The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010346	Listeria monocytogenes strain IZSAM_Lm_hs2008 chromosome, complete genome	2904228	131108	137635	2904228	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003728215.1|131108_131561_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|131566_131902_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003724946.1|132118_132547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724947.1|132558_132975_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
WP_003728212.1|133254_133644_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|133656_134169_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|134216_134519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003740367.1|134560_134965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724950.1|134951_136820_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	2.0e-20
WP_003724951.1|136816_137635_+|tail	phage tail family protein	tail	A0A2H4JAE4	uncultured_Caudovirales_phage	34.9	1.7e-40
>prophage 2
NZ_CP010346	Listeria monocytogenes strain IZSAM_Lm_hs2008 chromosome, complete genome	2904228	1120645	1127571	2904228	integrase	Bacillus_virus(33.33%)	8	1110056:1110069	1128150:1128163
1110056:1110069	attL	AGAAGCGGGAATAA	NA	NA	NA	NA
WP_003724632.1|1120645_1122136_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.5	2.8e-113
WP_003724633.1|1122147_1122972_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_003724634.1|1122984_1123293_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003724635.1|1123352_1123757_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_012681222.1|1123885_1125442_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
WP_003724637.1|1125640_1126120_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JDE4	uncultured_Caudovirales_phage	34.3	7.3e-07
WP_003724638.1|1126297_1126495_+	LysR family transcriptional regulator	NA	Q8SBM7	Clostridium_phage	46.3	1.5e-06
WP_003740555.1|1126497_1127571_+|integrase	site-specific integrase	integrase	A0A0A8WF08	Clostridium_phage	46.5	5.5e-87
1128150:1128163	attR	AGAAGCGGGAATAA	NA	NA	NA	NA
>prophage 3
NZ_CP010346	Listeria monocytogenes strain IZSAM_Lm_hs2008 chromosome, complete genome	2904228	1277579	1334433	2904228	tRNA,protease	Bacillus_virus(16.67%)	56	NA	NA
WP_003734523.1|1277579_1278719_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1278798_1279194_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1279344_1279560_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|1279683_1280217_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003731300.1|1280232_1280898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003727521.1|1281159_1282098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1282212_1283496_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1283680_1284940_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003726393.1|1285058_1285625_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|1285659_1286229_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|1286330_1286873_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|1286882_1287746_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|1287742_1288528_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003726399.1|1288661_1289522_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|1289794_1291873_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003726401.1|1291935_1293240_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_031645173.1|1293522_1294425_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|1294445_1294985_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003727514.1|1294998_1296408_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
WP_003726695.1|1296428_1297208_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003726696.1|1297311_1297731_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1297753_1298065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|1298067_1298940_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003726698.1|1298981_1299578_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003726699.1|1299735_1300143_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|1300323_1302291_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_003734522.1|1302287_1304747_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003726814.1|1304830_1305298_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_020830742.1|1305925_1307746_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003734520.1|1307778_1309665_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	32.2	2.9e-43
WP_003726657.1|1309877_1310576_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_003723738.1|1310808_1312485_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|1312611_1313529_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1313650_1313884_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_012681271.1|1313994_1315218_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|1315210_1316437_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1316638_1317007_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1317077_1318412_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003726564.1|1318555_1319851_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.5e-147
WP_003726565.1|1319884_1320409_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1320439_1321054_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003726566.1|1321210_1321540_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003726567.1|1321633_1321861_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|1322007_1324002_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|1324222_1324462_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|1324510_1325242_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|1325263_1325770_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003726670.1|1325779_1327084_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	51.9	4.7e-133
WP_077916944.1|1327073_1328279_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.4	1.7e-89
WP_003726672.1|1328256_1328631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1328923_1329652_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1329651_1330209_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_031642179.1|1330439_1331198_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	3.3e-22
WP_003727496.1|1331211_1332000_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_039117865.1|1332014_1333157_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003726415.1|1333170_1334433_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NZ_CP010346	Listeria monocytogenes strain IZSAM_Lm_hs2008 chromosome, complete genome	2904228	1825536	1833822	2904228		Synechococcus_phage(33.33%)	8	NA	NA
WP_003726209.1|1825536_1826103_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
WP_003726210.1|1826099_1827149_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003722245.1|1827167_1828595_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_003726211.1|1828579_1830799_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	2.5e-158
WP_003726212.1|1830791_1831475_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003726213.1|1831478_1831724_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003726214.1|1831735_1832449_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
WP_003726215.1|1832529_1833822_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 5
NZ_CP010346	Listeria monocytogenes strain IZSAM_Lm_hs2008 chromosome, complete genome	2904228	2505085	2512930	2904228		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2505085_2506057_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003725408.1|2506064_2507033_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	3.9e-68
WP_003722606.1|2507034_2507910_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003725409.1|2508017_2509748_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
WP_003741152.1|2509789_2510851_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2510867_2511851_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2511970_2512930_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
