assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000807375.1_ASM80737v1	NZ_CP010050	Lactococcus lactis subsp. lactis strain S0, complete genome	1	526346-526434	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	GTCGCATTGAACTGACATGAATCT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA|113aa|up_1|NZ_CP010050.1_523575_523914_+,NA	NA|254aa|up_9|NZ_CP010050.1_506941_507703_+	cd01637, IMPase_like, Inositol-monophosphatase-like domains	NA|428aa|up_8|NZ_CP010050.1_507793_509077_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|64aa|up_7|NZ_CP010050.1_509076_509268_+	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|428aa|up_6|NZ_CP010050.1_509424_510708_+	PRK01490, tig, trigger factor; Provisional	NA|638aa|up_5|NZ_CP010050.1_517568_519482_+	PRK05667, dnaG, DNA primase; Validated	NA|448aa|up_4|NZ_CP010050.1_519558_520902_+	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|248aa|up_3|NZ_CP010050.1_521016_521760_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|434aa|up_2|NZ_CP010050.1_521990_523292_+	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|113aa|up_1|NZ_CP010050.1_523575_523914_+	NA	NA|749aa|up_0|NZ_CP010050.1_523964_526211_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|157aa|down_0|NZ_CP010050.1_526500_526971_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|338aa|down_1|NZ_CP010050.1_527143_528157_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|212aa|down_2|NZ_CP010050.1_528299_528935_-	PRK00150, def, peptide deformylase; Reviewed	NA|152aa|down_3|NZ_CP010050.1_529088_529544_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|693aa|down_4|NZ_CP010050.1_529554_531633_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|270aa|down_5|NZ_CP010050.1_531828_532638_+	cd13620, PBP2_GltS, Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily	NA|373aa|down_6|NZ_CP010050.1_532652_533771_+	COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]	NA|152aa|down_7|NZ_CP010050.1_533836_534292_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|251aa|down_8|NZ_CP010050.1_534566_535319_+	PRK06079, PRK06079, enoyl-[acyl-carrier-protein] reductase FabI	NA|321aa|down_9|NZ_CP010050.1_535689_536652_-	PRK02463, PRK02463, OxaA-like protein precursor; Provisional
GCF_000807375.1_ASM80737v1	NZ_CP010050	Lactococcus lactis subsp. lactis strain S0, complete genome	2	1179513-1179609	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	CTTCCTCTGGTCGCATTGAACTGAT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA|200aa|up_1|NZ_CP010050.1_1177737_1178337_+,NA|188aa|down_8|NZ_CP010050.1_1189441_1190005_+	NA|117aa|up_9|NZ_CP010050.1_1170006_1170357_+	COG1539, FolB, Dihydroneopterin aldolase [Coenzyme metabolism]	NA|350aa|up_8|NZ_CP010050.1_1170436_1171486_+	pfam01227, GTP_cyclohydroI, GTP cyclohydrolase I	NA|358aa|up_7|NZ_CP010050.1_1171482_1172556_+	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|166aa|up_6|NZ_CP010050.1_1172558_1173056_+	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|428aa|up_5|NZ_CP010050.1_1173074_1174358_+	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|213aa|up_4|NZ_CP010050.1_1174487_1175126_+	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|429aa|up_3|NZ_CP010050.1_1175301_1176588_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|297aa|up_2|NZ_CP010050.1_1176592_1177483_+	PRK01212, PRK01212, homoserine kinase; Provisional	NA|200aa|up_1|NZ_CP010050.1_1177737_1178337_+	NA	NA|300aa|up_0|NZ_CP010050.1_1178379_1179279_+	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase	NA|429aa|down_0|NZ_CP010050.1_1180002_1181289_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|263aa|down_1|NZ_CP010050.1_1181285_1182074_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]	NA|267aa|down_2|NZ_CP010050.1_1182075_1182876_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|356aa|down_3|NZ_CP010050.1_1182923_1183991_+	cd13663, PBP2_PotD_PotF_like_2, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold	NA|287aa|down_4|NZ_CP010050.1_1184365_1185226_+	TIGR01716, HTH-type_transcriptional_regulator_rgg, transcriptional activator, Rgg/GadR/MutR family, C-terminal domain	NA|753aa|down_5|NZ_CP010050.1_1185324_1187583_+	TIGR04479, bcpD_PhpK_rSAM, radical SAM P-methyltransferase, PhpK family	NA|409aa|down_6|NZ_CP010050.1_1187840_1189067_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|130aa|down_7|NZ_CP010050.1_1189089_1189479_+	pfam14478, DUF4430, Domain of unknown function (DUF4430)	NA|188aa|down_8|NZ_CP010050.1_1189441_1190005_+	NA	NA|116aa|down_9|NZ_CP010050.1_1190643_1190991_+	pfam18860, AbiJ_NTD3, AbiJ N-terminal domain 3
GCF_000807375.1_ASM80737v1	NZ_CP010050	Lactococcus lactis subsp. lactis strain S0, complete genome	3	1242409-1242521	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	TGCGATTGAATAGTGAGCATTTTAGTTGTAGATAAAAGAAC	41	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG	NA,NA	NA|201aa|up_9|NZ_CP010050.1_1233448_1234051_+	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|263aa|up_8|NZ_CP010050.1_1234047_1234836_+	COG3231, Aph, Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]	NA|203aa|up_7|NZ_CP010050.1_1234874_1235483_+	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|240aa|up_6|NZ_CP010050.1_1235483_1236203_+	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated	NA|260aa|up_5|NZ_CP010050.1_1236192_1236972_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|213aa|up_4|NZ_CP010050.1_1236968_1237607_+	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA|270aa|up_3|NZ_CP010050.1_1237607_1238417_+	TIGR01856, Probable_histidinol-phosphatase, histidinol phosphate phosphatase, HisJ family	NA|320aa|up_2|NZ_CP010050.1_1238430_1239390_-	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|514aa|up_1|NZ_CP010050.1_1239815_1241357_+	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|346aa|up_0|NZ_CP010050.1_1241368_1242406_+	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|461aa|down_0|NZ_CP010050.1_1242624_1244007_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|192aa|down_1|NZ_CP010050.1_1244026_1244602_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|260aa|down_2|NZ_CP010050.1_1244615_1245395_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|571aa|down_3|NZ_CP010050.1_1245517_1247230_+	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|576aa|down_4|NZ_CP010050.1_1247240_1248968_+	PRK07282, PRK07282, acetolactate synthase large subunit	NA|159aa|down_5|NZ_CP010050.1_1248960_1249437_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|341aa|down_6|NZ_CP010050.1_1249482_1250505_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|417aa|down_7|NZ_CP010050.1_1250560_1251811_+	PRK08639, PRK08639, threonine dehydratase; Validated	NA|237aa|down_8|NZ_CP010050.1_1251926_1252637_+	TIGR01252, Alpha-acetolactate_decarboxylase, alpha-acetolactate decarboxylase	NA|127aa|down_9|NZ_CP010050.1_1252677_1253058_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase
GCF_000807375.1_ASM80737v1	NZ_CP010050	Lactococcus lactis subsp. lactis strain S0, complete genome	4	1954645-1954800	1	PILER-CR	no		cas3,DEDDh,csa3,DinG	Orphan	TATGACGTAAAAATGTTGTATTT	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,csa3,DinG	NA,NA|78aa|down_1|NZ_CP010050.1_1956768_1957002_+,NA|34aa|down_7|NZ_CP010050.1_1962007_1962109_-	NA|249aa|up_9|NZ_CP010050.1_1940896_1941643_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|601aa|up_8|NZ_CP010050.1_1941845_1943648_-	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains	NA|295aa|up_7|NZ_CP010050.1_1943757_1944642_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|320aa|up_6|NZ_CP010050.1_1944651_1945611_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|320aa|up_5|NZ_CP010050.1_1945591_1946551_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|339aa|up_4|NZ_CP010050.1_1946547_1947564_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|230aa|up_3|NZ_CP010050.1_1948240_1948930_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|182aa|up_2|NZ_CP010050.1_1949015_1949561_-	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|76aa|up_1|NZ_CP010050.1_1949609_1949837_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|621aa|up_0|NZ_CP010050.1_1950542_1952405_-	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|451aa|down_0|NZ_CP010050.1_1954904_1956257_+	pfam01051, Rep_3, Initiator Replication protein	NA|78aa|down_1|NZ_CP010050.1_1956768_1957002_+	NA	NA|253aa|down_2|NZ_CP010050.1_1957011_1957770_+	pfam13614, AAA_31, AAA domain	NA|243aa|down_3|NZ_CP010050.1_1957773_1958502_+	cd16406, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems	NA|237aa|down_4|NZ_CP010050.1_1958642_1959353_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|250aa|down_5|NZ_CP010050.1_1959547_1960297_+	TIGR01528, Protein_pnuC	NA|194aa|down_6|NZ_CP010050.1_1961299_1961881_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|34aa|down_7|NZ_CP010050.1_1962007_1962109_-	NA	NA|256aa|down_8|NZ_CP010050.1_1962377_1963145_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|142aa|down_9|NZ_CP010050.1_1963641_1964067_+	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed
