The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	998257	1079564	2472129	terminase,holin,tail,protease,integrase	Staphylococcus_phage(91.38%)	80	1044475:1044495	1062938:1062958
WP_158484636.1|998257_998434_+	hypothetical protein	NA	A0A0N9SK66	Staphylococcus_phage	37.9	6.5e-06
WP_039644885.1|998715_998946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644889.1|999180_1000467_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_039644891.1|1000511_1000931_-	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	37.7	2.3e-17
WP_039644892.1|1000933_1001443_-	hypothetical protein	NA	A0A1Q1PVV5	Staphylococcus_phage	50.0	1.3e-38
WP_039644894.1|1001664_1003188_-	CHAP domain-containing protein	NA	A0A0N9SGX6	Staphylococcus_phage	42.5	1.1e-104
WP_039644896.1|1003243_1003639_-	hypothetical protein	NA	A0A0H4IPB8	Staphylococcus_phage	52.3	9.5e-37
WP_052257807.1|1003643_1006094_-	hypothetical protein	NA	A0A0H3U4S3	Staphylococcus_phage	40.1	2.7e-20
WP_039644898.1|1006118_1006439_-|holin	phage holin	holin	A0A1D6Z272	Staphylococcus_phage	39.3	5.7e-08
WP_039644900.1|1006616_1007018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039644902.1|1007075_1009811_-|tail	tail fiber domain-containing protein	tail	A0A0N9SHX2	Staphylococcus_phage	58.5	7.5e-274
WP_158484638.1|1009851_1010028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039644909.1|1010043_1010394_-	hypothetical protein	NA	A0A0N9SK58	Staphylococcus_phage	46.5	1.8e-15
WP_052257808.1|1010407_1017406_-	hypothetical protein	NA	A0A0N9RTX0	Staphylococcus_phage	38.5	0.0e+00
WP_039644918.1|1017456_1019535_-	hypothetical protein	NA	A0A0N9SGW2	Staphylococcus_phage	55.7	8.1e-220
WP_039644928.1|1019555_1028102_-|tail	phage tail tape measure protein	tail	A0A0N9S894	Staphylococcus_phage	49.0	0.0e+00
WP_039647563.1|1028198_1029197_-|integrase	site-specific integrase	integrase	A0A0N9SIX3	Staphylococcus_phage	75.6	5.0e-151
WP_052257809.1|1029238_1029718_-	hypothetical protein	NA	A0A0N9RRK6	Staphylococcus_phage	39.6	4.1e-26
WP_039644934.1|1029730_1030273_-	hypothetical protein	NA	A0A0N9SK55	Staphylococcus_phage	59.8	4.3e-56
WP_052257810.1|1030341_1030746_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_052257811.1|1030754_1031486_-	hypothetical protein	NA	A0A0N7GFG4	Staphylococcus_phage	54.0	2.9e-63
WP_039644935.1|1031520_1032330_-	hypothetical protein	NA	A0A0N9RZR7	Staphylococcus_phage	38.8	3.4e-49
WP_039644936.1|1032334_1032856_-	hypothetical protein	NA	A0A0N9ST98	Staphylococcus_phage	70.2	1.3e-65
WP_039644937.1|1032839_1033514_-	hypothetical protein	NA	A0A0N9SHW2	Staphylococcus_phage	67.7	6.3e-81
WP_039644938.1|1033515_1033932_-	hypothetical protein	NA	A0A0N9RTW0	Staphylococcus_phage	70.7	2.4e-43
WP_039644942.1|1033953_1034517_-	hypothetical protein	NA	A0A0N9SGV3	Staphylococcus_phage	62.8	2.4e-49
WP_039644943.1|1034598_1035600_-	hypothetical protein	NA	A0A0N9S885	Staphylococcus_phage	80.0	6.4e-90
WP_039644944.1|1035626_1036058_-	hypothetical protein	NA	A0A0N9SIW4	Staphylococcus_phage	65.8	1.3e-42
WP_039644945.1|1036086_1037592_-	hypothetical protein	NA	A0A0N9RRJ7	Staphylococcus_phage	42.7	1.9e-93
WP_039644946.1|1037584_1039135_-	hypothetical protein	NA	A0A0N9SK48	Staphylococcus_phage	69.0	1.4e-208
WP_039644948.1|1039154_1040960_-|terminase	terminase	terminase	A0A0N9RZP6	Staphylococcus_phage	78.2	3.9e-162
WP_039644950.1|1040959_1041850_-	hypothetical protein	NA	A0A0N9SHV5	Staphylococcus_phage	56.9	6.8e-91
WP_158484640.1|1042640_1043843_-	hypothetical protein	NA	A0A0N9SK37	Staphylococcus_phage	38.3	7.5e-69
WP_039644953.1|1043849_1044035_-	YonK family protein	NA	A0A0N7GFG2	Staphylococcus_phage	59.6	3.2e-11
WP_039644955.1|1044051_1044384_-	hypothetical protein	NA	NA	NA	NA	NA
1044475:1044495	attL	TGTTATATTTTATCTTTCTTA	NA	NA	NA	NA
WP_039644957.1|1044585_1046067_-	hypothetical protein	NA	A0A0N9SGU3	Staphylococcus_phage	43.6	5.0e-107
WP_039644959.1|1046181_1048461_+	AAA family ATPase	NA	A0A0N9S864	Staphylococcus_phage	58.2	6.1e-253
WP_039644962.1|1048482_1049376_+	hypothetical protein	NA	A0A0N9SIV7	Staphylococcus_phage	34.9	9.6e-37
WP_039644964.1|1050054_1050399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257812.1|1050710_1051274_+	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_158484642.1|1051547_1051721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039644966.1|1051742_1052285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158484644.1|1054621_1054762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082021531.1|1054950_1055151_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	61.0	1.3e-13
WP_158484646.1|1055269_1055428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644968.1|1055608_1055944_+	hypothetical protein	NA	A0A0N9RTT7	Staphylococcus_phage	43.9	4.7e-21
WP_039644971.1|1055998_1056358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644973.1|1056373_1056637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644974.1|1056926_1057181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257813.1|1057373_1057973_+	antirestriction protein ArdA	NA	A0A0N9SK30	Staphylococcus_phage	33.5	2.5e-20
WP_039644976.1|1058026_1058596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257814.1|1059276_1060317_+|integrase	site-specific integrase	integrase	A0A0N9SK33	Staphylococcus_phage	50.9	4.6e-83
WP_039644978.1|1060611_1061895_+	hypothetical protein	NA	A0A0N9RZM2	Staphylococcus_phage	52.3	3.0e-124
WP_039644980.1|1061904_1062924_+	hypothetical protein	NA	A0A0N9ST56	Staphylococcus_phage	40.3	1.1e-63
WP_039644983.1|1063055_1063298_+	hypothetical protein	NA	NA	NA	NA	NA
1062938:1062958	attR	TAAGAAAGATAAAATATAACA	NA	NA	NA	NA
WP_039644984.1|1063314_1063812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644985.1|1063823_1064474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039644986.1|1064515_1065466_+	hypothetical protein	NA	A0A0N7GFF9	Staphylococcus_phage	60.3	6.1e-98
WP_039644989.1|1065568_1066537_+	ATP-binding protein	NA	A0A0N9SGS5	Staphylococcus_phage	75.2	1.6e-141
WP_039644991.1|1066721_1067243_+	hypothetical protein	NA	A0A0N9S850	Staphylococcus_phage	52.6	2.3e-43
WP_052257815.1|1067260_1068826_+	helicase DnaB	NA	A0A0N9SIU7	Staphylococcus_phage	72.6	2.3e-219
WP_039644993.1|1068841_1069954_+	hypothetical protein	NA	A0A0N9RRG7	Staphylococcus_phage	62.6	6.0e-137
WP_111725056.1|1070070_1071708_+	single-stranded DNA-binding protein	NA	A0A0N9SK20	Staphylococcus_phage	58.9	5.4e-187
WP_052257816.1|1072105_1072528_+	hypothetical protein	NA	A0A0N9RRH5	Staphylococcus_phage	46.6	1.3e-23
WP_039644997.1|1072545_1072950_+	hypothetical protein	NA	I7DJR5	Staphylococcus_virus	32.9	5.5e-08
WP_039644998.1|1072939_1073338_+	hypothetical protein	NA	A0A1J0MFF1	Staphylococcus_phage	52.3	1.5e-29
WP_039644999.1|1073334_1073691_+	hypothetical protein	NA	Q4Z921	Staphylococcus_phage	47.9	6.6e-21
WP_086375155.1|1073692_1073896_+	hypothetical protein	NA	Q4ZC08	Staphylococcus_virus	61.3	7.5e-14
WP_039645001.1|1073885_1074113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645002.1|1074105_1074333_+	hypothetical protein	NA	A1BUA9	Staphylococcus_virus	34.6	5.5e-05
WP_039645003.1|1074333_1074621_+	hypothetical protein	NA	A0A2I6PCT3	Staphylococcus_phage	91.6	9.2e-42
WP_167706482.1|1074621_1074795_+	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	93.0	4.9e-22
WP_039645005.1|1074795_1074993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645006.1|1075006_1075186_+	hypothetical protein	NA	Q4ZD38	Staphylococcus_phage	83.1	2.8e-20
WP_039645007.1|1075186_1075672_+	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	79.0	1.9e-63
WP_167706483.1|1075668_1075833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645008.1|1075834_1076053_+	hypothetical protein	NA	V5XV41	Staphylococcus_phage	56.8	2.1e-17
WP_039645010.1|1076066_1076552_+	hypothetical protein	NA	A0A2H4J513	uncultured_Caudovirales_phage	42.5	2.7e-25
WP_039645012.1|1077773_1078085_-	hypothetical protein	NA	A0A2H4JG55	uncultured_Caudovirales_phage	42.7	2.0e-13
WP_052257817.1|1078742_1079564_-|protease	trypsin-like serine protease	protease	A0A0E3T8P7	Staphylococcus_phage	35.6	2.5e-39
>prophage 2
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1088008	1116466	2472129		Staphylococcus_phage(77.27%)	37	NA	NA
WP_039645027.1|1088008_1089112_+	hypothetical protein	NA	Q4ZCZ1	Staphylococcus_virus	40.7	1.9e-74
WP_039647590.1|1089539_1089914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645029.1|1090377_1090863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111725041.1|1091206_1091968_+	serine/threonine protein phosphatase	NA	A0A0N9SKA2	Staphylococcus_phage	48.2	2.2e-58
WP_039645030.1|1091991_1095939_+	DNA polymerase III subunit alpha	NA	A0A0N7GFH1	Staphylococcus_phage	71.5	0.0e+00
WP_039645032.1|1096012_1096393_+	hypothetical protein	NA	A0A0N9STI1	Staphylococcus_phage	43.2	2.8e-22
WP_039645034.1|1096480_1096813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039647594.1|1096796_1098086_+	DNA ligase	NA	A0A0N9SK95	Staphylococcus_phage	59.5	4.5e-144
WP_039645037.1|1098176_1098662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257819.1|1098710_1099127_+	nuclease	NA	A0A1W6JQ32	Staphylococcus_phage	63.5	3.4e-37
WP_162474603.1|1099101_1099254_+	hypothetical protein	NA	A0A0N9SH07	Staphylococcus_phage	70.2	6.4e-10
WP_039645039.1|1099263_1099509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645041.1|1099524_1099821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158484648.1|1099837_1100137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645045.1|1100178_1100442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645047.1|1100491_1101256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645050.1|1101321_1101930_+	nucleoside 2-deoxyribosyltransferase	NA	A0A0N9RZV9	Staphylococcus_phage	69.7	1.3e-77
WP_111725057.1|1101963_1102149_-	DNA cytosine methyltransferase	NA	Q77YW9	Bacillus_phage	60.5	3.6e-07
WP_158484650.1|1102225_1103086_+	DNA (cytosine-5-)-methyltransferase	NA	A0A219UR24	Bacillus_phage	32.8	1.7e-30
WP_039645056.1|1103119_1103401_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645058.1|1103424_1103736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645060.1|1103735_1104506_+	prohibitin family protein	NA	W5RV94	Staphylococcus_phage	62.3	4.5e-67
WP_039645062.1|1104505_1105111_+	hypothetical protein	NA	W5R8R7	Staphylococcus_phage	33.2	1.6e-14
WP_039645064.1|1105197_1105707_+	siphovirus Gp157 family protein	NA	A0A0N9SIY9	Staphylococcus_phage	49.1	1.4e-37
WP_039645066.1|1105718_1106417_+	hypothetical protein	NA	A0A0N9RRN5	Staphylococcus_phage	45.3	1.7e-52
WP_167706484.1|1106461_1106623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257820.1|1106603_1107008_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A0N9RZU5	Staphylococcus_phage	49.6	3.2e-24
WP_039645067.1|1107019_1110265_+	hypothetical protein	NA	A0A1P8CX40	Bacillus_phage	56.7	0.0e+00
WP_086375159.1|1110261_1111278_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4JMU8	Bacillus_phage	56.6	5.0e-98
WP_039645071.1|1111307_1111952_+	AAA family ATPase	NA	A0A0N9RTZ3	Staphylococcus_phage	51.2	2.8e-54
WP_039645074.1|1111954_1112197_+	thioredoxin family protein	NA	A0A0N9SGY3	Staphylococcus_phage	68.4	7.8e-26
WP_039645076.1|1112214_1112448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257821.1|1112461_1113175_+	NTP pyrophosphohydrolase	NA	A0A0N9SIY2	Staphylococcus_phage	63.8	3.2e-83
WP_039645078.1|1113180_1113528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645079.1|1113508_1114108_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0N7GFG7	Staphylococcus_phage	77.1	5.6e-81
WP_039645081.1|1114350_1114923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257822.1|1114915_1116466_+	recombinase family protein	NA	A0A0N9RZT8	Staphylococcus_phage	38.8	7.6e-90
>prophage 3
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1152246	1173661	2472129		Staphylococcus_phage(89.47%)	24	NA	NA
WP_039645146.1|1152246_1153656_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.1	2.4e-135
WP_039645148.1|1153652_1154642_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	47.6	5.2e-84
WP_039645150.1|1154638_1154869_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	75.7	6.5e-30
WP_039645152.1|1154931_1155402_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	52.2	6.4e-40
WP_039647610.1|1155406_1156165_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	61.6	4.3e-86
WP_039645154.1|1156192_1157773_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	75.4	2.8e-241
WP_039645157.1|1158202_1159402_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	79.6	2.1e-180
WP_039645159.1|1159490_1160399_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	69.4	5.6e-93
WP_039645161.1|1160579_1161416_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	67.9	1.5e-108
WP_039645163.1|1161797_1162163_-	CrcB family protein	NA	NA	NA	NA	NA
WP_039645165.1|1162159_1162525_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	52.9	4.8e-27
WP_039645167.1|1162545_1162848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039645169.1|1163002_1163713_+	transaldolase	NA	M1PR54	Cyanophage	37.0	1.7e-20
WP_039645170.1|1163806_1164256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052257826.1|1164238_1164673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039645172.1|1164687_1165149_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	41.0	3.6e-19
WP_039645174.1|1165347_1165572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645176.1|1165734_1166601_+	autolysin	NA	Q4ZE13	Staphylococcus_virus	39.7	1.4e-40
WP_039645178.1|1166939_1168610_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	57.1	6.2e-13
WP_039645180.1|1168995_1170042_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	51.7	5.7e-105
WP_039645182.1|1170046_1170676_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	55.7	3.8e-56
WP_039645184.1|1170689_1171871_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	65.4	3.8e-150
WP_039645186.1|1171882_1172341_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	64.5	1.6e-51
WP_052257827.1|1172620_1173661_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.0	5.1e-122
>prophage 4
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1177249	1185400	2472129	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_039645196.1|1177249_1177813_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	55.1	2.1e-53
WP_039645198.1|1177809_1178769_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	79.2	1.2e-61
WP_039645200.1|1178880_1180062_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	62.8	1.6e-132
WP_039645202.1|1180409_1182821_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	80.9	0.0e+00
WP_039645205.1|1182843_1183155_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	68.9	1.0e-33
WP_039645207.1|1184137_1185400_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	77.2	1.7e-34
>prophage 5
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1295624	1307052	2472129	tRNA	uncultured_Mediterranean_phage(42.86%)	8	NA	NA
WP_039645391.1|1295624_1296620_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	28.2	1.7e-05
WP_039645393.1|1296633_1297659_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_039645396.1|1297672_1298812_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	2.4e-88
WP_039645397.1|1298827_1299091_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	52.6	8.0e-08
WP_039645399.1|1299398_1301678_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	31.5	5.5e-28
WP_039645401.1|1301771_1304054_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.6	3.5e-67
WP_039645403.1|1304065_1304584_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.8	4.0e-27
WP_039645405.1|1304862_1307052_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	35.5	1.9e-09
>prophage 6
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1438711	1448259	2472129		Bacillus_phage(42.86%)	11	NA	NA
WP_039645663.1|1438711_1439599_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	32.1	2.1e-39
WP_052257833.1|1439622_1440126_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_039645665.1|1440223_1440958_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	29.3	9.4e-06
WP_039645667.1|1440941_1441487_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.3	3.0e-09
WP_039645669.1|1441483_1442224_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_039645671.1|1442352_1443078_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.5	3.0e-44
WP_039647639.1|1443061_1444798_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	30.1	1.0e-29
WP_039645673.1|1444929_1445478_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_037573797.1|1445582_1445831_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	52.0	3.4e-16
WP_039645676.1|1445936_1446893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039645678.1|1446882_1448259_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	32.9	4.6e-54
>prophage 7
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	1843025	1851453	2472129		Prochlorococcus_phage(33.33%)	9	NA	NA
WP_039646358.1|1843025_1843592_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	38.4	5.7e-27
WP_039646360.1|1843594_1844623_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.2	1.1e-63
WP_039646362.1|1844627_1846049_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.2	1.6e-49
WP_039646365.1|1846027_1848217_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.3	6.9e-137
WP_039646367.1|1848209_1848881_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_039647678.1|1848880_1849150_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_039646369.1|1849152_1849860_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.4	8.1e-47
WP_082021550.1|1849856_1851053_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_039646374.1|1850970_1851453_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.3	1.2e-22
>prophage 8
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	2035114	2041901	2472129	integrase	Streptococcus_phage(28.57%)	8	2036387:2036401	2044196:2044210
WP_037567914.1|2035114_2035315_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	64.6	2.2e-18
WP_039646677.1|2035726_2036311_+	hypothetical protein	NA	NA	NA	NA	NA
2036387:2036401	attL	CGATTCATATAAAAA	NA	NA	NA	NA
WP_158484666.1|2036536_2036776_+|integrase	tyrosine-type recombinase/integrase	integrase	Q4ZC42	Staphylococcus_virus	88.6	1.0e-33
WP_039646679.1|2037167_2037749_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	56.3	1.6e-53
WP_039646681.1|2037787_2038732_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.3	1.3e-52
WP_039646682.1|2038868_2039876_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	42.6	5.4e-52
WP_039646684.1|2039862_2040786_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	32.8	4.4e-08
WP_039646686.1|2040956_2041901_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.8	1.4e-83
2044196:2044210	attR	CGATTCATATAAAAA	NA	NA	NA	NA
>prophage 9
NZ_CP008747	Staphylococcus hyicus strain ATCC 11249 chromosome, complete genome	2472129	2075201	2084814	2472129		uncultured_Caudovirales_phage(33.33%)	8	NA	NA
WP_039646736.1|2075201_2077307_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	85.9	0.0e+00
WP_039646739.1|2077278_2077668_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	62.8	1.5e-42
WP_039646741.1|2078385_2079255_+	DMT family transporter	NA	NA	NA	NA	NA
WP_039646743.1|2079284_2079785_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.8	1.0e-51
WP_039646745.1|2080076_2081588_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.8	9.8e-74
WP_039646747.1|2081950_2082880_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	24.4	3.2e-11
WP_039647713.1|2083166_2083697_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_039646749.1|2083764_2084814_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.0	7.4e-20
