genome	1	830531-831358	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,DinG,csa3	Type II-B,Type II-C,Type II-A	GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC,GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC,GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	10,12,12	12	TypeII-B,TypeII-C,TypeII-A	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,DinG,csa3	NA|72aa|up_4|NZ_CP010783.1_824028_824244_+,NA|84aa|down_1|NZ_CP010783.1_831925_832177_-,NA|206aa|down_9|NZ_CP010783.1_839689_840307_+	NA|219aa|up_9|NZ_CP010783.1_819978_820635_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|377aa|up_8|NZ_CP010783.1_820677_821808_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|245aa|up_7|NZ_CP010783.1_821825_822560_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|256aa|up_6|NZ_CP010783.1_822569_823337_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|214aa|up_5|NZ_CP010783.1_823333_823975_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|72aa|up_4|NZ_CP010783.1_824028_824244_+	NA	cas9|1369aa|up_3|NZ_CP010783.1_824459_828566_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|289aa|up_2|NZ_CP010783.1_828565_829432_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|115aa|up_1|NZ_CP010783.1_829428_829773_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|NZ_CP010783.1_829762_830425_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|141aa|down_0|NZ_CP010783.1_831454_831877_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|84aa|down_1|NZ_CP010783.1_831925_832177_-	NA	NA|611aa|down_2|NZ_CP010783.1_832556_834389_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|148aa|down_3|NZ_CP010783.1_834499_834943_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|219aa|down_4|NZ_CP010783.1_834945_835602_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|NZ_CP010783.1_835621_836086_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|375aa|down_6|NZ_CP010783.1_836325_837450_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|282aa|down_7|NZ_CP010783.1_837532_838378_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|340aa|down_8|NZ_CP010783.1_838486_839506_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|206aa|down_9|NZ_CP010783.1_839689_840307_+	NA
GCF_000831485.1_ASM83148v1	NZ_CP010783	Streptococcus iniae strain YSFST01-82 chromosome, complete genome	2	1190460-1190601	2	CRISPRCasFinder	no		cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,DinG,csa3	Orphan	GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,DinG,csa3	NA,NA	NA|437aa|up_9|NZ_CP010783.1_1179976_1181287_-	pfam09913, DUF2142, Predicted membrane protein (DUF2142)	NA|327aa|up_8|NZ_CP010783.1_1181322_1182303_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|409aa|up_7|NZ_CP010783.1_1182295_1183522_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|422aa|up_6|NZ_CP010783.1_1183548_1184814_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|389aa|up_5|NZ_CP010783.1_1184833_1186000_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|269aa|up_4|NZ_CP010783.1_1185999_1186806_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|311aa|up_3|NZ_CP010783.1_1186808_1187741_-	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|385aa|up_2|NZ_CP010783.1_1187730_1188885_-	cd04955, GT4-like, glycosyltransferase family 4 proteins	NA|285aa|up_1|NZ_CP010783.1_1189002_1189857_-	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|113aa|up_0|NZ_CP010783.1_1189950_1190289_-	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|370aa|down_0|NZ_CP010783.1_1190664_1191774_-	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|126aa|down_1|NZ_CP010783.1_1193721_1194099_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|59aa|down_2|NZ_CP010783.1_1194366_1194543_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|1216aa|down_3|NZ_CP010783.1_1194676_1198324_-	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|1079aa|down_4|NZ_CP010783.1_1198320_1201557_-	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B	NA|308aa|down_5|NZ_CP010783.1_1201720_1202644_+	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase	NA|224aa|down_6|NZ_CP010783.1_1202674_1203346_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|357aa|down_7|NZ_CP010783.1_1203354_1204425_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|127aa|down_8|NZ_CP010783.1_1204427_1204808_-	pfam02566, OsmC, OsmC-like protein	NA|802aa|down_9|NZ_CP010783.1_1204880_1207286_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed
