assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000807405.2_ASM80740v4	NZ_CP012165	Enterobacter hormaechei subsp. xiangfangensis strain 34978 chromosome, complete genome	1	406289-406383	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG,RT	Orphan	GAGCGCTGTTGCCAGTGGCAACA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG,RT	NA|83aa|up_1|NZ_CP012165.1_404629_404878_+,NA|185aa|down_1|NZ_CP012165.1_407270_407825_+	NA|501aa|up_9|NZ_CP012165.1_390508_392011_+	PRK10642, PRK10642, proline/glycine betaine transporter ProP	NA|318aa|up_8|NZ_CP012165.1_392043_392997_-	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|207aa|up_7|NZ_CP012165.1_398554_399175_-	PRK09867, PRK09867, hypothetical protein; Provisional	NA|292aa|up_6|NZ_CP012165.1_399397_400273_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|457aa|up_5|NZ_CP012165.1_400265_401636_+	TIGR00665, DnaB, replicative DNA helicase	NA|567aa|up_4|NZ_CP012165.1_401632_403333_+	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|237aa|up_3|NZ_CP012165.1_403325_404036_+	pfam10979, DUF2786, Protein of unknown function (DUF2786)	NA|197aa|up_2|NZ_CP012165.1_404042_404633_+	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|83aa|up_1|NZ_CP012165.1_404629_404878_+	NA	NA|413aa|up_0|NZ_CP012165.1_404977_406216_+	pfam13730, HTH_36, Helix-turn-helix domain	NA|242aa|down_0|NZ_CP012165.1_406543_407269_+	pfam08900, DUF1845, Domain of unknown function (DUF1845)	NA|185aa|down_1|NZ_CP012165.1_407270_407825_+	NA	NA|670aa|down_2|NZ_CP012165.1_407840_409850_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|430aa|down_3|NZ_CP012165.1_410190_411480_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|171aa|down_4|NZ_CP012165.1_411501_412014_-	PRK14776, PRK14776, lipoprotein signal peptidase; Provisional	NA|299aa|down_5|NZ_CP012165.1_412017_412914_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|136aa|down_6|NZ_CP012165.1_413009_413417_+	TIGR02047, putative_regulatory_protein, Cd(II)/Pb(II)-responsive transcriptional regulator	NA|157aa|down_7|NZ_CP012165.1_413865_414336_+	pfam12101, DUF3577, Protein of unknown function (DUF3577)	NA|179aa|down_8|NZ_CP012165.1_414396_414933_+	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|81aa|down_9|NZ_CP012165.1_414997_415240_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)
GCF_000807405.2_ASM80740v4	NZ_CP012165	Enterobacter hormaechei subsp. xiangfangensis strain 34978 chromosome, complete genome	2	1403075-1403189	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG,RT	Orphan	GCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGG	34	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG,RT	NA,NA	NA|491aa|up_9|NZ_CP012165.1_1393759_1395232_-	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional	NA|196aa|up_8|NZ_CP012165.1_1395245_1395833_-	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|678aa|up_7|NZ_CP012165.1_1395961_1397995_+	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|129aa|up_6|NZ_CP012165.1_1398133_1398520_+	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system	NA|95aa|up_5|NZ_CP012165.1_1398522_1398807_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|304aa|up_4|NZ_CP012165.1_1399018_1399930_+	cd01137, PsaA, Metal binding protein PsaA	NA|269aa|up_3|NZ_CP012165.1_1399932_1400739_+	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein	NA|283aa|up_2|NZ_CP012165.1_1400735_1401584_+	pfam00950, ABC-3, ABC 3 transport family	NA|280aa|up_1|NZ_CP012165.1_1401580_1402420_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|230aa|up_0|NZ_CP012165.1_1402355_1403045_-	PRK10251, PRK10251, enterobactin synthase subunit EntD	NA|747aa|down_0|NZ_CP012165.1_1403206_1405447_-	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor	NA|400aa|down_1|NZ_CP012165.1_1405593_1406793_+	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|71aa|down_2|NZ_CP012165.1_1406803_1407016_+	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1286aa|down_3|NZ_CP012165.1_1407012_1410870_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|267aa|down_4|NZ_CP012165.1_1410958_1411759_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|330aa|down_5|NZ_CP012165.1_1411755_1412745_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|335aa|down_6|NZ_CP012165.1_1412744_1413749_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|416aa|down_7|NZ_CP012165.1_1413857_1415105_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_8|NZ_CP012165.1_1415151_1416111_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|392aa|down_9|NZ_CP012165.1_1416299_1417475_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional
GCF_000807405.2_ASM80740v4	NZ_CP012165	Enterobacter hormaechei subsp. xiangfangensis strain 34978 chromosome, complete genome	3	2107657-2107780	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,DEDDh,WYL,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG,RT	NA|47aa|up_9|NZ_CP012165.1_2096400_2096541_-,NA|30aa|down_6|NZ_CP012165.1_2115223_2115313_+	NA|47aa|up_9|NZ_CP012165.1_2096400_2096541_-	NA	NA|261aa|up_8|NZ_CP012165.1_2096666_2097449_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|212aa|up_7|NZ_CP012165.1_2097521_2098157_+	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|164aa|up_6|NZ_CP012165.1_2100375_2100867_+	pfam05591, T6SS_VipA, Type VI secretion system, VipA, VC_A0107 or Hcp2	NA|510aa|up_5|NZ_CP012165.1_2100907_2102437_+	TIGR03355, VI_chp_2, type VI secretion protein, EvpB/VC_A0108 family	NA|168aa|up_4|NZ_CP012165.1_2104577_2105081_+	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	NA|148aa|up_3|NZ_CP012165.1_2105080_2105524_+	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein	NA|132aa|up_2|NZ_CP012165.1_2105855_2106251_+	PRK10040, PRK10040, hypothetical protein; Provisional	NA|67aa|up_1|NZ_CP012165.1_2106607_2106808_+	PRK02922, PRK02922, cell surface composition regulator GlgS	NA|157aa|up_0|NZ_CP012165.1_2106980_2107451_+	cd06470, ACD_IbpA-B_like, Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins	NA|458aa|down_0|NZ_CP012165.1_2107940_2109314_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_1|NZ_CP012165.1_2109539_2110181_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_2|NZ_CP012165.1_2110212_2111361_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|400aa|down_3|NZ_CP012165.1_2111659_2112859_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|304aa|down_4|NZ_CP012165.1_2112971_2113883_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP012165.1_2113900_2114926_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP012165.1_2115223_2115313_+	NA	NA|389aa|down_7|NZ_CP012165.1_2115474_2116641_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP012165.1_2116678_2117260_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|253aa|down_9|NZ_CP012165.1_2117382_2118141_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_000807405.2_ASM80740v4	NZ_CP012165	Enterobacter hormaechei subsp. xiangfangensis strain 34978 chromosome, complete genome	4	3540827-3540941	4	CRISPRCasFinder	no	DinG	cas3,csa3,DEDDh,WYL,DinG,RT	Type IV-A	TCCCTGTTTTCGGGGATAACCATCCCCGTTTT	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG,RT	NA|83aa|up_8|NZ_CP012165.1_3534522_3534771_-,NA|135aa|up_4|NZ_CP012165.1_3537988_3538393_-,NA|111aa|up_3|NZ_CP012165.1_3538392_3538725_-,NA|62aa|down_5|NZ_CP012165.1_3544766_3544952_+,NA|53aa|down_7|NZ_CP012165.1_3545266_3545425_+,NA|96aa|down_8|NZ_CP012165.1_3545510_3545798_+	NA|200aa|up_9|NZ_CP012165.1_3533886_3534486_-	pfam07105, DUF1367, Protein of unknown function (DUF1367)	NA|83aa|up_8|NZ_CP012165.1_3534522_3534771_-	NA	NA|78aa|up_7|NZ_CP012165.1_3534886_3535120_-	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional	NA|660aa|up_6|NZ_CP012165.1_3535263_3537243_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|249aa|up_5|NZ_CP012165.1_3537239_3537986_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|135aa|up_4|NZ_CP012165.1_3537988_3538393_-	NA	NA|111aa|up_3|NZ_CP012165.1_3538392_3538725_-	NA	NA|87aa|up_2|NZ_CP012165.1_3538721_3538982_-	pfam06163, DUF977, Bacterial protein of unknown function (DUF977)	NA|229aa|up_1|NZ_CP012165.1_3538985_3539672_-	pfam07789, DUF1627, Protein of unknown function (DUF1627)	NA|251aa|up_0|NZ_CP012165.1_3539688_3540441_-	PRK12377, PRK12377, putative replication protein; Provisional	NA|181aa|down_0|NZ_CP012165.1_3541757_3542300_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|78aa|down_1|NZ_CP012165.1_3542302_3542536_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|132aa|down_2|NZ_CP012165.1_3542639_3543035_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|359aa|down_3|NZ_CP012165.1_3543154_3544231_+	pfam13614, AAA_31, AAA domain	NA|70aa|down_4|NZ_CP012165.1_3544271_3544481_-	PRK10292, PRK10292, fumarate hydratase FumD	NA|62aa|down_5|NZ_CP012165.1_3544766_3544952_+	NA	NA|62aa|down_6|NZ_CP012165.1_3545071_3545257_+	pfam07358, DUF1482, Protein of unknown function (DUF1482)	NA|53aa|down_7|NZ_CP012165.1_3545266_3545425_+	NA	NA|96aa|down_8|NZ_CP012165.1_3545510_3545798_+	NA	NA|1023aa|down_9|NZ_CP012165.1_3545920_3548989_+	PRK09709, PRK09709, exodeoxyribonuclease VIII
GCF_000807405.2_ASM80740v4	NZ_CP012165	Enterobacter hormaechei subsp. xiangfangensis strain 34978 chromosome, complete genome	5	3658260-3658357	5	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG,RT	Orphan	TGCACTACCCCCTAGTGAATCTCCTGCACTAC	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG,RT	NA|197aa|up_9|NZ_CP012165.1_3649100_3649691_-,NA|233aa|up_7|NZ_CP012165.1_3651218_3651917_+,NA|98aa|down_2|NZ_CP012165.1_3659930_3660224_+,NA|74aa|down_4|NZ_CP012165.1_3660801_3661023_+,NA|136aa|down_5|NZ_CP012165.1_3661015_3661423_+,NA|138aa|down_6|NZ_CP012165.1_3661612_3662026_+,NA|95aa|down_7|NZ_CP012165.1_3662129_3662414_+,NA|70aa|down_8|NZ_CP012165.1_3662403_3662613_+	NA|197aa|up_9|NZ_CP012165.1_3649100_3649691_-	NA	NA|486aa|up_8|NZ_CP012165.1_3649672_3651130_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|233aa|up_7|NZ_CP012165.1_3651218_3651917_+	NA	NA|90aa|up_6|NZ_CP012165.1_3652166_3652436_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|210aa|up_5|NZ_CP012165.1_3652443_3653073_-	COG3179, COG3179, Predicted chitinase [General function prediction only]	NA|93aa|up_4|NZ_CP012165.1_3653072_3653351_-	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3	NA|130aa|up_3|NZ_CP012165.1_3653340_3653730_-	pfam16931, Phage_holin_8, Putative phage holin	NA|261aa|up_2|NZ_CP012165.1_3654726_3655509_-	pfam03589, Antiterm, Antitermination protein	NA|460aa|up_1|NZ_CP012165.1_3655536_3656916_-	TIGR00665, DnaB, replicative DNA helicase	NA|294aa|up_0|NZ_CP012165.1_3656912_3657794_-	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|72aa|down_0|NZ_CP012165.1_3658697_3658913_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|231aa|down_1|NZ_CP012165.1_3659066_3659759_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|98aa|down_2|NZ_CP012165.1_3659930_3660224_+	NA	NA|130aa|down_3|NZ_CP012165.1_3660305_3660695_+	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell	NA|74aa|down_4|NZ_CP012165.1_3660801_3661023_+	NA	NA|136aa|down_5|NZ_CP012165.1_3661015_3661423_+	NA	NA|138aa|down_6|NZ_CP012165.1_3661612_3662026_+	NA	NA|95aa|down_7|NZ_CP012165.1_3662129_3662414_+	NA	NA|70aa|down_8|NZ_CP012165.1_3662403_3662613_+	NA	NA|391aa|down_9|NZ_CP012165.1_3662567_3663740_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
