The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010520	Clostridium botulinum strain NCTC 8266 chromosome, complete genome	3611897	438757	491916	3611897	protease,coat,tRNA	Clostridium_phage(23.08%)	51	NA	NA
WP_040968359.1|438757_439777_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.4	1.6e-64
WP_012449851.1|439779_440784_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_012451030.1|440947_442135_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.8	1.2e-15
WP_003370889.1|442298_442718_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_012449636.1|443042_444125_+	ethanolamine utilization protein EutH	NA	NA	NA	NA	NA
WP_012451456.1|444150_445275_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_012450092.1|445277_446399_-	glycosyltransferase family 4 protein	NA	B6EFC4	Stygiolobus_rod-shaped_virus	32.3	1.4e-05
WP_012449498.1|446545_447562_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_012449925.1|447536_448307_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_012451906.1|448395_449448_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_012450868.1|449641_450784_-	glycosyltransferase family 4 protein	NA	A0A1X9SJR9	Sulfolobus_islandicus_rod-shaped_virus	31.5	5.0e-06
WP_012450479.1|450893_451895_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_012451365.1|452219_453083_+	sporulation peptidase YabG	NA	NA	NA	NA	NA
WP_003369318.1|453270_453513_+	protein veg	NA	NA	NA	NA	NA
WP_012451197.1|453926_455489_+	DUF3794 domain-containing protein	NA	NA	NA	NA	NA
WP_012449460.1|455648_456494_+	cyanophycinase	NA	NA	NA	NA	NA
WP_012451943.1|456465_459084_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_012451223.1|459263_460106_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_012450528.1|460167_460794_+	stage II sporulation protein R	NA	NA	NA	NA	NA
WP_012451190.1|460831_461824_+	DUF814 domain-containing protein	NA	NA	NA	NA	NA
WP_012450981.1|461893_462316_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_003370410.1|462550_462850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012449540.1|463033_464635_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.4	1.4e-150
WP_079990996.1|465037_466654_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_012451175.1|466702_467809_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_003374052.1|467950_468160_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_012449758.1|468337_468925_+	thymidine kinase	NA	A0A249XXF6	Clostridium_phage	51.6	1.5e-51
WP_012451530.1|470987_472070_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_012449866.1|472152_472740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012450655.1|472758_473808_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.0	3.0e-45
WP_012451234.1|473930_474380_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_003372223.1|474425_475055_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_012451388.1|475164_475659_+	cytidine deaminase	NA	A7KUY9	Bacillus_phage	31.8	5.5e-10
WP_012449710.1|475787_476936_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	28.0	3.1e-27
WP_003374763.1|477065_478247_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_012450323.1|479126_479492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012450700.1|479493_480174_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003369994.1|480205_480421_+	ATP synthase F0 subunit C	NA	NA	NA	NA	NA
WP_012424573.1|480471_480951_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003373046.1|480953_481493_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_003370679.1|481503_483018_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003369206.1|483058_483910_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_003373604.1|483925_485317_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003371522.1|485330_485735_+	ATP synthase F1 subunit epsilon	NA	NA	NA	NA	NA
WP_012450007.1|485894_486533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012450874.1|486590_487853_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_012451086.1|487970_489008_+	stage II sporulation protein D	NA	Q2XU88	Pseudomonas_phage	38.4	5.9e-38
WP_012450551.1|489166_489892_+	M23 family metallopeptidase	NA	V5R8R0	Arthrobacter_phage	30.9	5.5e-06
WP_003373770.1|489982_490237_+	sporulation transcriptional regulator SpoIIID	NA	M9Q261	Clostridium_phage	60.0	4.8e-18
WP_003374639.1|490316_491351_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_012450000.1|491394_491916_-|protease	spore protease YyaC	protease	A0A0A8WIQ6	Clostridium_phage	37.9	4.8e-28
>prophage 2
NZ_CP010520	Clostridium botulinum strain NCTC 8266 chromosome, complete genome	3611897	906887	929056	3611897	plate,tail	Clostridium_phage(75.0%)	26	NA	NA
WP_003370603.1|906887_908012_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	37.6	4.2e-37
WP_012450333.1|908104_908791_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_012450186.1|908908_909700_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_012450896.1|909756_909993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012449952.1|910478_910940_-	membrane protein	NA	A0A0A7RTX7	Clostridium_phage	50.7	1.6e-35
WP_012449566.1|910957_911323_-	helix-turn-helix transcriptional regulator	NA	A0A2I7SCV6	Paenibacillus_phage	49.2	1.8e-05
WP_012451074.1|911577_912087_+	helix-turn-helix domain-containing protein	NA	I2E8Y5	Clostridium_phage	45.3	5.3e-32
WP_012450549.1|912847_913264_+	hypothetical protein	NA	A0A0A7RTL8	Clostridium_phage	32.2	7.7e-05
WP_012450957.1|913409_914720_+	hypothetical protein	NA	A0A0A7S087	Clostridium_phage	54.8	4.9e-130
WP_012450094.1|914738_915206_+|tail	phage tail tube protein	tail	A0A0A7RVP1	Clostridium_phage	72.4	5.2e-58
WP_012449452.1|915505_915919_+	hypothetical protein	NA	A0A0A7RTN3	Clostridium_phage	62.2	4.4e-45
WP_012449442.1|916114_918064_+	hypothetical protein	NA	A0A0A7S0K9	Clostridium_phage	33.0	7.7e-63
WP_012451299.1|918063_918726_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7RW06	Clostridium_phage	57.7	4.9e-70
WP_012451227.1|918737_919709_+	hypothetical protein	NA	A0A0A7RTZ4	Clostridium_phage	56.8	3.4e-104
WP_012450668.1|919712_920042_+	DUF2577 domain-containing protein	NA	A0A0A7RTJ2	Clostridium_phage	53.8	6.2e-26
WP_012451369.1|920034_920442_+	DUF2634 domain-containing protein	NA	A0A0A7RTH1	Clostridium_phage	62.5	3.0e-38
WP_012450854.1|920444_921503_+|plate	baseplate J/gp47 family protein	plate	A0A0A7S0L4	Clostridium_phage	51.7	1.1e-90
WP_040992110.1|921503_923585_+	hypothetical protein	NA	A0A0A7S1G0	Clostridium_phage	35.5	8.4e-76
WP_012450245.1|923586_924201_+	YmfQ family protein	NA	A0A0A7RTU9	Clostridium_phage	57.1	1.1e-60
WP_012451725.1|925032_925368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012451007.1|925360_925495_+	XkdX family protein	NA	A0A0A7S0E7	Clostridium_phage	54.5	6.5e-06
WP_012450325.1|925608_925809_+	UviB-like protein	NA	A0A2H4JAI7	uncultured_Caudovirales_phage	67.7	6.5e-18
WP_012451124.1|925947_926742_+	glycoside hydrolase	NA	A0A1U9WQS3	Geobacillus_phage	42.7	7.7e-38
WP_012450478.1|926889_927054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012451324.1|927076_927643_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012450785.1|928009_929056_+	hypothetical protein	NA	A0A1P8CWN9	Bacillus_phage	44.2	9.9e-09
>prophage 3
NZ_CP010520	Clostridium botulinum strain NCTC 8266 chromosome, complete genome	3611897	1076723	1090477	3611897		Cyanophage(22.22%)	11	NA	NA
WP_012450048.1|1076723_1077404_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	2.1e-31
WP_003369129.1|1077554_1077710_+	cytochrome c551	NA	NA	NA	NA	NA
WP_012451322.1|1077814_1079071_+	chloride channel protein	NA	NA	NA	NA	NA
WP_003369960.1|1079174_1080065_+	oxidoreductase	NA	A0A1V0SDE7	Indivirus	26.8	3.8e-09
WP_012451813.1|1080324_1084071_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	30.9	7.4e-30
WP_003371243.1|1084479_1084959_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.5	6.3e-27
WP_003369697.1|1084958_1085666_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SLB8	Cyanophage	45.2	3.3e-48
WP_003373905.1|1085781_1087209_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.3	1.3e-54
WP_012450386.1|1087218_1088220_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SR00	Cyanophage	46.6	1.8e-68
WP_017826400.1|1088207_1088822_+	phosphoribosylglycinamide formyltransferase	NA	R9S626	Prochlorococcus_phage	36.1	1.6e-22
WP_012450774.1|1088971_1090477_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	46.0	4.7e-36
>prophage 4
NZ_CP010520	Clostridium botulinum strain NCTC 8266 chromosome, complete genome	3611897	1831661	1861190	3611897	plate,capsid,tail,protease,tRNA	Bacteriophage(28.57%)	35	NA	NA
WP_012450019.1|1831661_1832591_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003374362.1|1832640_1832874_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_012451165.1|1832949_1834239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003370058.1|1834410_1835016_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	56.2	1.7e-13
WP_012449632.1|1835191_1835623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012451613.1|1835692_1836184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012450810.1|1836366_1836897_+	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_012449529.1|1837010_1838000_-	tyrosine recombinase XerC	NA	A0A2R2ZHE2	Clostridioides_phage	28.9	2.8e-21
WP_012450588.1|1838670_1839150_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_012451298.1|1839472_1840843_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_040992117.1|1841079_1841292_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_144311748.1|1842644_1842821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040968293.1|1842830_1843031_-	UviB-like protein	NA	A0A2H4JAI7	uncultured_Caudovirales_phage	70.8	2.0e-19
WP_012449645.1|1843104_1844109_-	hypothetical protein	NA	A0A1L2BYA9	Clostridium_phage	38.5	9.2e-12
WP_012450733.1|1846151_1846349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040968296.1|1846361_1846700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040968297.1|1846715_1848125_-|tail	phage tail protein	tail	A0A0A7RTP0	Clostridium_phage	67.3	8.3e-59
WP_012449486.1|1848124_1848787_-|tail	phage tail protein I	tail	A0A0C5AJ63	Bacteriophage	41.1	1.0e-22
WP_144311752.1|1848786_1849893_-	hypothetical protein	NA	A0A059WFM2	Vibrio_phage	37.0	1.2e-57
WP_012450959.1|1849930_1850251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012449967.1|1850253_1850796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012451795.1|1850800_1851001_-|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_144311749.1|1851000_1851924_-	hypothetical protein	NA	H7BVZ1	unidentified_phage	29.1	3.3e-32
WP_040968298.1|1851924_1852155_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_012449743.1|1852129_1854328_-	hypothetical protein	NA	A0A218KCH0	Bacillus_phage	34.3	2.4e-41
WP_012451061.1|1854493_1854817_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012451782.1|1854886_1855408_-|tail	phage major tail tube protein	tail	A0A0C5AJ56	Bacteriophage	37.2	1.5e-21
WP_012451286.1|1855407_1856844_-	hypothetical protein	NA	A0A2K9V2R6	Faecalibacterium_phage	35.6	5.1e-80
WP_012450688.1|1856856_1857381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012449968.1|1857390_1857963_-	hypothetical protein	NA	A0A0C5AEN6	Bacteriophage	26.8	1.4e-09
WP_012451331.1|1857962_1858274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012450951.1|1858263_1858491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012450276.1|1858521_1859568_-|capsid	major capsid protein	capsid	A0A0C5ABI0	Bacteriophage	47.1	2.6e-86
WP_012449726.1|1859583_1859931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079990991.1|1859930_1861190_-|protease	Clp protease ClpP	protease	A0A067ZG37	Vibrio_phage	36.4	5.7e-51
>prophage 5
NZ_CP010520	Clostridium botulinum strain NCTC 8266 chromosome, complete genome	3611897	1873386	1879926	3611897		Clostridium_phage(33.33%)	11	NA	NA
WP_012449837.1|1873386_1873599_-	hypothetical protein	NA	A0A0A7RUN7	Clostridium_phage	60.9	6.2e-19
WP_012451283.1|1873717_1873984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012450636.1|1874181_1874508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040968299.1|1874583_1874769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012449973.1|1875198_1876140_-	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	61.8	1.1e-64
WP_012450314.1|1876252_1877401_-	ParB N-terminal domain-containing protein	NA	A0A1D6Z271	Staphylococcus_phage	34.2	3.6e-12
WP_012450952.1|1877385_1878141_-	ParA family protein	NA	A0A1X9IGI7	Lactococcus_phage	29.0	1.6e-21
WP_012451023.1|1878353_1878527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012451770.1|1878555_1879032_-	hypothetical protein	NA	A0A2K9V3J3	Faecalibacterium_phage	40.8	1.0e-21
WP_012451011.1|1879153_1879345_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012451504.1|1879521_1879926_+	helix-turn-helix domain-containing protein	NA	A8ATJ9	Listeria_phage	44.8	2.7e-10
