assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000816045.1_ASM81604v1	NZ_CP006929	Dickeya zeae EC1 chromosome, complete genome	1	245301-245425	1	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	Orphan	TCACCCTACGGGCCGTCACAGGTGACGTTAAAAAACGCTTTCAGCGTT	48	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	NA,NA|208aa|down_6|NZ_CP006929.1_250434_251058_-	NA|317aa|up_9|NZ_CP006929.1_229297_230248_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|395aa|up_8|NZ_CP006929.1_231607_232792_+	PRK00049, PRK00049, elongation factor Tu; Reviewed	NA|128aa|up_7|NZ_CP006929.1_233025_233409_+	PRK05740, secE, preprotein translocase subunit SecE; Reviewed	NA|182aa|up_6|NZ_CP006929.1_233410_233956_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|143aa|up_5|NZ_CP006929.1_234104_234533_+	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|235aa|up_4|NZ_CP006929.1_234536_235241_+	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|166aa|up_3|NZ_CP006929.1_235556_236054_+	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|123aa|up_2|NZ_CP006929.1_236120_236489_+	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|1343aa|up_1|NZ_CP006929.1_236813_240842_+	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|1408aa|up_0|NZ_CP006929.1_240949_245173_+	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|366aa|down_0|NZ_CP006929.1_245494_246592_+	pfam06674, DUF1176, Protein of unknown function (DUF1176)	NA|61aa|down_1|NZ_CP006929.1_246859_247042_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|53aa|down_2|NZ_CP006929.1_247278_247437_-	pfam06568, DUF1127, Domain of unknown function (DUF1127)	NA|479aa|down_3|NZ_CP006929.1_247611_249048_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|256aa|down_4|NZ_CP006929.1_249059_249827_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|201aa|down_5|NZ_CP006929.1_249819_250422_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_6|NZ_CP006929.1_250434_251058_-	NA	NA|224aa|down_7|NZ_CP006929.1_251207_251879_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|478aa|down_8|NZ_CP006929.1_251875_253309_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|382aa|down_9|NZ_CP006929.1_253355_254501_-	PRK09240, thiH, 2-iminoacetate synthase ThiH
GCF_000816045.1_ASM81604v1	NZ_CP006929	Dickeya zeae EC1 chromosome, complete genome	2	402223-403962	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	Type I-E	GAGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	31,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	25,28,28,25	28	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	NA|88aa|up_8|NZ_CP006929.1_392172_392436_-,NA	NA|432aa|up_9|NZ_CP006929.1_390823_392119_-	COG1898, RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|88aa|up_8|NZ_CP006929.1_392172_392436_-	NA	cas3|918aa|up_7|NZ_CP006929.1_393196_395950_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|512aa|up_6|NZ_CP006929.1_396212_397748_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|240aa|up_5|NZ_CP006929.1_397740_398460_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|354aa|up_4|NZ_CP006929.1_398456_399518_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|246aa|up_3|NZ_CP006929.1_399525_400263_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|216aa|up_2|NZ_CP006929.1_400262_400910_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|308aa|up_1|NZ_CP006929.1_400926_401850_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP006929.1_401846_402140_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|560aa|down_0|NZ_CP006929.1_404021_405701_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|151aa|down_1|NZ_CP006929.1_406458_406911_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|155aa|down_2|NZ_CP006929.1_407123_407588_-	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein	NA|723aa|down_3|NZ_CP006929.1_407688_409857_-	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|303aa|down_4|NZ_CP006929.1_410243_411152_+	pfam02574, S-methyl_trans, Homocysteine S-methyltransferase	NA|514aa|down_5|NZ_CP006929.1_411222_412764_+	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|333aa|down_6|NZ_CP006929.1_412813_413812_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|274aa|down_7|NZ_CP006929.1_413839_414661_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|532aa|down_8|NZ_CP006929.1_414653_416249_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|160aa|down_9|NZ_CP006929.1_416352_416832_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family
GCF_000816045.1_ASM81604v1	NZ_CP006929	Dickeya zeae EC1 chromosome, complete genome	3	669453-672475	3,3,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	47,49,49,47	49	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	NA|20aa|up_8|NZ_CP006929.1_661126_661186_+,NA	NA|295aa|up_9|NZ_CP006929.1_660133_661018_+	PRK11189, PRK11189, lipoprotein NlpI; Provisional	NA|20aa|up_8|NZ_CP006929.1_661126_661186_+	NA	NA|626aa|up_7|NZ_CP006929.1_661198_663076_+	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|441aa|up_6|NZ_CP006929.1_663212_664535_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|340aa|up_5|NZ_CP006929.1_664582_665602_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|293aa|up_4|NZ_CP006929.1_665720_666599_-	PRK15447, PRK15447, putative protease; Provisional	NA|333aa|up_3|NZ_CP006929.1_666617_667616_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|up_2|NZ_CP006929.1_667936_668461_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|up_1|NZ_CP006929.1_668454_668958_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|101aa|up_0|NZ_CP006929.1_668944_669247_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|260aa|down_0|NZ_CP006929.1_672667_673447_+	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional	NA|444aa|down_1|NZ_CP006929.1_673507_674839_+	PRK05820, deoA, thymidine phosphorylase; Reviewed	NA|408aa|down_2|NZ_CP006929.1_674921_676145_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|242aa|down_3|NZ_CP006929.1_676404_677130_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|down_4|NZ_CP006929.1_677466_677910_-	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|140aa|down_5|NZ_CP006929.1_677878_678298_-	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|343aa|down_6|NZ_CP006929.1_678472_679501_+	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|332aa|down_7|NZ_CP006929.1_679569_680565_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|301aa|down_8|NZ_CP006929.1_680679_681582_+	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|99aa|down_9|NZ_CP006929.1_682642_682939_-	pfam07256, DUF1435, Protein of unknown function (DUF1435)
GCF_000816045.1_ASM81604v1	NZ_CP006929	Dickeya zeae EC1 chromosome, complete genome	4	3615548-3615937	5,4,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	Orphan	GTGAACTGCCGCATAGGCAGCTTAGAAA,GTGAACTGCCGCATAGGCAGCTTAGAAA,GTGAACTGCCGCATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	5,6,6	6	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,csa3,RT,DinG	NA,NA|72aa|down_9|NZ_CP006929.1_3629544_3629760_+	NA|410aa|up_9|NZ_CP006929.1_3602667_3603897_+	cd17268, RMtype1_S_Ara36733I_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|392aa|up_8|NZ_CP006929.1_3603898_3605074_+	pfam13166, AAA_13, AAA domain	NA|1033aa|up_7|NZ_CP006929.1_3605066_3608165_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|345aa|up_6|NZ_CP006929.1_3608394_3609429_+	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|93aa|up_5|NZ_CP006929.1_3609617_3609896_+	PRK09459, pspG, envelope stress response protein PspG	NA|332aa|up_4|NZ_CP006929.1_3610291_3611287_-	PRK10754, PRK10754, NADPH:quinone reductase	NA|468aa|up_3|NZ_CP006929.1_3611410_3612814_+	PRK08006, PRK08006, replicative DNA helicase DnaB	NA|359aa|up_2|NZ_CP006929.1_3612848_3613925_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|83aa|up_1|NZ_CP006929.1_3614082_3614331_-	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|256aa|up_0|NZ_CP006929.1_3614574_3615342_-	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|458aa|down_0|NZ_CP006929.1_3616341_3617715_-	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|159aa|down_1|NZ_CP006929.1_3618086_3618563_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|205aa|down_2|NZ_CP006929.1_3618812_3619427_+	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|398aa|down_3|NZ_CP006929.1_3619467_3620661_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|557aa|down_4|NZ_CP006929.1_3621043_3622714_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|523aa|down_5|NZ_CP006929.1_3623712_3625281_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|140aa|down_6|NZ_CP006929.1_3625327_3625747_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|944aa|down_7|NZ_CP006929.1_3625838_3628670_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|183aa|down_8|NZ_CP006929.1_3628905_3629454_+	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|72aa|down_9|NZ_CP006929.1_3629544_3629760_+	NA
