assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000815105.2_ASM81510v2	NZ_CP010310	Pandoraea pulmonicola strain DSM 16583 chromosome, complete genome	1	2035066-2035208	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG,PD-DExK	Orphan	TCGCGGGCAAGGTCGGCAGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,WYL,DEDDh,DinG,PD-DExK	NA|246aa|up_6|NZ_CP010310.2_2026322_2027060_-,NA|102aa|up_4|NZ_CP010310.2_2028053_2028359_-,NA|370aa|up_0|NZ_CP010310.2_2032241_2033351_-,NA	NA|304aa|up_9|NZ_CP010310.2_2023798_2024710_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|200aa|up_8|NZ_CP010310.2_2025074_2025674_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|181aa|up_7|NZ_CP010310.2_2025728_2026271_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|246aa|up_6|NZ_CP010310.2_2026322_2027060_-	NA	NA|264aa|up_5|NZ_CP010310.2_2027181_2027973_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|102aa|up_4|NZ_CP010310.2_2028053_2028359_-	NA	NA|294aa|up_3|NZ_CP010310.2_2028476_2029358_-	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1	NA|288aa|up_2|NZ_CP010310.2_2029926_2030790_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|300aa|up_1|NZ_CP010310.2_2030837_2031737_-	pfam12294, DUF3626, Protein of unknown function (DUF3626)	NA|370aa|up_0|NZ_CP010310.2_2032241_2033351_-	NA	NA|1331aa|down_0|NZ_CP010310.2_2037293_2041286_-	pfam05359, DUF748, Domain of Unknown Function (DUF748)	NA|242aa|down_1|NZ_CP010310.2_2041401_2042127_-	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP	NA|232aa|down_2|NZ_CP010310.2_2042128_2042824_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|145aa|down_3|NZ_CP010310.2_2043311_2043746_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|378aa|down_4|NZ_CP010310.2_2043814_2044948_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|429aa|down_5|NZ_CP010310.2_2045052_2046339_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|163aa|down_6|NZ_CP010310.2_2046443_2046932_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|290aa|down_7|NZ_CP010310.2_2048443_2049313_-	COG5495, COG5495, Uncharacterized conserved protein [Function unknown]	NA|150aa|down_8|NZ_CP010310.2_2049394_2049844_-	pfam05154, TM2, TM2 domain	NA|270aa|down_9|NZ_CP010310.2_2049853_2050663_-	pfam14302, DUF4377, Domain of unknown function (DUF4377)
GCF_000815105.2_ASM81510v2	NZ_CP010310	Pandoraea pulmonicola strain DSM 16583 chromosome, complete genome	2	2822637-2822720	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG,PD-DExK	Orphan	ACGAGAACCGACTACGCTGGCTCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,DinG,PD-DExK	NA|91aa|up_4|NZ_CP010310.2_2816419_2816692_+,NA|88aa|up_3|NZ_CP010310.2_2816723_2816987_+,NA|160aa|up_0|NZ_CP010310.2_2820667_2821147_+,NA|171aa|down_0|NZ_CP010310.2_2824556_2825069_+,NA|207aa|down_4|NZ_CP010310.2_2830188_2830809_-,NA|56aa|down_6|NZ_CP010310.2_2832040_2832208_-	NA|284aa|up_9|NZ_CP010310.2_2811498_2812350_-	pfam13679, Methyltransf_32, Methyltransferase domain	NA|274aa|up_8|NZ_CP010310.2_2812656_2813478_+	pfam02311, AraC_binding, AraC-like ligand binding domain	NA|143aa|up_7|NZ_CP010310.2_2813560_2813989_+	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain	NA|377aa|up_6|NZ_CP010310.2_2814030_2815161_+	TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC	NA|134aa|up_5|NZ_CP010310.2_2815542_2815944_+	cd12211, Bc2l-C_N, N-Terminal Domain Of Bc2l-C Lectin	NA|91aa|up_4|NZ_CP010310.2_2816419_2816692_+	NA	NA|88aa|up_3|NZ_CP010310.2_2816723_2816987_+	NA	NA|281aa|up_2|NZ_CP010310.2_2817082_2817925_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|693aa|up_1|NZ_CP010310.2_2818556_2820635_+	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|160aa|up_0|NZ_CP010310.2_2820667_2821147_+	NA	NA|171aa|down_0|NZ_CP010310.2_2824556_2825069_+	NA	NA|642aa|down_1|NZ_CP010310.2_2825204_2827130_-	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme	NA|456aa|down_2|NZ_CP010310.2_2827436_2828804_-	PRK15387, PRK15387, type III secretion system effector E3 ubiquitin transferase SspH2	NA|340aa|down_3|NZ_CP010310.2_2829012_2830032_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|207aa|down_4|NZ_CP010310.2_2830188_2830809_-	NA	NA|179aa|down_5|NZ_CP010310.2_2831471_2832008_-	pfam13238, AAA_18, AAA domain	NA|56aa|down_6|NZ_CP010310.2_2832040_2832208_-	NA	NA|618aa|down_7|NZ_CP010310.2_2832918_2834772_+	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium	NA|166aa|down_8|NZ_CP010310.2_2836531_2837029_+	PRK12527, PRK12527, RNA polymerase sigma factor; Reviewed	NA|348aa|down_9|NZ_CP010310.2_2837128_2838172_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]
GCF_000815105.2_ASM81510v2	NZ_CP010310	Pandoraea pulmonicola strain DSM 16583 chromosome, complete genome	3	3358536-3358923	3	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG,PD-DExK	Orphan	CAACTGACCCGCCTGCCGGCCTTGCCCG	28	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,WYL,DEDDh,DinG,PD-DExK	NA|546aa|up_9|NZ_CP010310.2_3340166_3341804_-,NA|132aa|up_8|NZ_CP010310.2_3342427_3342823_+,NA|577aa|up_7|NZ_CP010310.2_3342901_3344632_-,NA|266aa|up_5|NZ_CP010310.2_3347208_3348006_-,NA|159aa|up_3|NZ_CP010310.2_3350616_3351093_+,NA|54aa|up_2|NZ_CP010310.2_3352553_3352715_-,NA|344aa|up_1|NZ_CP010310.2_3352996_3354028_+,NA|897aa|up_0|NZ_CP010310.2_3354141_3356832_-,NA|1064aa|down_1|NZ_CP010310.2_3365684_3368876_-,NA|121aa|down_4|NZ_CP010310.2_3373342_3373705_+	NA|546aa|up_9|NZ_CP010310.2_3340166_3341804_-	NA	NA|132aa|up_8|NZ_CP010310.2_3342427_3342823_+	NA	NA|577aa|up_7|NZ_CP010310.2_3342901_3344632_-	NA	NA|526aa|up_6|NZ_CP010310.2_3344935_3346513_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|266aa|up_5|NZ_CP010310.2_3347208_3348006_-	NA	NA|299aa|up_4|NZ_CP010310.2_3348879_3349776_+	pfam13650, Asp_protease_2, Aspartyl protease	NA|159aa|up_3|NZ_CP010310.2_3350616_3351093_+	NA	NA|54aa|up_2|NZ_CP010310.2_3352553_3352715_-	NA	NA|344aa|up_1|NZ_CP010310.2_3352996_3354028_+	NA	NA|897aa|up_0|NZ_CP010310.2_3354141_3356832_-	NA	NA|1603aa|down_0|NZ_CP010310.2_3360697_3365506_+	PRK09169, PRK09169, hypothetical protein; Validated	NA|1064aa|down_1|NZ_CP010310.2_3365684_3368876_-	NA	NA|707aa|down_2|NZ_CP010310.2_3369848_3371969_+	TIGR01778, TonB-copper, TonB-dependent copper receptor	NA|262aa|down_3|NZ_CP010310.2_3372301_3373087_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|121aa|down_4|NZ_CP010310.2_3373342_3373705_+	NA	NA|423aa|down_5|NZ_CP010310.2_3374180_3375449_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|404aa|down_6|NZ_CP010310.2_3375700_3376912_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|378aa|down_7|NZ_CP010310.2_3377449_3378583_-	pfam07434, CblD, CblD like pilus biogenesis initiator	NA|108aa|down_8|NZ_CP010310.2_3379233_3379557_-	pfam10721, DUF2514, Protein of unknown function (DUF2514)	NA|241aa|down_9|NZ_CP010310.2_3379558_3380281_-	TIGR02690, arsenical_resistance_protein_ArsH_putative, arsenical resistance protein ArsH
