assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000828695.1_ASM82869v1	NZ_AP014522	Pseudomonas protegens Cab57	1	1676794-1676998	1	PILER-CR	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GGTGGCCTGGTGGGCTACAACCAGAACAGCG	31	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA,NA|84aa|down_7|NZ_AP014522.1_1688264_1688516_-	NA|187aa|up_9|NZ_AP014522.1_1662848_1663409_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|293aa|up_8|NZ_AP014522.1_1663735_1664614_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|372aa|up_7|NZ_AP014522.1_1664631_1665747_+	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]	NA|253aa|up_6|NZ_AP014522.1_1665751_1666510_+	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	NA|238aa|up_5|NZ_AP014522.1_1666538_1667252_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|189aa|up_4|NZ_AP014522.1_1667999_1668566_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|248aa|up_3|NZ_AP014522.1_1668593_1669337_+	PRK09926, PRK09926, fimbrial chaperone	NA|861aa|up_2|NZ_AP014522.1_1669512_1672095_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|253aa|up_1|NZ_AP014522.1_1672094_1672853_+	PRK09926, PRK09926, fimbrial chaperone	NA|584aa|up_0|NZ_AP014522.1_1672827_1674579_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|341aa|down_0|NZ_AP014522.1_1678030_1679053_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|996aa|down_1|NZ_AP014522.1_1679196_1682184_+	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain	NA|263aa|down_2|NZ_AP014522.1_1682381_1683170_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|150aa|down_3|NZ_AP014522.1_1683328_1683778_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|568aa|down_4|NZ_AP014522.1_1684100_1685804_+	PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated	NA|452aa|down_5|NZ_AP014522.1_1685852_1687208_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|323aa|down_6|NZ_AP014522.1_1687239_1688208_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]	NA|84aa|down_7|NZ_AP014522.1_1688264_1688516_-	NA	NA|378aa|down_8|NZ_AP014522.1_1688521_1689655_-	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit	NA|396aa|down_9|NZ_AP014522.1_1689665_1690853_-	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit
GCF_000828695.1_ASM82869v1	NZ_AP014522	Pseudomonas protegens Cab57	2	4445389-4445530	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GAGCCGGCTTGCCGGCGAAGGGGCCAGCAAGCCTTGCATGGCCCT	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|117aa|up_5|NZ_AP014522.1_4440018_4440369_+,NA	NA|108aa|up_9|NZ_AP014522.1_4434564_4434888_+	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK	NA|618aa|up_8|NZ_AP014522.1_4434884_4436738_+	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|511aa|up_7|NZ_AP014522.1_4436777_4438310_+	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|488aa|up_6|NZ_AP014522.1_4438317_4439781_+	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|117aa|up_5|NZ_AP014522.1_4440018_4440369_+	NA	NA|106aa|up_4|NZ_AP014522.1_4440355_4440673_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|461aa|up_3|NZ_AP014522.1_4440741_4442124_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|567aa|up_2|NZ_AP014522.1_4442142_4443843_-	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|168aa|up_1|NZ_AP014522.1_4444113_4444617_+	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|251aa|up_0|NZ_AP014522.1_4444613_4445366_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|510aa|down_0|NZ_AP014522.1_4445560_4447090_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|401aa|down_1|NZ_AP014522.1_4447167_4448370_-	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|490aa|down_2|NZ_AP014522.1_4448384_4449854_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|161aa|down_3|NZ_AP014522.1_4449843_4450326_-	PRK11512, PRK11512, multiple antibiotic resistance transcriptional regulator MarR	NA|1058aa|down_4|NZ_AP014522.1_4450941_4454115_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|79aa|down_5|NZ_AP014522.1_4454136_4454373_+	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|205aa|down_6|NZ_AP014522.1_4454653_4455268_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|250aa|down_7|NZ_AP014522.1_4455340_4456090_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|830aa|down_8|NZ_AP014522.1_4456175_4458665_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1226aa|down_9|NZ_AP014522.1_4458669_4462347_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000828695.1_ASM82869v1	NZ_AP014522	Pseudomonas protegens Cab57	3	4765928-4766029	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	TTCGCTGGCAAGCCAGCTCCTACAA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA,NA|181aa|down_5|NZ_AP014522.1_4771053_4771596_+,NA|113aa|down_6|NZ_AP014522.1_4771592_4771931_+,NA|191aa|down_7|NZ_AP014522.1_4771927_4772500_+	NA|188aa|up_9|NZ_AP014522.1_4750432_4750996_+	TIGR03566, FMN_reduc_MsuE, FMN reductase, MsuE subfamily	NA|380aa|up_8|NZ_AP014522.1_4751005_4752145_+	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional	NA|396aa|up_7|NZ_AP014522.1_4752279_4753467_+	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|367aa|up_6|NZ_AP014522.1_4753491_4754592_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|122aa|up_5|NZ_AP014522.1_4754588_4754954_-	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|158aa|up_4|NZ_AP014522.1_4755062_4755536_+	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator	NA|613aa|up_3|NZ_AP014522.1_4755729_4757568_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|215aa|up_2|NZ_AP014522.1_4757564_4758209_+	pfam13353, Fer4_12, 4Fe-4S single cluster domain	NA|2106aa|up_1|NZ_AP014522.1_4758224_4764542_+	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]	NA|445aa|up_0|NZ_AP014522.1_4764538_4765873_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|257aa|down_0|NZ_AP014522.1_4766041_4766812_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|222aa|down_1|NZ_AP014522.1_4766894_4767560_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|408aa|down_2|NZ_AP014522.1_4767563_4768787_-	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family	NA|156aa|down_3|NZ_AP014522.1_4769069_4769537_+	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|408aa|down_4|NZ_AP014522.1_4769833_4771057_+	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|181aa|down_5|NZ_AP014522.1_4771053_4771596_+	NA	NA|113aa|down_6|NZ_AP014522.1_4771592_4771931_+	NA	NA|191aa|down_7|NZ_AP014522.1_4771927_4772500_+	NA	NA|310aa|down_8|NZ_AP014522.1_4772535_4773465_+	cd01017, AdcA, Metal binding protein AdcA	NA|248aa|down_9|NZ_AP014522.1_4773461_4774205_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
GCF_000828695.1_ASM82869v1	NZ_AP014522	Pseudomonas protegens Cab57	4	4785073-4785214	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GCGCCTGGCTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTAC	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA,NA|119aa|down_1|NZ_AP014522.1_4786152_4786509_-,NA|350aa|down_2|NZ_AP014522.1_4787048_4788098_-,NA|346aa|down_3|NZ_AP014522.1_4788246_4789284_-,NA|120aa|down_6|NZ_AP014522.1_4803483_4803843_-	NA|300aa|up_9|NZ_AP014522.1_4774204_4775104_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|328aa|up_8|NZ_AP014522.1_4775104_4776088_+	COG0803, LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]	NA|276aa|up_7|NZ_AP014522.1_4776299_4777127_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|75aa|up_6|NZ_AP014522.1_4777550_4777775_-	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|471aa|up_5|NZ_AP014522.1_4777857_4779270_-	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional	NA|442aa|up_4|NZ_AP014522.1_4779505_4780831_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|226aa|up_3|NZ_AP014522.1_4780831_4781509_-	PRK10643, PRK10643, two-component system response regulator PmrA	NA|584aa|up_2|NZ_AP014522.1_4781663_4783415_+	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional	NA|288aa|up_1|NZ_AP014522.1_4783414_4784278_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|256aa|up_0|NZ_AP014522.1_4784253_4785021_+	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional	NA|271aa|down_0|NZ_AP014522.1_4785231_4786044_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|119aa|down_1|NZ_AP014522.1_4786152_4786509_-	NA	NA|350aa|down_2|NZ_AP014522.1_4787048_4788098_-	NA	NA|346aa|down_3|NZ_AP014522.1_4788246_4789284_-	NA	NA|4339aa|down_4|NZ_AP014522.1_4789511_4802528_-	PRK05691, PRK05691, peptide synthase; Validated	NA|183aa|down_5|NZ_AP014522.1_4802901_4803450_+	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|120aa|down_6|NZ_AP014522.1_4803483_4803843_-	NA	NA|265aa|down_7|NZ_AP014522.1_4803932_4804727_-	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins	NA|208aa|down_8|NZ_AP014522.1_4804823_4805447_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|597aa|down_9|NZ_AP014522.1_4805633_4807424_+	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA
GCF_000828695.1_ASM82869v1	NZ_AP014522	Pseudomonas protegens Cab57	5	4786844-4786984	4	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	AGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGCATGG	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|119aa|up_0|NZ_AP014522.1_4786152_4786509_-,NA|350aa|down_0|NZ_AP014522.1_4787048_4788098_-,NA|346aa|down_1|NZ_AP014522.1_4788246_4789284_-,NA|120aa|down_4|NZ_AP014522.1_4803483_4803843_-	NA|276aa|up_9|NZ_AP014522.1_4776299_4777127_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|75aa|up_8|NZ_AP014522.1_4777550_4777775_-	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|471aa|up_7|NZ_AP014522.1_4777857_4779270_-	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional	NA|442aa|up_6|NZ_AP014522.1_4779505_4780831_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|226aa|up_5|NZ_AP014522.1_4780831_4781509_-	PRK10643, PRK10643, two-component system response regulator PmrA	NA|584aa|up_4|NZ_AP014522.1_4781663_4783415_+	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional	NA|288aa|up_3|NZ_AP014522.1_4783414_4784278_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|256aa|up_2|NZ_AP014522.1_4784253_4785021_+	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional	NA|271aa|up_1|NZ_AP014522.1_4785231_4786044_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|119aa|up_0|NZ_AP014522.1_4786152_4786509_-	NA	NA|350aa|down_0|NZ_AP014522.1_4787048_4788098_-	NA	NA|346aa|down_1|NZ_AP014522.1_4788246_4789284_-	NA	NA|4339aa|down_2|NZ_AP014522.1_4789511_4802528_-	PRK05691, PRK05691, peptide synthase; Validated	NA|183aa|down_3|NZ_AP014522.1_4802901_4803450_+	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|120aa|down_4|NZ_AP014522.1_4803483_4803843_-	NA	NA|265aa|down_5|NZ_AP014522.1_4803932_4804727_-	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins	NA|208aa|down_6|NZ_AP014522.1_4804823_4805447_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|597aa|down_7|NZ_AP014522.1_4805633_4807424_+	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|290aa|down_8|NZ_AP014522.1_4807434_4808304_+	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR	NA|539aa|down_9|NZ_AP014522.1_4808307_4809924_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
