The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP014696	Clostridium botulinum strain 111	3901300	1729054	1737253	3901300	protease	uncultured_phage(33.33%)	9	NA	NA
WP_045539718.1|1729054_1729999_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	31.6	4.2e-14
WP_045539719.1|1730622_1731618_+	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA	NA
WP_003358645.1|1731734_1732496_+	2-hydroxyglutaryl-CoA dehydratase	NA	NA	NA	NA	NA
WP_011949100.1|1732513_1732945_+	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	32.4	4.0e-12
WP_045539721.1|1732946_1733612_+	putative 7-carboxy-7-deazaguanine synthase QueE	NA	S4TZT1	uncultured_phage	44.1	1.7e-38
WP_024933670.1|1733615_1734206_+	GTP cyclohydrolase I FolE	NA	S4U0J3	uncultured_phage	52.8	9.2e-44
WP_045539723.1|1734389_1735049_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.7	3.0e-59
WP_045539724.1|1735342_1736161_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_045539725.1|1736308_1737253_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.5	7.6e-16
>prophage 2
NZ_AP014696	Clostridium botulinum strain 111	3901300	3012273	3021742	3901300		Synechococcus_phage(42.86%)	7	NA	NA
WP_045540661.1|3012273_3013773_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.6	5.5e-69
WP_045540662.1|3013986_3014604_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.6	3.4e-25
WP_012099415.1|3014731_3015727_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	43.7	9.9e-67
WP_021135262.1|3015787_3017236_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	9.4e-58
WP_012047943.1|3017327_3018032_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.1	6.0e-42
WP_045540664.1|3018031_3018511_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	49.4	2.8e-27
WP_045540666.1|3019186_3021742_-	selenium-dependent xanthine dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	32.4	1.3e-09
>prophage 3
NZ_AP014696	Clostridium botulinum strain 111	3901300	3158294	3165778	3901300		Bacillus_phage(33.33%)	8	NA	NA
WP_045540751.1|3158294_3158840_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXN2	Bacillus_phage	35.5	7.0e-14
WP_045540756.1|3158857_3159496_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_045540757.1|3159507_3162135_-	DNA polymerase I	NA	F8WQ35	Bacillus_phage	35.2	9.4e-64
WP_045540759.1|3162151_3163276_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	30.6	1.4e-32
WP_045540761.1|3163416_3164187_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4J8A3	uncultured_Caudovirales_phage	62.9	6.7e-87
WP_003403512.1|3164333_3164528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003358009.1|3164546_3164801_-	hemolysin XhlA family protein	NA	A0A0A7RTX0	Clostridium_phage	70.9	4.8e-26
WP_139016164.1|3164956_3165778_-	LamG domain-containing protein	NA	A0A0A7RU33	Clostridium_phage	47.0	8.6e-24
>prophage 4
NZ_AP014696	Clostridium botulinum strain 111	3901300	3171730	3195013	3901300		Clostridium_phage(81.82%)	27	NA	NA
WP_045540769.1|3171730_3172519_-	hypothetical protein	NA	A0A218M352	Acidovorax_phage	34.1	2.3e-05
WP_045540770.1|3172607_3173693_-	hypothetical protein	NA	A0A0A7RU66	Clostridium_phage	69.5	1.5e-140
WP_045540772.1|3173704_3174703_-	hypothetical protein	NA	A0A0A7RW91	Clostridium_phage	72.3	5.2e-140
WP_003360052.1|3174714_3174969_-	hypothetical protein	NA	A0A0A7S0T0	Clostridium_phage	81.0	1.1e-33
WP_045540774.1|3174974_3176870_-	hypothetical protein	NA	A0A0A7RU09	Clostridium_phage	52.3	5.3e-117
WP_024932980.1|3176884_3178123_-	hypothetical protein	NA	A0A0A7RU28	Clostridium_phage	81.3	3.4e-197
WP_045540776.1|3178145_3179126_-	hypothetical protein	NA	A0A0A7RU61	Clostridium_phage	61.9	7.2e-110
WP_024932982.1|3179127_3180477_-	caspase family protein	NA	A0A0A7RW86	Clostridium_phage	74.1	3.5e-75
WP_024932983.1|3180491_3180833_-	hypothetical protein	NA	A0A0A7S0S4	Clostridium_phage	54.3	1.0e-15
WP_024932984.1|3180845_3181931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024932985.1|3181917_3182352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024932986.1|3182364_3183768_-	membrane protein	NA	A0A0A7RU22	Clostridium_phage	42.4	1.2e-04
WP_003393374.1|3183843_3184011_-	hypothetical protein	NA	A0A0A7RW80	Clostridium_phage	68.5	1.1e-15
WP_012048055.1|3184045_3184462_-	hypothetical protein	NA	A0A0A7S0S0	Clostridium_phage	70.5	7.6e-45
WP_012048056.1|3184477_3185365_-	hypothetical protein	NA	A0A0A7RTZ9	Clostridium_phage	75.3	3.1e-120
WP_045540777.1|3185369_3185789_-	hypothetical protein	NA	A0A0A7RU17	Clostridium_phage	72.7	1.0e-57
WP_012048058.1|3185794_3186142_-	hypothetical protein	NA	A0A0A7RU51	Clostridium_phage	58.9	1.1e-33
WP_012048059.1|3186146_3186512_-	hypothetical protein	NA	A0A0A7RW73	Clostridium_phage	56.2	5.0e-32
WP_012048060.1|3186511_3186796_-	hypothetical protein	NA	A0A0A7S0R4	Clostridium_phage	60.2	1.0e-24
WP_012048061.1|3187482_3188004_-	hypothetical protein	NA	A0A0A7RVS1	Clostridium_phage	49.4	3.1e-35
WP_012099498.1|3188484_3189285_-	ATP-binding protein	NA	A0A2K9V3L7	Faecalibacterium_phage	34.8	9.9e-33
WP_045540779.1|3189274_3190180_-	phage replisome organizer N-terminal domain-containing protein	NA	A8ASN4	Listeria_phage	39.1	2.5e-40
WP_003384849.1|3190273_3190486_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_045540780.1|3190547_3190757_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012048067.1|3190948_3191359_+	helix-turn-helix transcriptional regulator	NA	A0A0A7RUJ5	Clostridium_phage	56.2	1.0e-09
WP_003403583.1|3191660_3191810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045540782.1|3192661_3195013_-	hypothetical protein	NA	A0A2H4J056	uncultured_Caudovirales_phage	40.3	1.1e-153
>prophage 5
NZ_AP014696	Clostridium botulinum strain 111	3901300	3206803	3250793	3901300	terminase,portal,tail,integrase,capsid	Clostridium_phage(43.24%)	68	3215706:3215722	3255775:3255791
WP_045541245.1|3206803_3207574_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4J8A3	uncultured_Caudovirales_phage	66.4	8.4e-90
WP_045540796.1|3207618_3207813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540798.1|3207816_3208095_-	hypothetical protein	NA	A0A2H4J1Q4	uncultured_Caudovirales_phage	53.8	1.1e-20
WP_080283192.1|3208264_3208462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033066332.1|3208540_3208756_-	hypothetical protein	NA	A0A2H4JGH3	uncultured_Caudovirales_phage	67.4	1.6e-09
WP_033066333.1|3208757_3209108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540799.1|3209120_3210506_-	methyl-accepting chemotaxis protein	NA	E2ELJ8	Clostridium_phage	46.5	3.4e-65
WP_045540801.1|3210505_3211600_-	siphovirus ReqiPepy6 Gp37-like family protein	NA	E2ELJ7	Clostridium_phage	48.3	3.1e-93
WP_045540803.1|3211603_3212473_-|tail	phage tail family protein	tail	E2ELJ6	Clostridium_phage	54.1	5.6e-82
3215706:3215722	attL	TTTTATTTTATTAATAG	NA	NA	NA	NA
WP_052470462.1|3217269_3218070_-	hypothetical protein	NA	A0A0C5K996	Enterococcus_phage	47.4	1.2e-43
WP_052470463.1|3219544_3220174_-	DUF4878 domain-containing protein	NA	NA	NA	NA	NA
WP_164468603.1|3220249_3220426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540806.1|3220415_3220835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540807.1|3220892_3221519_-	hypothetical protein	NA	A0A1U9WR69	Streptococcus_virus	44.6	1.9e-39
WP_045540809.1|3221522_3221861_-	hypothetical protein	NA	A0A0A8WEH0	Clostridium_phage	29.9	1.1e-06
WP_045540811.1|3221862_3222237_-	hypothetical protein	NA	E7DNB1	Pneumococcus_phage	32.7	1.4e-13
WP_045540813.1|3222229_3222598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540815.1|3222594_3222903_-	hypothetical protein	NA	A0A2H4J040	uncultured_Caudovirales_phage	60.2	1.8e-30
WP_045540816.1|3222905_3223112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024931284.1|3223168_3224221_-|capsid	major capsid protein	capsid	D9ZND6	Clostridium_phage	51.4	4.4e-89
WP_024931285.1|3224234_3224627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540820.1|3224647_3225262_-	phage scaffolding protein	NA	A0A0K2CP96	Brevibacillus_phage	30.7	2.7e-14
WP_154232144.1|3225412_3225559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012721333.1|3225665_3225833_+	YjzC family protein	NA	A0A0A7RTS6	Clostridium_phage	89.1	1.6e-22
WP_045540822.1|3225990_3226287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540823.1|3226296_3227262_-	hypothetical protein	NA	A0A2H4J048	uncultured_Caudovirales_phage	48.1	3.6e-82
WP_045540824.1|3227261_3228767_-|portal	phage portal protein	portal	D9ZNC8	Clostridium_phage	52.5	1.3e-139
WP_045540826.1|3228766_3230119_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0A7S0Q5	Clostridium_phage	80.2	4.3e-214
WP_045540827.1|3230111_3231029_-|terminase	terminase small subunit	terminase	A0A0A7RTY1	Clostridium_phage	79.7	1.3e-132
WP_045540830.1|3231095_3231581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052470464.1|3231598_3232171_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_045540831.1|3232438_3232636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540833.1|3232718_3232937_-	hypothetical protein	NA	A0A0A7RTM8	Clostridium_phage	73.0	2.9e-11
WP_045540835.1|3233030_3234116_-	Ig domain-containing protein	NA	A0A1D6Z291	Staphylococcus_phage	40.8	9.3e-10
WP_045540836.1|3234443_3234851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540837.1|3234861_3235053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540838.1|3235054_3235420_-	hypothetical protein	NA	A0A219VG58	Leuconostoc_phage	38.9	1.8e-10
WP_045540839.1|3235416_3235608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045541249.1|3235695_3236022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540841.1|3236036_3237032_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2R2ZGM9	Clostridioides_phage	25.4	1.2e-08
WP_045540843.1|3237112_3237469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540845.1|3237515_3238499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154232145.1|3238597_3238759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540846.1|3238791_3239139_-	hypothetical protein	NA	A0A0A7RTL9	Clostridium_phage	57.9	6.4e-29
WP_052470465.1|3239141_3239546_-	DUF1064 domain-containing protein	NA	D0R7I5	Paenibacillus_phage	42.1	6.3e-12
WP_162835519.1|3239542_3239707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540848.1|3239722_3240085_-	hypothetical protein	NA	A0A0A7RVR5	Clostridium_phage	43.2	1.3e-19
WP_045540850.1|3240149_3240863_-	hypothetical protein	NA	A0A0A7RWW3	Clostridium_phage	63.6	1.2e-74
WP_045540852.1|3240889_3241288_-	hypothetical protein	NA	A0A0A7RUF3	Clostridium_phage	62.1	1.1e-37
WP_045540853.1|3241380_3241578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080316658.1|3241633_3241810_-	DUF3797 domain-containing protein	NA	A0A0H3UYX0	Geobacillus_virus	56.6	1.6e-12
WP_052470466.1|3241831_3242212_-	nucleotide pyrophosphohydrolase	NA	R4T830	Halovirus	45.9	2.5e-10
WP_012047831.1|3242211_3242451_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A0K2CZ86	Paenibacillus_phage	55.1	6.6e-17
WP_041350637.1|3242453_3242759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540856.1|3242788_3243784_-	sigma-70 family RNA polymerase sigma factor	NA	A0A0A0RV91	Bacillus_phage	23.0	7.5e-06
WP_045541251.1|3243796_3244030_-	hypothetical protein	NA	A0A0A7RTQ4	Clostridium_phage	42.2	1.8e-11
WP_045540858.1|3244047_3244866_-	ATP-binding protein	NA	Q0H276	Geobacillus_phage	40.1	5.9e-33
WP_080316660.1|3244750_3245557_-	DnaD domain protein	NA	J9QEC5	Clostridium_phage	35.4	6.7e-29
WP_045540859.1|3245583_3245784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076178687.1|3245939_3246086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540861.1|3246088_3246973_-	recombinase RecT	NA	A0A139ZPK0	Marinitoga_camini_virus	45.8	5.8e-42
WP_045540863.1|3246985_3248035_-	YqaJ viral recombinase family protein	NA	O48490	Bacillus_phage	28.6	1.6e-22
WP_040108683.1|3248278_3248488_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003490698.1|3248487_3248700_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_045540867.1|3248736_3248931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052470467.1|3248998_3249592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045540868.1|3249581_3249974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045540869.1|3249974_3250793_-	transporter	NA	S6AVX3	Thermus_phage	61.6	2.5e-55
3255775:3255791	attR	CTATTAATAAAATAAAA	NA	NA	NA	NA
